Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010545g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.0e-66 255.0 123 100.0
Nitab4.5_0003537g0080 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.1e-57 226.5 123 86.2
Nitab4.5_0006281g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.1e-36 156.8 123 67.5
Nitab4.5_0028743g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.6e-35 152.9 123 65.9
Nitab4.5_0004979g0050 Nicotiana tabacum HOM05D002327 ORTHO05D002306 6.9e-31 137.5 78 83.3
Nitab4.5_0002242g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.2e-29 132.5 123 51.2
Nitab4.5_0006131g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.9e-29 132.1 68 91.2
Nitab4.5_0000157g0300 Nicotiana tabacum HOM05D002327 ORTHO05D002306 6.5e-29 131.0 121 46.3
Nitab4.5_0009273g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.1e-28 130.2 122 50.8
Nitab4.5_0005037g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.5e-28 127.9 83 72.3
Peaxi162Scf00244g00139 Petunia axillaris HOM05D002327 ORTHO05D002306 7.1e-28 127.5 122 47.5
Peaxi162Scf00023g00421 Petunia axillaris HOM05D002327 ORTHO05D002306 1.8e-26 122.9 123 51.2
Nitab4.5_0006834g0040 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.9e-25 119.4 121 44.6
Nitab4.5_0000960g0130 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.5e-25 119.0 62 87.1
Nitab4.5_0001827g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.7e-25 117.9 107 51.4
Peaxi162Scf01208g00143 Petunia axillaris HOM05D002327 ORTHO05D002306 5.7e-25 117.9 123 46.3
Peaxi162Scf00519g00619 Petunia axillaris HOM05D002327 ORTHO05D002306 9.7e-25 117.1 122 45.1
Peaxi162Scf00294g01116 Petunia axillaris HOM05D002327 ORTHO05D002306 1.6e-24 116.3 123 46.3
PGSC0003DMG400037233 Solanum tuberosum HOM05D002327 ORTHO05D002306 2.2e-24 115.9 118 42.4
Nitab4.5_0003442g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.8e-24 115.5 121 43.0
Peaxi162Scf00058g00613 Petunia axillaris HOM05D002327 ORTHO05D002306 2.8e-24 115.5 123 45.5
Peaxi162Scf01326g00115 Petunia axillaris HOM05D002327 ORTHO05D002306 2.8e-24 115.5 123 48.8
Nitab4.5_0000699g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 6.3e-24 114.4 63 82.5
Nitab4.5_0000157g0340 Nicotiana tabacum HOM05D002327 ORTHO05D002306 8.2e-24 114.0 96 49.0
PGSC0003DMG400018198 Solanum tuberosum HOM05D002327 ORTHO05D002306 6.9e-23 110.9 118 41.5
Nitab4.5_0001182g0080 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.5e-22 109.8 121 42.1
Nitab4.5_0027050g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 7.6e-22 107.5 102 45.1
PGSC0003DMG400037214 Solanum tuberosum HOM05D002327 ORTHO05D002306 1.7e-21 106.3 123 37.4
Nitab4.5_0002943g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.2e-21 105.9 117 46.2
Nitab4.5_0003038g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.2e-21 105.9 123 46.3
PGSC0003DMG400045585 Solanum tuberosum HOM05D002327 ORTHO05D002306 2.9e-21 105.5 123 38.2
Nitab4.5_0000135g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.0e-21 104.8 52 90.4
Peaxi162Scf00045g02132 Petunia axillaris HOM05D002327 ORTHO05D002306 5.0e-21 104.8 115 42.6
Nitab4.5_0008006g0080 Nicotiana tabacum HOM05D002327 ORTHO05D002306 8.5e-21 104.0 123 46.3
Nitab4.5_0008566g0070 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.1e-20 103.6 123 46.3
Nitab4.5_0003944g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.4e-20 103.2 123 39.0
Nitab4.5_0004217g0040 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.9e-20 102.8 123 39.8
Nitab4.5_0006944g0040 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.2e-20 102.1 123 43.1
Nitab4.5_0001833g0050 Nicotiana tabacum HOM05D002327 ORTHO05D002306 7.2e-20 100.9 88 53.4
Peaxi162Scf00152g00520 Petunia axillaris HOM05D002327 ORTHO05D002306 9.3e-20 100.5 115 40.0
PGSC0003DMG400040732 Solanum tuberosum HOM05D002327 ORTHO05D002306 9.3e-20 100.5 123 37.4
Nitab4.5_0002319g0050 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.1e-19 99.4 123 44.7
Nitab4.5_0000574g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 6.1e-19 97.8 123 43.9
Nitab4.5_0014898g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 6.1e-19 97.8 58 79.3
Nitab4.5_0003498g0070 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.0e-18 97.1 119 40.3
Nitab4.5_0007182g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.0e-18 97.1 96 43.8
Nitab4.5_0003059g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.8e-18 96.3 52 82.7
Nitab4.5_0000541g0120 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.3e-18 95.9 123 43.9
Peaxi162Scf00205g01132 Petunia axillaris HOM05D002327 ORTHO05D002306 5.1e-18 94.7 123 35.0
Nitab4.5_0002393g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 8.8e-18 94.0 123 42.3
Nitab4.5_0004970g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 8.8e-18 94.0 123 43.1
Nitab4.5_0010634g0050 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.1e-17 93.6 123 43.1
Peaxi162Scf00179g00542 Petunia axillaris HOM05D002327 ORTHO05D002306 1.1e-17 93.6 105 41.0
PGSC0003DMG400044885 Solanum tuberosum HOM05D002327 ORTHO05D002306 1.1e-17 93.6 123 35.8
Nitab4.5_0001204g0090 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.5e-17 93.2 49 83.7
Nitab4.5_0002656g0080 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.5e-17 92.4 117 45.3
Peaxi162Scf00013g03332 Petunia axillaris HOM05D002327 ORTHO05D002306 2.5e-17 92.4 123 34.1
Peaxi162Scf00872g00026 Petunia axillaris HOM05D002327 ORTHO05D002306 2.5e-17 92.4 123 34.1
Peaxi162Scf01194g00139 Petunia axillaris HOM05D002327 ORTHO05D002306 3.3e-17 92.0 123 33.3
Peaxi162Scf00229g01214 Petunia axillaris HOM05D002327 ORTHO05D002306 4.3e-17 91.7 123 33.3
Peaxi162Scf00351g00326 Petunia axillaris HOM05D002327 ORTHO05D002306 4.3e-17 91.7 123 33.3
Nitab4.5_0007782g0090 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.7e-17 91.3 123 45.5
Peaxi162Scf00058g02910 Petunia axillaris HOM05D002327 ORTHO05D002306 7.4e-17 90.9 123 32.5
Peaxi162Scf00248g00213 Petunia axillaris HOM05D002327 ORTHO05D002306 7.4e-17 90.9 123 34.1
Peaxi162Scf00271g00110 Petunia axillaris HOM05D002327 ORTHO05D002306 7.4e-17 90.9 123 32.5
Peaxi162Scf01365g00039 Petunia axillaris HOM05D002327 ORTHO05D002306 7.4e-17 90.9 123 33.3
Peaxi162Scf00252g00819 Petunia axillaris HOM05D002327 ORTHO05D002306 1.3e-16 90.1 121 33.1
Peaxi162Scf01481g00035 Petunia axillaris HOM05D002327 ORTHO05D002306 1.3e-16 90.1 123 33.3
Nitab4.5_0001894g0070 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.7e-16 89.7 116 43.1
Peaxi162Scf00053g00910 Petunia axillaris HOM05D002327 ORTHO05D002306 2.2e-16 89.4 123 33.3
Peaxi162Scf00132g00236 Petunia axillaris HOM05D002327 ORTHO05D002306 2.8e-16 89.0 105 39.0
Peaxi162Scf00334g00041 Petunia axillaris HOM05D002327 ORTHO05D002306 2.8e-16 89.0 120 32.5
Nitab4.5_0011138g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.7e-16 88.6 123 44.7
Peaxi162Scf00611g00127 Petunia axillaris HOM05D002327 ORTHO05D002306 4.8e-16 88.2 123 31.7
Peaxi162Scf00001g00323 Petunia axillaris HOM05D002327 ORTHO05D002306 8.2e-16 87.4 123 39.8
Peaxi162Scf00441g00415 Petunia axillaris HOM05D002327 ORTHO05D002306 8.2e-16 87.4 123 39.8
Peaxi162Scf00556g00517 Petunia axillaris HOM05D002327 ORTHO05D002306 8.2e-16 87.4 123 39.8
Peaxi162Scf00401g00528 Petunia axillaris HOM05D002327 ORTHO05D002306 1.1e-15 87.0 105 39.0
Nitab4.5_0007384g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.4e-15 86.7 123 44.7
Peaxi162Scf00129g01342 Petunia axillaris HOM05D002327 ORTHO05D002306 3.1e-15 85.5 123 39.8
Peaxi162Scf00243g00211 Petunia axillaris HOM05D002327 ORTHO05D002306 4.1e-15 85.1 125 32.0
Nitab4.5_0001441g0150 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.3e-15 84.7 123 43.1
Peaxi162Scf00692g00118 Petunia axillaris HOM05D002327 ORTHO05D002306 9.1e-15 84.0 112 36.6
Nitab4.5_0004602g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.2e-14 83.6 102 44.1
Nitab4.5_0007758g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.5e-14 83.2 120 38.3
Peaxi162Scf00096g01841 Petunia axillaris HOM05D002327 ORTHO05D002306 1.5e-14 83.2 85 45.9
Peaxi162Scf00618g00014 Petunia axillaris HOM05D002327 ORTHO05D002306 5.9e-14 81.3 123 31.7
Peaxi162Scf00367g00011 Petunia axillaris HOM05D002327 ORTHO05D002306 7.7e-14 80.9 121 29.8
Nitab4.5_0006389g0040 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.0e-13 80.5 123 39.0
PGSC0003DMG400041730 Solanum tuberosum HOM05D002327 ORTHO05D002306 1.3e-13 80.1 98 36.7
Peaxi162Scf00304g00230 Petunia axillaris HOM05D002169 ORTHO05D006927 1.4e-12 76.6 100 35.0
Peaxi162Scf00412g00054 Petunia axillaris HOM05D002169 ORTHO05D006927 1.4e-12 76.6 105 32.4
Peaxi162Scf00264g00423 Petunia axillaris HOM05D002327 ORTHO05D002306 1.9e-12 76.3 110 31.8
Nitab4.5_0000108g0280 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.5e-12 75.9 120 33.3
Peaxi162Scf00439g00524 Petunia axillaris HOM05D002327 ORTHO05D002306 4.2e-12 75.1 123 29.3
Nitab4.5_0007165g0040 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.5e-12 74.7 90 42.2
Peaxi162Scf00360g00123 Petunia axillaris HOM05D002327 ORTHO05D002306 9.4e-12 73.9 121 32.2
Medtr0030s0160 Medicago truncatula HOM05D002327 ORTHO05D002306 1.6e-11 73.2 89 39.3
Peaxi162Scf00120g01533 Petunia axillaris HOM05D002327 ORTHO05D002306 1.6e-11 73.2 86 36.0
Peaxi162Scf00737g00005 Petunia axillaris HOM05D002327 ORTHO05D002306 1.6e-11 73.2 95 34.7
Peaxi162Scf00120g00068 Petunia axillaris HOM05D002327 ORTHO05D002306 2.1e-11 72.8 90 38.9
Nitab4.5_0000082g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 2.7e-11 72.4 95 40.0
Nitab4.5_0003910g0050 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.6e-11 72.0 65 44.6
Nitab4.5_0011344g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.6e-11 72.0 114 34.2
Nitab4.5_0004001g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 4.7e-11 71.6 79 45.6
Nitab4.5_0009762g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 6.1e-11 71.2 120 30.8
Peaxi162Scf00248g00311 Petunia axillaris HOM05D002327 ORTHO05D002306 7.9e-11 70.9 87 32.2
Peaxi162Scf00353g00734 Petunia axillaris HOM05D002327 ORTHO05D002306 7.9e-11 70.9 87 32.2
Peaxi162Scf01081g00020 Petunia axillaris HOM05D002327 ORTHO05D002306 1.8e-10 69.7 87 31.0
Peaxi162Scf00114g00711 Petunia axillaris HOM05D002327 ORTHO05D002306 3.9e-10 68.6 123 32.5
Nitab4.5_0002901g0030 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.1e-10 68.2 67 46.3
Nitab4.5_0001603g0130 Nicotiana tabacum HOM05D002327 ORTHO05D002306 6.7e-10 67.8 103 37.9
Peaxi162Scf00593g00025 Petunia axillaris HOM05D002327 ORTHO05D002306 6.7e-10 67.8 121 26.4
Nitab4.5_0004607g0050 Nicotiana tabacum HOM05D002327 ORTHO05D002306 8.8e-10 67.4 70 45.7
PGSC0003DMG400038931 Solanum tuberosum HOM05D002327 ORTHO05D002306 8.8e-10 67.4 77 37.7
Peaxi162Scf00531g00007 Petunia axillaris HOM05D002327 ORTHO05D002306 1.1e-09 67.0 59 50.8
Peaxi162Scf00008g00811 Petunia axillaris HOM05D002327 ORTHO05D002306 2.0e-09 66.2 107 29.9
Peaxi162Scf00098g00034 Petunia axillaris HOM05D002327 ORTHO05D002306 2.0e-09 66.2 112 32.1
Peaxi162Scf00634g00114 Petunia axillaris HOM05D002327 ORTHO05D002306 2.0e-09 66.2 112 28.6
Nitab4.5_0000389g0040 Nicotiana tabacum HOM05D002327 ORTHO05D002306 4.4e-09 65.1 57 52.6
Os03g0214100 Oryza sativa ssp. japonica HOM05D000824 ORTHO05D003555 7.4e-09 64.3 102 28.4
Nitab4.5_0006946g0050 Nicotiana tabacum HOM05D002327 ORTHO05D002306 9.7e-09 63.9 69 40.6
Gohir.A03G070300 Gossypium hirsutum HOM05D000824 ORTHO05D003555 1.3e-08 63.5 106 26.4
Gohir.D03G096700 Gossypium hirsutum HOM05D000824 ORTHO05D003555 1.3e-08 63.5 106 26.4
Gorai.003G101500 Gossypium raimondii HOM05D000824 ORTHO05D003555 1.3e-08 63.5 106 26.4
Peaxi162Scf00016g02525 Petunia axillaris HOM05D000007 ORTHO05D000039 1.3e-08 63.5 66 51.5
Nitab4.5_0000511g0100 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.7e-08 63.2 73 47.9
Nitab4.5_0000804g0200 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.7e-08 63.2 121 28.9
BcaC04g23467 Brassica carinata HOM05D000824 ORTHO05D003555 3.7e-08 62.0 106 26.4
C09p08030 Brassica napus HOM05D000824 ORTHO05D003555 3.7e-08 62.0 106 26.4
BolC9t53717H Brassica oleracea HOM05D000824 ORTHO05D003555 3.7e-08 62.0 106 26.4
A09p07190 Brassica napus HOM05D000824 ORTHO05D003555 6.3e-08 61.2 106 26.4
Dinv26272 Davidia involucrata HOM05D000824 ORTHO05D002306 6.3e-08 61.2 95 28.4
Carub.0008s2169 Capsella rubella HOM05D000824 ORTHO05D003555 1.1e-07 60.5 106 25.5
CARHR274710 Cardamine hirsuta HOM05D000824 ORTHO05D003555 1.1e-07 60.5 106 25.5
Peaxi162Scf00158g00189 Petunia axillaris HOM05D002327 ORTHO05D002306 1.1e-07 60.5 106 34.0
AL8G37660 Arabidopsis lyrata HOM05D000824 ORTHO05D003555 1.4e-07 60.1 106 25.5
A03p46710 Brassica napus HOM05D000824 ORTHO05D003555 1.4e-07 60.1 106 25.5
BraA03t13794Z Brassica rapa HOM05D000824 ORTHO05D003555 1.4e-07 60.1 106 25.5
AT5G61000 Arabidopsis thaliana HOM05D000824 ORTHO05D003555 1.8e-07 59.7 106 25.5
Aa31LG3G18510 Aethionema arabicum HOM05D000824 ORTHO05D003555 2.4e-07 59.3 106 25.5
Dinv11468 Davidia involucrata HOM05D002327 ORTHO05D002306 2.4e-07 59.3 95 27.4
Peaxi162Scf00096g01310 Petunia axillaris HOM05D002327 ORTHO05D002306 2.4e-07 59.3 54 46.3
Peaxi162Scf00485g00061 Petunia axillaris HOM05D002327 ORTHO05D002306 2.4e-07 59.3 73 41.1
Sp2g24310 Schrenkiella parvula HOM05D000824 ORTHO05D003555 2.4e-07 59.3 106 25.5
BcaNung06900 Brassica carinata HOM05D000824 ORTHO05D003555 3.1e-07 58.9 106 24.5
C07p44760 Brassica napus HOM05D000824 ORTHO05D003555 3.1e-07 58.9 106 24.5
Thhalv10003822m.g Eutrema salsugineum HOM05D000824 ORTHO05D003555 3.1e-07 58.9 106 24.5
Nitab4.5_0005313g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.1e-07 58.9 55 47.3
Peaxi162Scf00213g01516 Petunia axillaris HOM05D002327 ORTHO05D002306 3.1e-07 58.9 118 29.7
Peaxi162Scf00203g00610 Petunia axillaris HOM05D002327 ORTHO05D002306 4.1e-07 58.5 124 25.0
Dinv10762 Davidia involucrata HOM05D002327 ORTHO05D002306 5.3e-07 58.2 95 27.4
Dinv22755 Davidia involucrata HOM05D000824 ORTHO05D002306 7.0e-07 57.8 95 26.3
Nitab4.5_0001041g0070 Nicotiana tabacum HOM05D002327 ORTHO05D002306 7.0e-07 57.8 113 31.9
BraA09t36368Z Brassica rapa HOM05D000824 ORTHO05D003555 9.1e-07 57.4 106 26.4
DCAR_011568 Daucus carota HOM05D000824 ORTHO05D003555 9.1e-07 57.4 102 25.5
DCAR_011569 Daucus carota HOM05D000824 ORTHO05D003555 9.1e-07 57.4 102 25.5
DCAR_023168 Daucus carota HOM05D000824 ORTHO05D003555 9.1e-07 57.4 105 24.8
Nitab4.5_0000965g0020 Nicotiana tabacum HOM05D002327 ORTHO05D002306 9.1e-07 57.4 98 34.7
Nitab4.5_0000511g0090 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.2e-06 57.0 42 64.3
SEGI_00714 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 1.5e-06 56.6 95 26.3
Nitab4.5_0003658g0110 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.4e-06 55.5 48 54.2
BcaB02g09847 Brassica carinata HOM05D000824 ORTHO05D021691 5.9e-06 54.7 106 25.5
Peaxi162Scf00005g00614 Petunia axillaris HOM05D002327 ORTHO05D002306 5.9e-06 54.7 65 40.0
Nitab4.5_0004499g0060 Nicotiana tabacum HOM05D002327 ORTHO05D002306 7.7e-06 54.3 57 45.6


User provided reference genes

Program Settings