Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009615g0040 Nicotiana tabacum HOM05D006106 ORTHO05D007662 1.9e-144 515.8 257 100.0
Nitab4.5_0000586g0120 Nicotiana tabacum HOM05D006106 ORTHO05D007662 1.8e-97 359.8 257 75.9
Solyc04g015950.3 Solanum lycopersicum HOM05D006106 ORTHO05D007662 1.7e-87 326.6 257 68.9
Peaxi162Scf00130g00324 Petunia axillaris HOM05D006106 ORTHO05D007662 7.0e-86 321.2 257 66.9
Sopen04g007960 Solanum pennellii HOM05D006106 ORTHO05D007662 6.4e-79 298.1 257 64.2
Hma1.2p1_1041F.1_g251060 Hydrangea macrophylla HOM05D006106 ORTHO05D007662 2.2e-71 273.1 246 54.5
Cc06_g17630 Coffea canephora HOM05D006106 ORTHO05D007662 4.6e-69 265.4 252 54.8
Eucgr.A02342 Eucalyptus grandis HOM05D006106 ORTHO05D007662 3.9e-68 262.3 244 53.3
DCAR_009064 Daucus carota HOM05D006106 ORTHO05D007662 2.5e-59 233.0 236 50.4
Actinidia39218 Actinidia chinensis HOM05D006106 ORTHO05D007662 1.3e-58 230.7 182 63.2
Rhsim03G0026900 Rhododendron simsii HOM05D006106 ORTHO05D007662 1.3e-58 230.7 251 48.6
SGA_v2.0_scaffold105G30404 Striga asiatica HOM05D001739 ORTHO05D006605 1.4e-57 227.3 256 47.7
Haze_19847 Corylus avellana HOM05D006106 ORTHO05D007662 7.6e-56 221.5 244 47.1
CSS0036472 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 2.2e-55 219.9 165 64.2
Lju124C42G9 Lonicera japonica HOM05D006106 ORTHO05D007662 2.2e-55 219.9 169 61.5
CSS0045921 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 3.8e-55 219.2 162 64.8
Nn7g36310 Nelumbo nucifera HOM05D006106 ORTHO05D007662 2.4e-54 216.5 162 64.2
GSVIVG01033271001 Vitis vinifera HOM05D006106 ORTHO05D007662 1.6e-53 213.8 167 61.1
Migut.J01752 Erythranthe guttata HOM05D006106 ORTHO05D007662 3.5e-53 212.6 167 60.5
Dinv12500 Davidia involucrata HOM05D006106 ORTHO05D007662 7.9e-53 211.5 167 59.9
TWI74G1340 Tripterygium wilfordii HOM05D006106 ORTHO05D007662 5.1e-52 208.8 150 65.3
CiPaw.10G034000 Carya illinoinensis HOM05D006106 ORTHO05D007662 2.5e-51 206.5 160 61.2
A05p02440 Brassica napus HOM05D006106 ORTHO05D007662 7.4e-51 204.9 246 43.1
Ciclev10004305m.g Citrus clementina HOM05D006106 ORTHO05D007662 9.6e-51 204.5 163 60.1
Manes.08G051400 Manihot esculenta HOM05D006106 ORTHO05D007662 1.3e-50 204.1 161 59.0
Aa31LG1G23740 Aethionema arabicum HOM05D006106 ORTHO05D007662 3.7e-50 202.6 249 44.6
C04p02890 Brassica napus HOM05D006106 ORTHO05D007662 3.7e-50 202.6 245 42.9
BolC4t21929H Brassica oleracea HOM05D006106 ORTHO05D007662 3.7e-50 202.6 245 42.9
BraA05t19238Z Brassica rapa HOM05D006106 ORTHO05D007662 3.7e-50 202.6 244 43.0
Sabra06G0034800 Salix brachista HOM05D006106 ORTHO05D007662 3.7e-50 202.6 158 61.4
Cfa016809 Carpinus fangiana HOM05D001739 ORTHO05D006605 4.8e-50 202.2 160 59.4
QL07p000909 Quercus lobata HOM05D006106 ORTHO05D007662 6.2e-50 201.8 248 42.7
Potri.006G049900 Populus trichocarpa HOM05D006106 ORTHO05D007662 1.4e-49 200.7 159 59.7
vmacro07842 Vaccinium macrocarpon HOM05D006106 ORTHO05D007662 1.2e-48 197.6 239 45.2
PSO384G4415 Papaver somniferum HOM05D006106 ORTHO05D007662 1.5e-48 197.2 170 55.9
Thecc.05G152200 Theobroma cacao HOM05D006106 ORTHO05D007662 2.0e-48 196.8 167 55.1
Atru.chr1.1113 Acer truncatum HOM05D006106 ORTHO05D007662 4.5e-48 195.7 160 59.4
ECA247G0166 Erigeron canadensis HOM05D001739 ORTHO05D006605 4.5e-48 195.7 159 58.5
AUR62026047 Chenopodium quinoa HOM05D006106 ORTHO05D007662 5.8e-48 195.3 242 42.6
Lsat_1_v5_gn_9_30580 Lactuca sativa HOM05D006106 ORTHO05D007662 7.6e-48 194.9 156 59.0
Duzib128G0400 Durio zibethinus HOM05D006106 ORTHO05D007662 9.9e-48 194.5 167 55.1
Prupe.7G058400 Prunus persica HOM05D006106 ORTHO05D007662 1.7e-47 193.7 163 54.6
Cpa.g.sc224.2 Carica papaya HOM05D006106 ORTHO05D007662 2.2e-47 193.4 154 59.1
Glyma.03G136200 Glycine max HOM05D006106 ORTHO05D007662 4.9e-47 192.2 157 58.0
Sc13g0001690 Simmondsia chinensis HOM05D006106 ORTHO05D007662 6.4e-47 191.8 165 55.8
Lj1g0017753 Lotus japonicus HOM05D006106 ORTHO05D007662 8.4e-47 191.4 159 57.2
Phvul.001G131500 Phaseolus vulgaris HOM05D006106 ORTHO05D007662 8.4e-47 191.4 147 61.2
HanXRQChr10g0296661 Helianthus annuus HOM05D006106 ORTHO05D007662 1.1e-46 191.0 163 57.1
arahy.Tifrunner.gnm1.ann1.4I0CBR Arachis hypogaea HOM05D006106 ORTHO05D007662 2.4e-46 189.9 243 42.0
FAN05G2558 Fragaria x ananassa HOM05D006106 ORTHO05D007662 2.4e-46 189.9 163 54.6
PGR004G1513 Punica granatum HOM05D006106 ORTHO05D007662 4.2e-46 189.1 145 62.1
HPP92_011279 Vanilla planifolia HOM05D006106 ORTHO05D007662 7.1e-46 188.3 167 50.9
FvH4_6g24060 Fragaria vesca HOM05D006106 ORTHO05D007662 1.2e-45 187.6 163 54.0
FAN14G5662 Fragaria x ananassa HOM05D006106 ORTHO05D007662 1.2e-45 187.6 163 54.0
BcaNung06815 Brassica carinata HOM05D006106 ORTHO05D007662 2.1e-45 186.8 161 52.8
MD12G1080100 Malus domestica HOM05D006106 ORTHO05D007662 2.1e-45 186.8 156 56.4
ClCG10G015760 Citrullus lanatus HOM05D006106 ORTHO05D007662 2.7e-45 186.4 163 55.2
CsaV3_3G040680 Cucumis sativus L. HOM05D006106 ORTHO05D007662 2.7e-45 186.4 153 58.2
VMungo1383G2820 Vigna mungo HOM05D006106 ORTHO05D007662 4.6e-45 185.7 146 59.6
Thhalv10016262m.g Eutrema salsugineum HOM05D006106 ORTHO05D007662 6.0e-45 185.3 161 52.2
Gohir.D05G352075 Gossypium hirsutum HOM05D006106 ORTHO05D007662 7.9e-45 184.9 156 56.4
Gohir.A04G032500 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.8e-44 183.7 156 55.8
Sp4g23970 Schrenkiella parvula HOM05D006106 ORTHO05D007662 1.8e-44 183.7 161 52.8
AUR62024458 Chenopodium quinoa HOM05D006106 ORTHO05D007662 2.3e-44 183.3 160 55.6
EL10Ac3g07098 Beta vulgaris HOM05D006106 ORTHO05D007662 3.0e-44 183.0 254 39.8
MELO3C009803.2 Cucumis melo HOM05D006106 ORTHO05D007662 3.0e-44 183.0 148 58.8
Gohir.D05G383766 Gossypium hirsutum HOM05D006106 ORTHO05D007662 3.0e-44 183.0 156 55.8
RcHm_v2.0_Chr3g0482651 Rosa chinensis HOM05D006106 ORTHO05D007662 3.0e-44 183.0 166 50.6
Psat3g074120 Pisum sativum HOM05D006106 ORTHO05D007662 3.9e-44 182.6 162 57.4
Ca_08448_v3 Cicer arietinum L. HOM05D006106 ORTHO05D007662 5.1e-44 182.2 148 57.4
Carub.0004s2400 Capsella rubella HOM05D006106 ORTHO05D007662 6.7e-44 181.8 159 50.3
THA.LOC104804858 Tarenaya hassleriana HOM05D006106 ORTHO05D007662 8.7e-44 181.4 159 50.3
AT2G41720 Arabidopsis thaliana HOM05D006106 ORTHO05D007662 2.5e-43 179.9 161 51.6
AL4G40030 Arabidopsis lyrata HOM05D006106 ORTHO05D007662 7.4e-43 178.3 161 49.1
arahy.Tifrunner.gnm1.ann1.HSF0DX Arachis hypogaea HOM05D006106 ORTHO05D007662 7.4e-43 178.3 148 56.8
Aqoxy1G00233 Aquilegia oxysepala HOM05D006106 ORTHO05D007662 1.1e-41 174.5 156 53.2
Hund24702 Selenicereus undatus HOM05D006106 ORTHO05D007662 2.4e-41 173.3 245 36.7
Medtr7g091410 Medicago truncatula HOM05D006106 ORTHO05D007662 2.6e-40 169.9 147 55.1
ATR0188G017 Amborella trichopoda HOM05D006106 ORTHO05D007662 4.5e-40 169.1 170 48.2
Gorai.009G450600 Gossypium raimondii HOM05D006106 ORTHO05D007662 4.5e-40 169.1 188 46.8
CARHR136820 Cardamine hirsuta HOM05D006106 ORTHO05D007662 1.3e-39 167.5 161 49.7
Gorai.009G383700 Gossypium raimondii HOM05D006106 ORTHO05D007662 2.9e-39 166.4 188 46.3
TPR.G3692 Trifolium pratense HOM05D006106 ORTHO05D007662 3.8e-39 166.0 139 56.8
MBI17_g23173_MAGBIO Magnolia biondii HOM05D006106 ORTHO05D007662 5.5e-38 162.2 120 62.5
PSO339G0809 Papaver somniferum HOM05D006106 ORTHO05D007662 3.0e-36 156.4 115 64.3
TAR623G1698 Trochodendron aralioides HOM05D006106 ORTHO05D007662 5.7e-35 152.1 115 58.3
BcaC02g12786 Brassica carinata HOM05D000138 ORTHO05D007692 1.6e-34 150.6 198 39.4
Ah.04g151600 Amaranthus hybridus HOM05D006106 ORTHO05D007662 1.1e-33 147.9 123 56.1
Os07g0213300 Oryza sativa ssp. japonica HOM05D006106 ORTHO05D007662 9.0e-33 144.8 143 45.5
Zm00001eb325040 Zea mays HOM05D006106 ORTHO05D007662 1.5e-32 144.1 149 43.0
CDE08G0364 Ceratophyllum demersum HOM05D006106 ORTHO05D007662 7.9e-29 131.7 118 52.5
Ca_15068_v3 Cicer arietinum L. HOM05D006106 ORTHO05D007662 1.3e-26 124.4 99 57.6
Oeu008911.1 Olea europaea HOM05D006106 ORTHO05D007662 3.9e-20 102.8 252 31.3
MELO3C030027.2 Cucumis melo HOM05D006106 ORTHO05D007662 3.3e-19 99.8 87 52.9
HPP92_011301 Vanilla planifolia HOM05D006106 ORTHO05D007662 6.3e-18 95.5 77 51.9
MELO3C031816.2 Cucumis melo HOM05D006106 ORTHO05D007662 1.5e-16 90.9 89 48.3
Sed0021985 Sechium edule HOM05D006106 ORTHO05D007662 4.5e-16 89.4 81 53.1
Rhsim09G0172900 Rhododendron simsii HOM05D006106 ORTHO05D007662 1.0e-15 88.2 117 41.0
CSS0047930 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 1.8e-12 77.4 100 41.0
Lalb_Chr01g0017341 Lupinus albus HOM05D006106 ORTHO05D007662 8.8e-12 75.1 79 48.1
COL.COLO4_28306 Corchorus olitorius HOM05D006106 ORTHO05D007662 2.2e-10 70.5 116 36.2
TAR623G1683 Trochodendron aralioides HOM05D006106 ORTHO05D007662 8.2e-10 68.6 46 63.0
AagrBONN_evm.TU.Sc2ySwM_344.4225 Anthoceros agrestis HOM05D006106 ORTHO05D007662 2.2e-07 60.5 79 31.6
Mapoly0043s0117 Marchantia polymorpha HOM05D006106 ORTHO05D007662 6.5e-07 58.9 119 26.1
Rhsim03G0026000 Rhododendron simsii HOM05D001739 ORTHO05D007662 9.4e-06 55.1 44 52.3


User provided reference genes

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