Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009438g0040 Nicotiana tabacum HOM05D009916 ORTHO05D014164 1.0e-56 223.0 99 100.0
Nitab4.5_0000417g0090 Nicotiana tabacum HOM05D009916 ORTHO05D000022 7.5e-28 127.1 83 62.7
Nitab4.5_0001568g0010 Nicotiana tabacum HOM05D009916 ORTHO05D014164 3.1e-21 105.1 80 51.2
Nitab4.5_0005970g0030 Nicotiana tabacum HOM05D000032 ORTHO05D006669 4.9e-19 97.8 80 42.5
Nitab4.5_0000249g0360 Nicotiana tabacum HOM05D009916 ORTHO05D000022 1.2e-17 93.2 86 43.0
PGSC0003DMG400037922 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.6e-17 92.8 83 43.4
CAN.G1249.3 Capsicum annuum HOM05D009916 ORTHO05D014164 6.0e-17 90.9 79 48.1
Nitab4.5_0001653g0020 Nicotiana tabacum HOM05D009916 ORTHO05D014164 2.3e-16 89.0 75 44.0
Nitab4.5_0000551g0200 Nicotiana tabacum HOM05D009916 ORTHO05D014164 8.6e-16 87.0 84 39.3
Peaxi162Scf00065g00077 Petunia axillaris HOM05D009916 ORTHO05D014164 3.3e-15 85.1 80 37.5
PGSC0003DMG400037811 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.3e-15 85.1 74 40.5
Nitab4.5_0003532g0060 Nicotiana tabacum HOM05D009916 ORTHO05D014164 1.2e-14 83.2 69 46.4
Cc00_g20180 Coffea canephora HOM05D000155 ORTHO05D000022 3.1e-13 78.6 75 36.0
PGSC0003DMG400008628 Solanum tuberosum HOM05D000155 ORTHO05D000022 5.2e-13 77.8 78 42.3
Sopen05g017800 Solanum pennellii HOM05D000155 ORTHO05D000022 6.8e-13 77.4 78 35.9
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 6.8e-13 77.4 78 39.7
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 6.8e-13 77.4 75 40.0
Sopen11g007910 Solanum pennellii HOM05D017709 ORTHO05D026164 1.2e-12 76.6 75 37.3
PGSC0003DMG400040069 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.2e-12 76.6 75 40.0
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 3.4e-12 75.1 83 36.1
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 3.4e-12 75.1 83 36.1
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.4e-12 75.1 78 34.6
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 4.4e-12 74.7 78 37.2
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 5.8e-12 74.3 78 38.5
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 5.8e-12 74.3 78 37.2
Nitab4.5_0006852g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.5e-12 73.9 82 34.1
Cc00_g15230 Coffea canephora HOM05D000155 ORTHO05D000022 1.3e-11 73.2 81 28.4
Cc00_g21050 Coffea canephora HOM05D000155 ORTHO05D000022 1.3e-11 73.2 81 28.4
Cc00_g24940 Coffea canephora HOM05D000155 ORTHO05D000022 1.3e-11 73.2 81 28.4
Cc06_g22510 Coffea canephora HOM05D000155 ORTHO05D000022 1.3e-11 73.2 81 28.4
Nitab4.5_0000023g0150 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-11 73.2 78 34.6
Nitab4.5_0000455g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-11 73.2 61 41.0
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 1.3e-11 73.2 78 34.6
Sopen12g016250 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-11 72.8 74 40.5
Nitab4.5_0004719g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.2e-11 72.4 60 46.7
Sopen05g017830 Solanum pennellii HOM05D000004 ORTHO05D000022 2.2e-11 72.4 78 35.9
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 2.2e-11 72.4 75 38.7
Sopen03g011360 Solanum pennellii HOM05D000155 ORTHO05D000022 2.9e-11 72.0 75 36.0
PGSC0003DMG400039694 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.9e-11 72.0 79 36.7
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 2.9e-11 72.0 75 37.3
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-11 71.2 70 40.0
Peaxi162Scf00108g00112 Petunia axillaris HOM05D000155 ORTHO05D000022 6.4e-11 70.9 63 34.9
Nitab4.5_0000315g0080 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.3e-11 70.5 62 38.7
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 8.3e-11 70.5 74 33.8
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-10 69.7 88 33.0
Sopen04g014310 Solanum pennellii HOM05D000155 ORTHO05D000022 1.9e-10 69.3 75 36.0
Cc03_g15170 Coffea canephora HOM05D000025 ORTHO05D000022 2.4e-10 68.9 84 29.8
Sopen08g015470 Solanum pennellii HOM05D000155 ORTHO05D000022 2.4e-10 68.9 79 32.9
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 2.4e-10 68.9 75 34.7
Peaxi162Scf00537g00047 Petunia axillaris HOM05D000155 ORTHO05D000022 4.1e-10 68.2 59 42.4
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 5.4e-10 67.8 92 30.4
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 5.4e-10 67.8 75 34.7
MBI09_g41706_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.1e-10 67.4 92 35.9
Nitab4.5_0000654g0140 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.2e-10 67.0 66 39.4
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 1.2e-09 66.6 78 32.1
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-09 66.6 78 32.1
MBI11_g20531_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-09 66.2 83 31.3
Nitab4.5_0001440g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-09 65.9 48 52.1
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-09 65.9 71 36.6
Lj7P241T13 Lonicera japonica HOM05D000155 ORTHO05D000022 2.7e-09 65.5 89 31.5
Sopen10g010450 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-09 65.1 79 31.6
Sopen11g008050 Solanum pennellii HOM05D000155 ORTHO05D000022 6.0e-09 64.3 96 30.2
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 7.8e-09 63.9 78 33.3
Lj2P663T6 Lonicera japonica HOM05D000155 ORTHO05D000022 1.0e-08 63.5 75 34.7
MBI14_g15792_MAGBIO Magnolia biondii HOM05D000991 ORTHO05D000848 1.0e-08 63.5 92 30.4
Nitab4.5_0000879g0080 Nicotiana tabacum HOM05D009916 ORTHO05D014164 1.0e-08 63.5 51 47.1
Nitab4.5_0001442g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.0e-08 63.5 64 42.2
MBI09_g24463_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.3e-08 63.2 78 33.3
Nitab4.5_0010557g0030 Nicotiana tabacum HOM05D009916 ORTHO05D000022 1.3e-08 63.2 52 44.2
CiPaw.15G160400 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.7e-08 62.8 79 34.2
Sopen10g022660 Solanum pennellii HOM05D000155 ORTHO05D000022 1.7e-08 62.8 62 38.7
Nitab4.5_0006480g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.0e-08 62.0 76 35.5
Lj6P673T55 Lonicera japonica HOM05D000155 ORTHO05D000022 3.9e-08 61.6 79 34.2
MBI05_g39190_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.9e-08 61.6 80 30.0
MBI19_g02315_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.1e-08 61.2 85 36.5
Nitab4.5_0005029g0020 Nicotiana tabacum HOM05D011511 ORTHO05D000022 5.1e-08 61.2 75 32.0
Sopen06g012050 Solanum pennellii HOM05D000155 ORTHO05D000022 5.1e-08 61.2 70 37.1
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 6.6e-08 60.8 66 31.8
MBI02_g21188_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.6e-08 60.5 80 33.8
MBI16_g36546_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.6e-08 60.5 76 35.5
Peaxi162Scf00072g00412 Petunia axillaris HOM05D001426 ORTHO05D001389 8.6e-08 60.5 69 33.3
MBI11_g41203_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.1e-07 60.1 79 32.9
Nitab4.5_0008330g0010 Nicotiana tabacum HOM05D009916 ORTHO05D014164 1.5e-07 59.7 64 37.5
MBI10_g04436_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.9e-07 59.3 89 30.3
MBI16_g05929_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.5e-07 58.9 88 33.0
PGSC0003DMG400010457 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.5e-07 58.9 65 38.5
Nitab4.5_0010879g0030 Nicotiana tabacum HOM05D009916 ORTHO05D000022 3.3e-07 58.5 42 47.6
Peaxi162Scf00229g00123 Petunia axillaris HOM05D000155 ORTHO05D000022 3.3e-07 58.5 41 48.8
PGSC0003DMG400045175 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.3e-07 58.5 59 35.6
Lj9P617T39 Lonicera japonica HOM05D000155 ORTHO05D000022 4.3e-07 58.2 75 32.0
CiPaw.04G130600 Carya illinoinensis HOM05D000155 ORTHO05D000022 5.6e-07 57.8 77 29.9
Sopen01g005290 Solanum pennellii HOM05D000155 ORTHO05D000022 5.6e-07 57.8 75 30.7
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 5.6e-07 57.8 71 33.8
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 5.6e-07 57.8 78 30.8
Aqoxy5G02155 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 7.3e-07 57.4 86 29.1
Aqoxy5G03038 Aquilegia oxysepala HOM05D000003 ORTHO05D000022 7.3e-07 57.4 86 29.1
CiPaw.04G137600 Carya illinoinensis HOM05D000155 ORTHO05D000022 7.3e-07 57.4 76 31.6
MBI04_g42243_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 7.3e-07 57.4 77 35.1
MBI18_g09840_MAGBIO Magnolia biondii HOM05D002057 ORTHO05D000022 7.3e-07 57.4 94 30.9
Nitab4.5_0000512g0090 Nicotiana tabacum HOM05D011511 ORTHO05D000022 7.3e-07 57.4 67 34.3
Nitab4.5_0005232g0010 Nicotiana tabacum HOM05D009916 ORTHO05D014164 7.3e-07 57.4 44 50.0
Nitab4.5_0008817g0010 Nicotiana tabacum HOM05D012063 ORTHO05D016351 7.3e-07 57.4 52 34.6
Sopen10g011030 Solanum pennellii HOM05D000004 ORTHO05D026164 7.3e-07 57.4 66 31.8
MBI15_g23972_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.5e-07 57.0 82 32.9
MBI18_g06638_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.5e-07 57.0 77 33.8
Nitab4.5_0007443g0010 Nicotiana tabacum HOM05D009916 ORTHO05D014164 9.5e-07 57.0 56 41.1
CiPaw.03G246300 Carya illinoinensis HOM05D000003 ORTHO05D000022 1.2e-06 56.6 74 32.4
Cc00_g03270 Coffea canephora HOM05D000155 ORTHO05D000022 1.2e-06 56.6 75 28.0
Cc00_g05820 Coffea canephora HOM05D000155 ORTHO05D000022 1.2e-06 56.6 75 28.0
Lj7P711T40 Lonicera japonica HOM05D000155 ORTHO05D000022 1.2e-06 56.6 77 27.3
MBI01_g15501_MAGBIO Magnolia biondii HOM05D000103 ORTHO05D000049 1.2e-06 56.6 80 31.2
Nitab4.5_0000209g0060 Nicotiana tabacum HOM05D012063 ORTHO05D016351 1.2e-06 56.6 50 38.0
MBI13_g30119_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.1e-06 55.8 84 31.0
MBI06_g39080_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.8e-06 55.5 90 30.0
MBI16_g07272_MAGBIO Magnolia biondii HOM05D000042 ORTHO05D000022 2.8e-06 55.5 81 28.4
MBI17_g42997_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.8e-06 55.5 89 31.5
Nitab4.5_0000732g0150 Nicotiana tabacum HOM05D009916 ORTHO05D000022 2.8e-06 55.5 35 57.1
Nitab4.5_0000543g0240 Nicotiana tabacum HOM05D012063 ORTHO05D016351 3.6e-06 55.1 47 40.4
Nitab4.5_0002619g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.6e-06 55.1 69 34.8
Nitab4.5_0004235g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.6e-06 55.1 52 38.5
Peaxi162Scf00335g01210 Petunia axillaris HOM05D001426 ORTHO05D001389 3.6e-06 55.1 69 29.0
Sopen08g015490 Solanum pennellii HOM05D000003 ORTHO05D000022 3.6e-06 55.1 65 30.8
MBI04_g22190_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.7e-06 54.7 89 23.6
Nitab4.5_0001242g0130 Nicotiana tabacum HOM05D043118 ORTHO05D014164 4.7e-06 54.7 41 43.9
Nitab4.5_0004358g0040 Nicotiana tabacum HOM05D001454 ORTHO05D000007 4.7e-06 54.7 79 30.4
SHI38559 Sapria himalayana HOM05D000024 ORTHO05D000022 4.7e-06 54.7 91 28.6
MBI09_g13298_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 6.2e-06 54.3 85 29.4
MBI13_g21845_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 6.2e-06 54.3 82 32.9
MBI16_g15521_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.2e-06 54.3 82 34.1
SHI33435 Sapria himalayana HOM05D000024 ORTHO05D000022 6.2e-06 54.3 91 28.6
Sopen08g020500 Solanum pennellii HOM05D000155 ORTHO05D000022 6.2e-06 54.3 60 35.0
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 6.2e-06 54.3 59 32.2
MBI04_g44511_MAGBIO Magnolia biondii HOM05D000992 ORTHO05D001928 8.1e-06 53.9 77 31.2
Peaxi162Scf00091g01817 Petunia axillaris HOM05D000155 ORTHO05D000022 8.1e-06 53.9 48 39.6


User provided reference genes

Program Settings