Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009204g0020 Nicotiana tabacum HOM05D001473 ORTHO05D003934 3.0e-67 258.5 137 100.0
Nitab4.5_0000409g0100 Nicotiana tabacum HOM05D001473 ORTHO05D003934 1.0e-27 127.1 98 77.6
Cc02_g08900 Coffea canephora HOM05D001473 ORTHO05D003934 4.2e-21 105.1 141 57.4
ECA233G2045 Erigeron canadensis HOM05D001473 ORTHO05D003934 9.4e-21 104.0 127 57.5
CAN.G1609.5 Capsicum annuum HOM05D001473 ORTHO05D003934 1.2e-20 103.6 127 61.4
HanXRQChr08g0225461 Helianthus annuus HOM05D001473 ORTHO05D003934 1.2e-20 103.6 127 57.5
Solyc04g009950.3 Solanum lycopersicum HOM05D001473 ORTHO05D003934 1.2e-20 103.6 127 61.4
Sopen04g005080 Solanum pennellii HOM05D001473 ORTHO05D003934 1.2e-20 103.6 127 61.4
PGSC0003DMG400011500 Solanum tuberosum HOM05D001473 ORTHO05D003934 1.2e-20 103.6 127 60.6
AUR62000484 Chenopodium quinoa HOM05D001473 ORTHO05D003934 6.1e-20 101.3 118 64.4
DCAR_023095 Daucus carota HOM05D001473 ORTHO05D003934 6.1e-20 101.3 127 55.9
Lsat_1_v5_gn_8_2880 Lactuca sativa HOM05D001473 ORTHO05D003934 6.1e-20 101.3 127 56.7
Peaxi162Scf00135g00313 Petunia axillaris HOM05D001473 ORTHO05D003934 1.0e-19 100.5 127 59.8
EL10Ac4g09571 Beta vulgaris HOM05D001473 ORTHO05D003934 1.4e-19 100.1 118 63.6
AUR62006826 Chenopodium quinoa HOM05D001473 ORTHO05D003934 1.4e-19 100.1 118 63.6
SGA_v2.0_scaffold1G00525 Striga asiatica HOM05D001473 ORTHO05D003934 2.3e-19 99.4 127 57.5
AUR62023607 Chenopodium quinoa HOM05D001473 ORTHO05D003934 3.0e-19 99.0 117 63.2
Dinv05754 Davidia involucrata HOM05D001473 ORTHO05D003934 3.0e-19 99.0 127 57.5
Oeu012234.1 Olea europaea HOM05D001473 ORTHO05D003934 3.0e-19 99.0 127 56.7
Migut.B01119 Erythranthe guttata HOM05D001473 ORTHO05D003934 5.2e-19 98.2 130 56.9
Migut.F01544 Erythranthe guttata HOM05D001473 ORTHO05D003934 5.2e-19 98.2 127 56.7
Hund07267 Selenicereus undatus HOM05D001473 ORTHO05D003934 5.2e-19 98.2 118 62.7
unitig_0.g2788 Utricularia gibba HOM05D001473 ORTHO05D003934 6.8e-19 97.8 127 56.7
unitig_747.g21794 Utricularia gibba HOM05D001473 ORTHO05D003934 6.8e-19 97.8 127 56.7
Actinidia40002 Actinidia chinensis HOM05D001473 ORTHO05D003934 8.8e-19 97.4 127 58.3
Lj5A229T67 Lonicera japonica HOM05D001473 ORTHO05D003934 1.2e-18 97.1 127 58.3
CSS0044349 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 1.5e-18 96.7 127 57.5
Aqoxy2G03659 Aquilegia oxysepala HOM05D001473 ORTHO05D003934 3.4e-18 95.5 127 57.5
Dinv18449 Davidia involucrata HOM05D001473 ORTHO05D003934 3.4e-18 95.5 130 56.2
CANSAT54G0715 Cannabis sativa HOM05D001473 ORTHO05D003934 4.4e-18 95.1 118 61.0
ATR0736G172 Amborella trichopoda HOM05D001473 ORTHO05D003934 5.7e-18 94.7 118 61.9
Glyma.10G165900 Glycine max HOM05D001473 ORTHO05D003934 7.5e-18 94.4 118 60.2
Glyma.20G223300 Glycine max HOM05D001473 ORTHO05D003934 7.5e-18 94.4 118 60.2
Manes.08G139000 Manihot esculenta HOM05D001473 ORTHO05D003934 7.5e-18 94.4 118 61.0
Rhsim05G0175000 Rhododendron simsii HOM05D001473 ORTHO05D003934 7.5e-18 94.4 127 56.7
Sc08g0009190 Simmondsia chinensis HOM05D001473 ORTHO05D003934 7.5e-18 94.4 141 53.2
vmacro19999 Vaccinium macrocarpon HOM05D001473 ORTHO05D003934 7.5e-18 94.4 127 56.7
ClCG06G009620 Citrullus lanatus HOM05D001473 ORTHO05D003934 9.7e-18 94.0 118 61.0
Duzib177G0283 Durio zibethinus HOM05D001473 ORTHO05D003934 9.7e-18 94.0 118 61.0
Phvul.004G090900 Phaseolus vulgaris HOM05D001473 ORTHO05D003934 9.7e-18 94.0 118 60.2
SalBow1G0011 Salvia bowleyana HOM05D001473 ORTHO05D003934 9.7e-18 94.0 127 52.8
CSS0041231 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 1.3e-17 93.6 127 55.9
MELO3C017522.2 Cucumis melo HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 60.2
CsaV3_1G045350 Cucumis sativus L. HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 60.2
CsaV3_UNG002030 Cucumis sativus L. HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 60.2
FvH4_6g01950 Fragaria vesca HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 61.0
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 61.0
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 61.0
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 61.0
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 61.0
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 61.0
FAN14G3813 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 61.0
Gohir.A13G167900 Gossypium hirsutum HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 61.0
Gohir.D11G258300 Gossypium hirsutum HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 61.0
Gohir.D13G173300 Gossypium hirsutum HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 61.0
Gorai.007G276500 Gossypium raimondii HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 61.0
Gorai.013G187200 Gossypium raimondii HOM05D001473 ORTHO05D003934 1.3e-17 93.6 127 56.7
VMungo0464G0145 Vigna mungo HOM05D001473 ORTHO05D003934 1.3e-17 93.6 118 60.2
Ca_09455_v3 Cicer arietinum L. HOM05D001473 ORTHO05D003934 1.7e-17 93.2 127 55.9
Potri.013G046300 Populus trichocarpa HOM05D001473 ORTHO05D003934 1.7e-17 93.2 127 52.0
Lsat_1_v5_gn_8_72320 Lactuca sativa HOM05D001473 ORTHO05D003934 2.2e-17 92.8 128 53.1
Lj1g0012496 Lotus japonicus HOM05D001473 ORTHO05D003934 2.8e-17 92.4 118 59.3
Thecc.05G271600 Theobroma cacao HOM05D001473 ORTHO05D003934 2.8e-17 92.4 118 60.2
TAR362G0879 Trochodendron aralioides HOM05D001473 ORTHO05D003934 2.8e-17 92.4 127 52.8
Atru.chr2.968 Acer truncatum HOM05D001473 ORTHO05D003934 3.7e-17 92.0 127 55.1
Cfa002922 Carpinus fangiana HOM05D001473 ORTHO05D003934 3.7e-17 92.0 127 55.1
Haze_25281 Corylus avellana HOM05D001473 ORTHO05D003934 3.7e-17 92.0 127 55.1
Duzib106G1036 Durio zibethinus HOM05D001473 ORTHO05D003934 3.7e-17 92.0 118 57.6
Manes.09G148400 Manihot esculenta HOM05D001473 ORTHO05D003934 3.7e-17 92.0 118 59.3
Prupe.6G349400 Prunus persica HOM05D001473 ORTHO05D003934 3.7e-17 92.0 118 59.3
CSS0046947 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 4.8e-17 91.7 118 59.3
Eucgr.B01570 Eucalyptus grandis HOM05D001473 ORTHO05D003934 4.8e-17 91.7 127 52.0
MD04G1229500 Malus domestica HOM05D001473 ORTHO05D003934 4.8e-17 91.7 118 59.3
MD12G1246400 Malus domestica HOM05D001473 ORTHO05D003934 4.8e-17 91.7 118 59.3
PGR031G3359 Punica granatum HOM05D001473 ORTHO05D003934 4.8e-17 91.7 118 58.5
COL.COLO4_15470 Corchorus olitorius HOM05D001473 ORTHO05D003934 6.3e-17 91.3 118 59.3
CsaV3_7G031760 Cucumis sativus L. HOM05D004228 ORTHO05D003934 6.3e-17 91.3 118 59.3
DCAR_029377 Daucus carota HOM05D001473 ORTHO05D003934 6.3e-17 91.3 124 53.2
Duzib128G0032 Durio zibethinus HOM05D001473 ORTHO05D003934 6.3e-17 91.3 118 60.2
PSO017G2945 Papaver somniferum HOM05D001473 ORTHO05D003934 6.3e-17 91.3 127 54.3
PSO063G2917 Papaver somniferum HOM05D001473 ORTHO05D003934 6.3e-17 91.3 127 54.3
Peaxi162Scf00304g00074 Petunia axillaris HOM05D001473 ORTHO05D003934 6.3e-17 91.3 119 58.0
RcHm_v2.0_Chr3g0449801 Rosa chinensis HOM05D001473 ORTHO05D003934 6.3e-17 91.3 118 59.3
TWI31G0266 Tripterygium wilfordii HOM05D001473 ORTHO05D003934 6.3e-17 91.3 127 52.0
HPP92_023254 Vanilla planifolia HOM05D001473 ORTHO05D003934 6.3e-17 91.3 141 52.5
HPP92_023313 Vanilla planifolia HOM05D001473 ORTHO05D003934 6.3e-17 91.3 141 52.5
arahy.Tifrunner.gnm1.ann1.33TMW6 Arachis hypogaea HOM05D001473 ORTHO05D003934 8.3e-17 90.9 118 58.5
Cpa.g.sc306.1 Carica papaya HOM05D001473 ORTHO05D003934 8.3e-17 90.9 127 55.1
CiPaw.04G081100 Carya illinoinensis HOM05D001473 ORTHO05D003934 8.3e-17 90.9 118 58.5
Ciclev10018691m.g Citrus clementina HOM05D001473 ORTHO05D003934 8.3e-17 90.9 121 58.7
Potri.019G018400 Populus trichocarpa HOM05D001473 ORTHO05D003934 8.3e-17 90.9 127 51.2
THA.LOC104823763 Tarenaya hassleriana HOM05D001473 ORTHO05D003934 8.3e-17 90.9 127 55.9
CSS0020922 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 1.1e-16 90.5 127 54.3
Os04g0348300 Oryza sativa ssp. japonica HOM05D001473 ORTHO05D003934 1.1e-16 90.5 144 52.1
SEGI_20641 Sequoiadendron giganteum HOM05D001473 ORTHO05D003934 1.1e-16 90.5 127 55.1
TPR.G6939 Trifolium pratense HOM05D001473 ORTHO05D003934 1.1e-16 90.5 127 54.3
Carub.0001s0911 Capsella rubella HOM05D001473 ORTHO05D003934 1.4e-16 90.1 127 52.8
CARHR009740 Cardamine hirsuta HOM05D001473 ORTHO05D003934 1.4e-16 90.1 127 52.8
Thhalv10006800m.g Eutrema salsugineum HOM05D001473 ORTHO05D003934 1.4e-16 90.1 127 52.8
Phvul.L001860 Phaseolus vulgaris HOM05D001473 ORTHO05D003934 1.4e-16 90.1 118 56.8
Psat3g006920 Pisum sativum HOM05D001473 ORTHO05D003934 1.4e-16 90.1 127 54.3
Sabra19G0028000 Salix brachista HOM05D001473 ORTHO05D003934 1.4e-16 90.1 127 50.4
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 1.4e-16 90.1 127 50.4
Sp1g08360 Schrenkiella parvula HOM05D001473 ORTHO05D003934 1.4e-16 90.1 127 52.8
Aa31LG1G5220 Aethionema arabicum HOM05D001473 ORTHO05D003934 1.8e-16 89.7 127 52.8
AL1G20320 Arabidopsis lyrata HOM05D001473 ORTHO05D003934 1.8e-16 89.7 127 52.8
AT1G09770 Arabidopsis thaliana HOM05D001473 ORTHO05D003934 1.8e-16 89.7 127 52.8
CDE04G2649 Ceratophyllum demersum HOM05D001473 ORTHO05D003934 1.8e-16 89.7 118 54.2
Lalb_Chr18g0044021 Lupinus albus HOM05D001473 ORTHO05D003934 1.8e-16 89.7 118 57.6
Medtr7g115550 Medicago truncatula HOM05D001473 ORTHO05D003934 1.8e-16 89.7 127 53.5
SEGI_38835 Sequoiadendron giganteum HOM05D001473 ORTHO05D003934 1.8e-16 89.7 127 55.9
TWI79G0745 Tripterygium wilfordii HOM05D001473 ORTHO05D003934 1.8e-16 89.7 118 55.1
Medtr5g010470 Medicago truncatula HOM05D001473 ORTHO05D003934 2.4e-16 89.4 127 53.5
CDE07G0773 Ceratophyllum demersum HOM05D001473 ORTHO05D003934 3.1e-16 89.0 118 55.1
RcHm_v2.0_Chr5g0032281 Rosa chinensis HOM05D001473 ORTHO05D003934 3.1e-16 89.0 120 53.3
Sed0003092 Sechium edule HOM05D001473 ORTHO05D003934 3.1e-16 89.0 121 53.7
Lj5g0018401 Lotus japonicus HOM05D001473 ORTHO05D003934 4.1e-16 88.6 118 55.1
arahy.Tifrunner.gnm1.ann1.8L6PVU Arachis hypogaea HOM05D001473 ORTHO05D003934 5.3e-16 88.2 118 57.6
arahy.Tifrunner.gnm1.ann1.HJHY8E Arachis hypogaea HOM05D001473 ORTHO05D003934 5.3e-16 88.2 118 54.2
arahy.Tifrunner.gnm1.ann1.R6YD0H Arachis hypogaea HOM05D001473 ORTHO05D003934 5.3e-16 88.2 118 54.2
Lalb_Chr15g0076051 Lupinus albus HOM05D001473 ORTHO05D003934 5.3e-16 88.2 118 55.9
Mapoly0014s0195 Marchantia polymorpha HOM05D001473 ORTHO05D003934 5.3e-16 88.2 127 52.8
SHI00615 Sapria himalayana HOM05D001473 ORTHO05D003934 5.3e-16 88.2 127 54.3
THA.LOC104805779 Tarenaya hassleriana HOM05D001473 ORTHO05D003934 5.3e-16 88.2 130 53.8
A06p06440 Brassica napus HOM05D001473 ORTHO05D003934 7.0e-16 87.8 127 51.2
C05p07840 Brassica napus HOM05D001473 ORTHO05D003934 7.0e-16 87.8 127 51.2
BolC5t29535H Brassica oleracea HOM05D001473 ORTHO05D003934 7.0e-16 87.8 127 51.2
BraA06t23855Z Brassica rapa HOM05D001473 ORTHO05D003934 7.0e-16 87.8 127 51.2
C08p13180 Brassica napus HOM05D001473 ORTHO05D003934 9.1e-16 87.4 127 51.2
BolC8t48947H Brassica oleracea HOM05D001473 ORTHO05D003934 9.1e-16 87.4 127 51.2
Zm00001eb142770 Zea mays HOM05D001473 ORTHO05D003934 9.1e-16 87.4 144 50.7
QL03p030821 Quercus lobata HOM05D001473 ORTHO05D003934 1.2e-15 87.0 121 52.9
Sc03g0006090 Simmondsia chinensis HOM05D001473 ORTHO05D003934 1.2e-15 87.0 128 52.3
AagrBONN_evm.TU.Sc2ySwM_368.3249 Anthoceros agrestis HOM05D001473 ORTHO05D003934 1.6e-15 86.7 127 52.8
Pp3c3_17580 Physcomitrium patens HOM05D001473 ORTHO05D003934 1.6e-15 86.7 118 55.1
BraA08t35347Z Brassica rapa HOM05D001473 ORTHO05D003934 2.7e-15 85.9 128 53.9
A08p34350 Brassica napus HOM05D001473 ORTHO05D003934 3.5e-15 85.5 128 53.9
Thhalv10001097m.g Eutrema salsugineum HOM05D001473 ORTHO05D003934 3.5e-15 85.5 127 49.6
SMO196G0202 Selaginella moellendorffii HOM05D001473 ORTHO05D003934 4.5e-15 85.1 127 54.3
SMO234G0053 Selaginella moellendorffii HOM05D001473 ORTHO05D003934 4.5e-15 85.1 127 54.3
CBR_g39826 Chara braunii HOM05D001473 ORTHO05D003934 1.7e-14 83.2 128 53.1
SMO196G0272 Selaginella moellendorffii HOM05D001473 ORTHO05D003934 1.9e-13 79.7 127 52.8
GSVIVG01023527001 Vitis vinifera HOM05D001473 ORTHO05D003934 9.4e-13 77.4 121 51.2
Cre03.g197350 Chlamydomonas reinhardtii HOM05D001473 ORTHO05D003934 1.0e-11 73.9 126 43.7
MCO01G097 Micromonas commoda HOM05D001473 ORTHO05D003934 5.2e-11 71.6 126 45.2
PRCOL_00004307 Prasinoderma coloniale HOM05D001473 ORTHO05D003934 5.2e-11 71.6 117 47.9
Lsat_1_v5_gn_5_135881 Lactuca sativa HOM05D001473 ORTHO05D003934 2.0e-10 69.7 111 49.5
BcaC04g22223 Brassica carinata HOM05D001473 ORTHO05D003934 5.7e-10 68.2 86 55.8
C09p21880 Brassica napus HOM05D001473 ORTHO05D003934 5.7e-10 68.2 86 55.8
BolC9t55093H Brassica oleracea HOM05D001473 ORTHO05D003934 5.7e-10 68.2 86 55.8
BolC1t01331H Brassica oleracea HOM05D001473 ORTHO05D003934 9.8e-10 67.4 86 57.0
Gohir.A11G247950 Gossypium hirsutum HOM05D001473 ORTHO05D003934 9.8e-10 67.4 142 47.2
A09p17580 Brassica napus HOM05D001473 ORTHO05D003934 2.8e-09 65.9 86 55.8
BraA09t37388Z Brassica rapa HOM05D001473 ORTHO05D003934 2.8e-09 65.9 86 55.8
Haze_26225 Corylus avellana HOM05D001473 ORTHO05D003934 6.3e-09 64.7 122 43.4
BcaB07g31211 Brassica carinata HOM05D001473 ORTHO05D003934 4.5e-07 58.5 86 50.0
Cfa025479 Carpinus fangiana HOM05D001473 ORTHO05D003934 8.6e-06 54.3 64 56.2


User provided reference genes

Program Settings