Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008349g0010 Nicotiana tabacum HOM05D003445 ORTHO05D004114 9.9e-32 139.4 67 100.0
Nitab4.5_0000096g0210 Nicotiana tabacum HOM05D003445 ORTHO05D004114 1.9e-14 82.0 52 76.9
Solyc05g055450.3 Solanum lycopersicum HOM05D003445 ORTHO05D004114 3.2e-14 81.3 57 68.4
Sopen05g033900 Solanum pennellii HOM05D003445 ORTHO05D004114 3.2e-14 81.3 57 68.4
Nitab4.5_0002692g0090 Nicotiana tabacum HOM05D003445 ORTHO05D004114 5.5e-14 80.5 52 75.0
Peaxi162Scf00253g00318 Petunia axillaris HOM05D003445 ORTHO05D004114 1.2e-13 79.3 51 72.5
Peaxi162Scf00409g00218 Petunia axillaris HOM05D003445 ORTHO05D004114 4.6e-13 77.4 52 73.1
PGSC0003DMG400023482 Solanum tuberosum HOM05D003445 ORTHO05D004114 7.9e-13 76.6 58 67.2
CAN.G135.24 Capsicum annuum HOM05D003445 ORTHO05D004114 1.0e-12 76.3 52 73.1
Nitab4.5_0010505g0010 Nicotiana tabacum HOM05D003445 ORTHO05D004114 3.0e-12 74.7 52 71.2
PGSC0003DMG400027335 Solanum tuberosum HOM05D003445 ORTHO05D004114 6.7e-12 73.6 52 71.2
Sopen11g003810 Solanum pennellii HOM05D003445 ORTHO05D004114 1.5e-11 72.4 52 69.2
CAN.G1891.4 Capsicum annuum HOM05D003445 ORTHO05D004114 7.4e-11 70.1 52 63.5
Nitab4.5_0009159g0020 Nicotiana tabacum HOM05D003445 ORTHO05D004114 7.4e-11 70.1 44 77.3
Solyc11g007940.2 Solanum lycopersicum HOM05D003445 ORTHO05D004114 7.4e-11 70.1 52 67.3
SalBow4G0167 Salvia bowleyana HOM05D003445 ORTHO05D004114 1.6e-10 68.9 53 64.2
Actinidia38891 Actinidia chinensis HOM05D003445 ORTHO05D004114 2.1e-10 68.6 44 75.0
Cc02_g10580 Coffea canephora HOM05D003445 ORTHO05D004114 2.8e-10 68.2 53 67.9
Actinidia34789 Actinidia chinensis HOM05D003445 ORTHO05D004114 3.7e-10 67.8 53 66.0
CSS0030750 Camellia sinensis var. sinensis HOM05D003445 ORTHO05D004114 6.2e-10 67.0 52 65.4
MSTRG.8120 Avicennia marina HOM05D003445 ORTHO05D004114 1.4e-09 65.9 53 64.2
Migut.F01911 Erythranthe guttata HOM05D003445 ORTHO05D004114 1.4e-09 65.9 53 62.3
CANSAT56G2777 Cannabis sativa HOM05D003445 ORTHO05D004114 1.8e-09 65.5 52 65.4
Oeu060277.5 Olea europaea HOM05D003445 ORTHO05D004114 1.8e-09 65.5 53 64.2
SalBow6G4419 Salvia bowleyana HOM05D003445 ORTHO05D004114 2.4e-09 65.1 53 64.2
CSS0001382 Camellia sinensis var. sinensis HOM05D003445 ORTHO05D004114 4.0e-09 64.3 44 68.2
Rhsim09G0145400 Rhododendron simsii HOM05D003445 ORTHO05D004114 4.0e-09 64.3 44 68.2
DCAR_019061 Daucus carota HOM05D003445 ORTHO05D004114 5.3e-09 63.9 51 58.8
PGR142G3968 Punica granatum HOM05D003445 ORTHO05D004114 5.3e-09 63.9 44 70.5
QL08p053096 Quercus lobata HOM05D003445 ORTHO05D004114 5.3e-09 63.9 56 62.5
TWI38G0253 Tripterygium wilfordii HOM05D003445 ORTHO05D004114 5.3e-09 63.9 53 62.3
Gohir.A10G200400 Gossypium hirsutum HOM05D003445 ORTHO05D004114 6.9e-09 63.5 45 66.7
PSO339G2738 Papaver somniferum HOM05D003445 ORTHO05D004114 6.9e-09 63.5 51 62.7
unitig_736.g22325 Utricularia gibba HOM05D003445 ORTHO05D004114 1.2e-08 62.8 53 60.4
unitig_899.g15058 Utricularia gibba HOM05D003445 ORTHO05D004114 1.2e-08 62.8 53 60.4
vmacro10262 Vaccinium macrocarpon HOM05D003445 ORTHO05D004114 1.2e-08 62.8 44 65.9
MD07G1074100 Malus domestica HOM05D003445 ORTHO05D004114 1.5e-08 62.4 52 57.7
MSTRG.27501 Avicennia marina HOM05D003445 ORTHO05D004114 2.0e-08 62.0 53 60.4
Cfa001777 Carpinus fangiana HOM05D003445 ORTHO05D004114 2.0e-08 62.0 52 61.5
Prupe.2G093900 Prunus persica HOM05D003445 ORTHO05D004114 2.0e-08 62.0 52 59.6
Thecc.10G089500 Theobroma cacao HOM05D003445 ORTHO05D004114 2.0e-08 62.0 52 57.7
Gohir.D10G208300 Gossypium hirsutum HOM05D003445 ORTHO05D004114 3.4e-08 61.2 44 65.9
Gorai.011G234000 Gossypium raimondii HOM05D003445 ORTHO05D004114 3.4e-08 61.2 44 65.9
Oeu060276.1 Olea europaea HOM05D003445 ORTHO05D004114 3.4e-08 61.2 53 62.3
PSO063G2817 Papaver somniferum HOM05D003445 ORTHO05D004114 3.4e-08 61.2 51 60.8
Haze_16775 Corylus avellana HOM05D003445 ORTHO05D004114 5.8e-08 60.5 43 67.4
FAN01G0566 Fragaria x ananassa HOM05D003445 ORTHO05D004114 5.8e-08 60.5 52 57.7
FAN03G1234 Fragaria x ananassa HOM05D003445 ORTHO05D004114 5.8e-08 60.5 52 57.7
FAN06G2771 Fragaria x ananassa HOM05D003445 ORTHO05D004114 5.8e-08 60.5 52 57.7
Gorai.009G308500 Gossypium raimondii HOM05D003445 ORTHO05D004114 5.8e-08 60.5 52 57.7
Manes.11G087166 Manihot esculenta HOM05D003445 ORTHO05D004114 5.8e-08 60.5 52 59.6
Sc09g0005840 Simmondsia chinensis HOM05D003445 ORTHO05D004114 5.8e-08 60.5 43 60.5
arahy.Tifrunner.gnm1.ann1.2WVS1U Arachis hypogaea HOM05D003445 ORTHO05D004114 7.6e-08 60.1 56 55.4
arahy.Tifrunner.gnm1.ann1.68AZQV Arachis hypogaea HOM05D003445 ORTHO05D004114 7.6e-08 60.1 56 55.4
Eucgr.G02737 Eucalyptus grandis HOM05D003445 ORTHO05D004114 7.6e-08 60.1 44 63.6
FvH4_7g06600 Fragaria vesca HOM05D003445 ORTHO05D004114 7.6e-08 60.1 52 57.7
FAN10G3468 Fragaria x ananassa HOM05D003445 ORTHO05D004114 7.6e-08 60.1 52 57.7
Glyma.10G198300 Glycine max HOM05D003445 ORTHO05D004114 7.6e-08 60.1 51 54.9
Lalb_Chr06g0170031 Lupinus albus HOM05D003445 ORTHO05D004114 7.6e-08 60.1 43 65.1
COL.COLO4_02905 Corchorus olitorius HOM05D003445 ORTHO05D004114 1.0e-07 59.7 52 55.8
Gohir.A06G168900 Gossypium hirsutum HOM05D003445 ORTHO05D004114 1.0e-07 59.7 52 57.7
Gohir.D06G176400 Gossypium hirsutum HOM05D003445 ORTHO05D004114 1.0e-07 59.7 52 57.7
Gorai.010G207600 Gossypium raimondii HOM05D003445 ORTHO05D004114 1.0e-07 59.7 52 57.7
MD02G1237900 Malus domestica HOM05D003445 ORTHO05D004114 1.0e-07 59.7 43 62.8
MD02G1241800 Malus domestica HOM05D003445 ORTHO05D004114 1.0e-07 59.7 43 62.8
Psat6g173360 Pisum sativum HOM05D003445 ORTHO05D004114 1.0e-07 59.7 44 59.1
Gohir.D05G292300 Gossypium hirsutum HOM05D003445 ORTHO05D004114 1.3e-07 59.3 52 57.7
CiPaw.01G265300 Carya illinoinensis HOM05D003445 ORTHO05D004114 1.7e-07 58.9 43 65.1
Duzib114G0852 Durio zibethinus HOM05D003445 ORTHO05D004114 1.7e-07 58.9 52 59.6
Hma1.2p1_1009F.1_g247280 Hydrangea macrophylla HOM05D003445 ORTHO05D004114 1.7e-07 58.9 55 60.0
Lalb_Chr02g0151111 Lupinus albus HOM05D003445 ORTHO05D004114 1.7e-07 58.9 43 65.1
RcHm_v2.0_Chr1g0335271 Rosa chinensis HOM05D003445 ORTHO05D004114 1.7e-07 58.9 52 57.7
GSVIVG01016165001 Vitis vinifera HOM05D003445 ORTHO05D004114 1.7e-07 58.9 52 59.6
Duzib128G1656 Durio zibethinus HOM05D003445 ORTHO05D004114 2.2e-07 58.5 52 55.8
Gohir.A05G291200 Gossypium hirsutum HOM05D003445 ORTHO05D004114 2.2e-07 58.5 52 57.7
Atru.chr12.903 Acer truncatum HOM05D003445 ORTHO05D004114 2.9e-07 58.2 44 61.4
CiPaw.02G170100 Carya illinoinensis HOM05D003445 ORTHO05D004114 2.9e-07 58.2 43 62.8
Dinv36360 Davidia involucrata HOM05D003445 ORTHO05D004114 2.9e-07 58.2 52 61.5
Lj5g0011720 Lotus japonicus HOM05D003445 ORTHO05D004114 2.9e-07 58.2 52 55.8
TWI63G1099 Tripterygium wilfordii HOM05D003445 ORTHO05D004114 2.9e-07 58.2 53 56.6
TAR623G1080 Trochodendron aralioides HOM05D003445 ORTHO05D004114 2.9e-07 58.2 51 58.8
Potri.010G230500 Populus trichocarpa HOM05D003445 ORTHO05D004114 3.8e-07 57.8 52 57.7
TWI15G0156 Tripterygium wilfordii HOM05D003445 ORTHO05D004114 3.8e-07 57.8 53 56.6
TAR633G1158 Trochodendron aralioides HOM05D003445 ORTHO05D004114 3.8e-07 57.8 44 63.6
Ca_10454_v3 Cicer arietinum L. HOM05D003445 ORTHO05D004114 6.5e-07 57.0 44 56.8
THA.LOC104823197 Tarenaya hassleriana HOM05D003445 ORTHO05D004114 6.5e-07 57.0 44 61.4
Aqoxy2G01633 Aquilegia oxysepala HOM05D003445 ORTHO05D004114 8.4e-07 56.6 52 53.8
Dinv31261 Davidia involucrata HOM05D003445 ORTHO05D045149 8.4e-07 56.6 52 59.6
Lalb_Chr19g0129371 Lupinus albus HOM05D003445 ORTHO05D004114 8.4e-07 56.6 43 60.5
Sabra10G0178800 Salix brachista HOM05D003445 ORTHO05D004114 8.4e-07 56.6 53 52.8
Glyma.20G191700 Glycine max HOM05D003445 ORTHO05D004114 1.1e-06 56.2 56 53.6
TPR.G37741 Trifolium pratense HOM05D003445 ORTHO05D004114 1.1e-06 56.2 44 56.8
HPP92_014722 Vanilla planifolia HOM05D003445 ORTHO05D004114 1.1e-06 56.2 43 60.5
Aa31LG11G5300 Aethionema arabicum HOM05D003445 ORTHO05D004114 1.4e-06 55.8 52 51.9
BraA02t04812Z Brassica rapa HOM05D003445 ORTHO05D004114 1.4e-06 55.8 50 52.0
Cpa.g.sc53.166 Carica papaya HOM05D003445 ORTHO05D004114 1.4e-06 55.8 52 55.8
Nn3g19092 Nelumbo nucifera HOM05D003445 ORTHO05D004114 1.4e-06 55.8 44 59.1
Nn6g35202 Nelumbo nucifera HOM05D003445 ORTHO05D004114 1.4e-06 55.8 51 56.9
TAR369G0057 Trochodendron aralioides HOM05D003445 ORTHO05D004114 1.4e-06 55.8 51 56.9
Zm00001eb259230 Zea mays HOM05D003445 ORTHO05D004114 1.4e-06 55.8 44 59.1
Os02g0822300 Oryza sativa ssp. japonica HOM05D003445 ORTHO05D004114 1.9e-06 55.5 44 61.4
THA.LOC104826969 Tarenaya hassleriana HOM05D003445 ORTHO05D004114 1.9e-06 55.5 52 53.8
Zm00001eb191030 Zea mays HOM05D003445 ORTHO05D004114 1.9e-06 55.5 44 56.8
Aqoxy1G01069 Aquilegia oxysepala HOM05D003445 ORTHO05D004114 2.5e-06 55.1 51 52.9
AL6G14070 Arabidopsis lyrata HOM05D003445 ORTHO05D004114 2.5e-06 55.1 52 51.9
AT5G04430 Arabidopsis thaliana HOM05D003445 ORTHO05D004114 2.5e-06 55.1 52 51.9
BcaC06g32151 Brassica carinata HOM05D003445 ORTHO05D004114 2.5e-06 55.1 52 51.9
Carub.0006s0337 Capsella rubella HOM05D003445 ORTHO05D004114 2.5e-06 55.1 52 51.9
DCAR_006384 Daucus carota HOM05D003445 ORTHO05D004114 2.5e-06 55.1 51 52.9
PSO339G4614 Papaver somniferum HOM05D003445 ORTHO05D004114 2.5e-06 55.1 45 66.7
PSO801G0704 Papaver somniferum HOM05D003445 ORTHO05D004114 2.5e-06 55.1 45 66.7
Potri.008G030700 Populus trichocarpa HOM05D003445 ORTHO05D004114 2.5e-06 55.1 62 48.4
Sabra08G0020500 Salix brachista HOM05D003445 ORTHO05D004114 2.5e-06 55.1 62 48.4
VMungo0720G0843 Vigna mungo HOM05D003445 ORTHO05D004114 2.5e-06 55.1 56 53.6
Medtr1g090773 Medicago truncatula HOM05D003445 ORTHO05D004114 3.2e-06 54.7 44 56.8
Phvul.007G141100 Phaseolus vulgaris HOM05D003445 ORTHO05D004114 3.2e-06 54.7 56 53.6
BcaC03g12945 Brassica carinata HOM05D003445 ORTHO05D004114 4.2e-06 54.3 52 51.9
C03p02050 Brassica napus HOM05D003445 ORTHO05D004114 5.5e-06 53.9 51 51.0
BolC3t12758H Brassica oleracea HOM05D003445 ORTHO05D004114 5.5e-06 53.9 51 51.0
A03p01680 Brassica napus HOM05D003445 ORTHO05D004114 7.1e-06 53.5 51 49.0
A10p31650 Brassica napus HOM05D003445 ORTHO05D004114 7.1e-06 53.5 51 51.0
BolC9t59976H Brassica oleracea HOM05D003445 ORTHO05D004114 7.1e-06 53.5 51 51.0
BraA03t09543Z Brassica rapa HOM05D003445 ORTHO05D004114 7.1e-06 53.5 51 49.0
BraA10t45211Z Brassica rapa HOM05D003445 ORTHO05D004114 7.1e-06 53.5 51 51.0
BcaB01g05898 Brassica carinata HOM05D003445 ORTHO05D004114 9.3e-06 53.1 44 54.5
BcaB05g21762 Brassica carinata HOM05D003445 ORTHO05D004114 9.3e-06 53.1 44 54.5
C02p01930 Brassica napus HOM05D003445 ORTHO05D004114 9.3e-06 53.1 44 54.5
C09p72320 Brassica napus HOM05D003445 ORTHO05D004114 9.3e-06 53.1 52 51.9
BolC2t06150H Brassica oleracea HOM05D003445 ORTHO05D004114 9.3e-06 53.1 44 54.5
CARHR208830 Cardamine hirsuta HOM05D003445 ORTHO05D004114 9.3e-06 53.1 44 54.5
Hund22304 Selenicereus undatus HOM05D003445 ORTHO05D004114 9.3e-06 53.1 44 56.8


User provided reference genes

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