Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008212g0010 Nicotiana tabacum HOM05D005962 ORTHO05D007325 8.7e-99 363.6 181 100.0
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 2.2e-25 119.8 204 43.1
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 4.9e-25 118.6 203 42.9
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 8.3e-25 117.9 203 42.9
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 4.1e-24 115.5 202 42.6
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 4.1e-24 115.5 198 43.9
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.2e-23 114.0 198 43.4
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 3.9e-22 109.0 198 42.9
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 6.6e-22 108.2 194 41.8
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 8.6e-22 107.8 198 42.9
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 1.9e-21 106.7 198 41.9
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 7.3e-21 104.8 197 40.1
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 9.5e-21 104.4 195 42.1
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 1.1e-19 100.9 196 39.8
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 1.4e-19 100.5 199 38.7
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 1.4e-19 100.5 199 38.7
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 1.8e-19 100.1 197 40.1
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 1.8e-19 100.1 197 40.1
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 3.1e-19 99.4 201 38.8
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 4.0e-19 99.0 200 40.5
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 5.2e-19 98.6 196 38.8
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 6.8e-19 98.2 202 38.6
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 6.8e-19 98.2 200 37.5
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 8.9e-19 97.8 197 38.6
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 8.9e-19 97.8 203 40.4
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 1.5e-18 97.1 196 39.8
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 2.0e-18 96.7 204 38.7
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 2.0e-18 96.7 200 39.0
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 2.6e-18 96.3 195 38.5
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 3.4e-18 95.9 201 39.8
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 4.4e-18 95.5 201 36.8
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 5.8e-18 95.1 200 38.5
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 1.3e-17 94.0 195 39.5
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 2.2e-17 93.2 199 37.7
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 2.9e-17 92.8 198 38.9
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 2.9e-17 92.8 190 40.5
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 2.9e-17 92.8 200 38.0
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 3.7e-17 92.4 196 38.8
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 3.7e-17 92.4 197 38.1
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 3.7e-17 92.4 197 38.6
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 6.4e-17 91.7 192 35.4
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 6.4e-17 91.7 198 38.9
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 6.4e-17 91.7 195 39.5
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 8.3e-17 91.3 198 37.9
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 1.1e-16 90.9 212 39.2
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 1.4e-16 90.5 203 37.9
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 1.4e-16 90.5 192 35.9
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 1.9e-16 90.1 198 36.9
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 1.9e-16 90.1 198 39.4
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 1.9e-16 90.1 200 38.5
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 2.4e-16 89.7 198 37.4
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 2.4e-16 89.7 199 37.7
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 3.2e-16 89.4 198 36.9
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 3.2e-16 89.4 201 38.8
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 4.1e-16 89.0 198 36.9
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 5.4e-16 88.6 191 37.2
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 7.1e-16 88.2 198 36.9
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 1.2e-15 87.4 195 38.5
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 1.2e-15 87.4 193 37.3
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 1.6e-15 87.0 193 37.3
Gohir.A01G226000 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.6e-15 87.0 191 36.6
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 2.1e-15 86.7 192 38.0
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 2.1e-15 86.7 196 36.7
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 2.7e-15 86.3 198 36.9
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 2.7e-15 86.3 200 37.0
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 3.5e-15 85.9 199 37.2
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 3.5e-15 85.9 197 37.6
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 3.5e-15 85.9 191 36.6
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 6.0e-15 85.1 198 36.9
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 6.0e-15 85.1 202 35.6
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 7.8e-15 84.7 197 37.6
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 1.3e-14 84.0 207 33.8
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 1.3e-14 84.0 195 35.9
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 1.3e-14 84.0 197 36.0
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 1.7e-14 83.6 189 38.1
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 2.3e-14 83.2 203 35.5
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 6.6e-14 81.6 202 34.2
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 8.6e-14 81.3 197 32.5
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 8.6e-14 81.3 202 32.7
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 1.1e-13 80.9 202 33.2
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 1.9e-13 80.1 195 34.4
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 1.9e-13 80.1 197 36.5
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 2.5e-13 79.7 199 32.7
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 4.3e-13 79.0 197 32.5
Lj5C50T14 Lonicera japonica HOM05D005962 ORTHO05D007325 4.3e-13 79.0 65 60.0
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 5.6e-13 78.6 203 34.0
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 7.3e-13 78.2 189 34.9
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 9.6e-13 77.8 202 36.1
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 9.6e-13 77.8 192 35.9
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 1.2e-12 77.4 196 32.1
arahy.Tifrunner.gnm1.ann1.0SY9SY Arachis hypogaea HOM05D017918 ORTHO05D019788 1.2e-12 77.4 41 87.8
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 1.2e-12 77.4 199 34.7
Cpa.g.sc131.1 Carica papaya HOM05D005962 ORTHO05D007325 1.2e-12 77.4 64 60.9
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 1.2e-12 77.4 205 32.2
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 1.6e-12 77.0 202 34.2
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 1.6e-12 77.0 197 33.0
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 2.1e-12 76.6 191 35.1
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 2.8e-12 76.3 188 33.0
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 4.7e-12 75.5 203 33.0
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 8.1e-12 74.7 213 31.9
ATR0705G221 Amborella trichopoda HOM05D005962 ORTHO05D007325 1.8e-11 73.6 67 56.7
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 1.5e-10 70.5 191 32.5
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 1.3e-09 67.4 226 31.0
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 1.7e-09 67.0 196 33.2
Ah.04g150140 Amaranthus hybridus HOM05D005962 ORTHO05D007325 2.9e-09 66.2 62 56.5
Migut.I00969 Erythranthe guttata HOM05D005962 ORTHO05D007325 8.4e-09 64.7 58 56.9
Migut.O00801 Erythranthe guttata HOM05D005962 ORTHO05D007325 8.4e-09 64.7 58 56.9
Cfa019374 Carpinus fangiana HOM05D005962 ORTHO05D007325 2.4e-08 63.2 59 59.3
Lsat_1_v5_gn_2_99820 Lactuca sativa HOM05D005962 ORTHO05D007325 2.4e-08 63.2 64 54.7
Pp3c11_22580 Physcomitrium patens HOM05D005962 ORTHO05D007325 1.2e-07 60.8 197 29.9
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis HOM05D005962 ORTHO05D007325 7.8e-07 58.2 67 47.8
Dinv30416 Davidia involucrata HOM05D005962 ORTHO05D007325 7.8e-07 58.2 53 58.5
Lj3g0016976 Lotus japonicus HOM05D005962 ORTHO05D007325 2.3e-06 56.6 184 33.2
Mapoly0012s0176 Marchantia polymorpha HOM05D005962 ORTHO05D007325 8.7e-06 54.7 71 46.5


User provided reference genes

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