Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007962g0010 Nicotiana tabacum HOM05D001987 ORTHO05D006514 1.3e-32 142.5 72 100.0
Nitab4.5_0007876g0050 Nicotiana tabacum HOM05D001987 ORTHO05D006514 3.9e-26 120.9 64 93.8
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 2.9e-21 104.8 66 87.9
Peaxi162Scf01098g00013 Petunia axillaris HOM05D001987 ORTHO05D006514 2.9e-21 104.8 66 87.9
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.4e-21 103.2 66 86.4
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.4e-21 103.2 66 86.4
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.4e-21 103.2 66 86.4
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.4e-21 103.2 66 86.4
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.4e-21 103.2 66 86.4
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 8.4e-21 103.2 66 86.4
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 1.1e-20 102.8 62 90.3
Lj2P1230T111 Lonicera japonica HOM05D001987 ORTHO05D006514 1.1e-20 102.8 62 90.3
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 1.9e-20 102.1 66 84.8
Hma1.2p1_0105F.1_g050680 Hydrangea macrophylla HOM05D001987 ORTHO05D006514 2.5e-20 101.7 66 86.4
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 4.2e-20 100.9 66 86.4
Nitab4.5_0009561g0020 Nicotiana tabacum HOM05D001987 ORTHO05D006514 4.2e-20 100.9 66 84.8
Solyc08g045870.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.3e-20 99.8 58 87.9
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 2.7e-19 98.2 66 83.3
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 2.7e-19 98.2 66 83.3
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 2.7e-19 98.2 66 83.3
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 2.7e-19 98.2 66 83.3
Lsat_1_v5_gn_8_132861 Lactuca sativa HOM05D001987 ORTHO05D006514 2.7e-19 98.2 66 83.3
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 4.6e-19 97.4 66 83.3
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 4.6e-19 97.4 66 83.3
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 4.6e-19 97.4 66 83.3
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 1.0e-18 96.3 66 81.8
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 1.3e-18 95.9 66 81.8
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 6.7e-18 93.6 66 81.8
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 6.7e-18 93.6 66 81.8
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 6.7e-18 93.6 66 81.8
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 6.7e-18 93.6 66 81.8
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 6.7e-18 93.6 66 80.3
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 6.7e-18 93.6 66 80.3
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 3.3e-17 91.3 66 78.8
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 7.4e-17 90.1 66 78.8
Gohir.A13G113500 Gossypium hirsutum HOM05D001987 ORTHO05D006514 9.7e-17 89.7 54 87.0
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 9.7e-17 89.7 54 87.0
Nitab4.5_0000309g0180 Nicotiana tabacum HOM05D001987 ORTHO05D005620 9.7e-17 89.7 70 77.1
ClCG08G015640 Citrullus lanatus HOM05D001987 ORTHO05D006514 2.2e-16 88.6 62 80.6
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 2.8e-16 88.2 62 80.6
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 8.2e-16 86.7 66 80.3
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 8.2e-16 86.7 66 74.2
ATR0661G567 Amborella trichopoda HOM05D001987 ORTHO05D006514 2.4e-15 85.1 66 69.7
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 2.4e-15 85.1 66 75.8
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.1e-15 84.3 66 71.2
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.1e-15 84.3 66 71.2
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.1e-15 84.3 66 71.2
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.1e-15 84.3 66 71.2
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 4.1e-15 84.3 66 71.2
Nitab4.5_0000334g0030 Nicotiana tabacum HOM05D001987 ORTHO05D006514 9.0e-15 83.2 54 81.5
SEGI_40200 Sequoiadendron giganteum HOM05D001987 ORTHO05D006514 9.0e-15 83.2 66 72.7
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 5.9e-14 80.5 57 78.9
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 5.9e-14 80.5 57 78.9
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 5.9e-14 80.5 57 78.9
Dinv35896 Davidia involucrata HOM05D001987 ORTHO05D006514 7.7e-14 80.1 58 75.9
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 1.0e-13 79.7 66 72.7
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 1.3e-13 79.3 68 67.6
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 3.8e-13 77.8 66 69.7
Ah.10g028690 Amaranthus hybridus HOM05D001987 ORTHO05D006514 3.8e-13 77.8 66 69.7
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 8.5e-13 76.6 57 77.2
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 8.5e-13 76.6 57 77.2
Solyc05g045828.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.5e-12 73.9 42 90.5
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 9.4e-12 73.2 54 70.4
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 1.2e-11 72.8 62 66.1
PSO675G5335 Papaver somniferum HOM05D001987 ORTHO05D006514 1.2e-11 72.8 62 66.1
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 9.7e-09 63.2 57 66.7
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 1.3e-08 62.8 48 70.8
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.5e-06 55.8 66 54.5
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 3.4e-06 54.7 43 76.7


User provided reference genes

Program Settings