Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 2.9e-64 248.4 129 100.0
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 2.9e-64 248.4 129 100.0
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 5.5e-63 244.2 129 98.4
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 7.9e-62 240.4 126 97.6
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 7.9e-62 240.4 126 97.6
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 7.9e-62 240.4 126 97.6
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 2.3e-61 238.8 125 97.6
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 2.8e-59 231.9 126 94.4
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 3.1e-58 228.4 129 89.9
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 6.9e-58 227.3 129 88.4
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 6.9e-58 227.3 129 88.4
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 6.9e-58 227.3 129 88.4
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 3.4e-57 224.9 129 88.4
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 4.5e-57 224.6 129 88.4
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 1.0e-56 223.4 129 88.4
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 2.2e-56 222.2 129 86.0
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 3.8e-56 221.5 130 88.5
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 3.8e-56 221.5 129 89.1
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 5.0e-56 221.1 129 84.5
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 8.5e-56 220.3 131 86.3
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 8.5e-56 220.3 129 84.5
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 3.2e-55 218.4 128 86.7
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 3.2e-55 218.4 129 87.6
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 2.1e-54 215.7 129 84.5
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 4.7e-54 214.5 129 84.5
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 4.7e-54 214.5 129 82.9
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 6.1e-54 214.2 131 83.2
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.0e-53 213.4 129 83.7
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 2.3e-53 212.2 129 82.9
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 3.0e-53 211.8 129 81.4
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 3.9e-53 211.5 147 75.5
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 5.2e-53 211.1 129 82.9
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 1.1e-52 209.9 136 78.7
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 1.5e-52 209.5 129 81.4
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 1.5e-52 209.5 125 86.4
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 2.6e-52 208.8 130 83.8
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 3.3e-52 208.4 133 82.0
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 1.3e-51 206.5 129 79.8
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 1.3e-51 206.5 129 81.4
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 2.8e-51 205.3 130 80.8
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 3.7e-51 204.9 129 79.8
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 4.8e-51 204.5 126 81.0
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 1.1e-50 203.4 130 79.2
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 1.1e-50 203.4 130 80.8
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 1.4e-50 203.0 130 80.8
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 1.4e-50 203.0 131 79.4
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 2.4e-50 202.2 126 81.0
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 2.4e-50 202.2 124 79.0
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 3.1e-50 201.8 124 79.8
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 5.3e-50 201.1 130 80.0
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 5.3e-50 201.1 131 78.6
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 5.3e-50 201.1 124 79.8
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 5.3e-50 201.1 140 76.4
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 9.1e-50 200.3 130 79.2
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 1.2e-49 199.9 124 79.0
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 2.0e-49 199.1 129 81.4
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 2.0e-49 199.1 129 80.6
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 4.5e-49 198.0 124 79.0
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 1.3e-48 196.4 130 75.4
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 1.7e-48 196.1 131 77.1
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 2.2e-48 195.7 124 79.0
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 2.2e-48 195.7 124 79.0
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 3.8e-48 194.9 124 77.4
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 6.5e-48 194.1 124 78.2
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 8.5e-48 193.7 132 74.2
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 1.1e-47 193.4 124 76.6
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 1.1e-47 193.4 124 77.4
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 1.5e-47 193.0 124 76.6
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 3.2e-47 191.8 124 76.6
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 3.2e-47 191.8 129 79.8
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 4.2e-47 191.4 123 77.2
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 5.5e-47 191.0 132 73.5
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 9.4e-47 190.3 124 75.8
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 2.1e-46 189.1 122 76.2
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 2.7e-46 188.7 124 75.0
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 3.6e-46 188.3 118 78.0
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 3.6e-46 188.3 130 74.6
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 4.7e-46 188.0 130 73.1
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 4.7e-46 188.0 118 78.0
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 4.7e-46 188.0 124 76.6
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 8.0e-46 187.2 124 74.2
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 1.0e-45 186.8 130 72.3
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 1.0e-45 186.8 167 62.3
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 1.0e-45 186.8 132 75.0
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 1.8e-45 186.0 122 76.2
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 2.3e-45 185.7 130 73.1
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 4.0e-45 184.9 124 72.6
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 5.2e-45 184.5 125 76.0
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 6.7e-45 184.1 122 75.4
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 6.7e-45 184.1 118 76.3
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 8.8e-45 183.7 118 76.3
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 8.8e-45 183.7 118 76.3
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 1.2e-44 183.3 107 85.0
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 2.0e-44 182.6 124 73.4
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 2.0e-44 182.6 126 70.6
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 4.4e-44 181.4 131 71.0
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 9.7e-44 180.3 107 83.2
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 9.7e-44 180.3 124 71.0
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 1.3e-43 179.9 121 72.7
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 2.7e-41 172.2 156 62.8
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 2.7e-41 172.2 128 68.0
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 2.7e-41 172.2 128 68.0
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 2.7e-41 172.2 128 68.0
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 2.7e-41 172.2 122 70.5
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 5.9e-41 171.0 129 67.4
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 7.7e-41 170.6 124 68.5
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 1.3e-40 169.9 120 70.0
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 1.7e-40 169.5 105 78.1
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 2.2e-40 169.1 115 72.2
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 2.2e-40 169.1 115 72.2
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 3.8e-40 168.3 120 71.7
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 3.8e-40 168.3 124 67.7
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 1.1e-39 166.8 125 67.2
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 1.5e-39 166.4 125 72.8
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 1.9e-39 166.0 117 70.9
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 5.5e-39 164.5 123 66.7
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 7.2e-39 164.1 120 71.7
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 9.4e-39 163.7 110 71.8
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 9.4e-39 163.7 167 53.3
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 2.1e-38 162.5 120 68.3
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 2.1e-38 162.5 95 83.2
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 3.6e-38 161.8 124 65.3
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 6.1e-38 161.0 92 87.0
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 8.0e-38 160.6 104 76.0
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 8.0e-38 160.6 113 71.7
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.8e-37 159.5 109 71.6
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 5.2e-37 157.9 109 70.6
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 5.2e-37 157.9 128 63.3
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 8.8e-37 157.1 110 67.3
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.2e-36 156.8 114 66.7
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 2.6e-36 155.6 111 66.7
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 3.4e-36 155.2 162 54.3
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 1.3e-35 153.3 96 79.2
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 7.0e-34 147.5 93 79.6
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 4.5e-33 144.8 101 68.3
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 5.9e-33 144.4 87 79.3
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 5.0e-32 141.4 82 86.6
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 1.9e-31 139.4 116 60.3
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 2.5e-31 139.0 90 74.4
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 9.5e-31 137.1 124 61.3
HanXRQChr04g0094601 Helianthus annuus HOM05D004786 ORTHO05D005582 2.1e-30 136.0 84 84.5
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 6.1e-30 134.4 124 61.3
PGSC0003DMG400028899 Solanum tuberosum HOM05D000457 ORTHO05D000560 2.3e-29 132.5 78 85.9
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 4.0e-29 131.7 81 80.2
Solyc06g036200.2 Solanum lycopersicum HOM05D004786 ORTHO05D005582 7.8e-25 117.5 95 65.3
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 6.6e-24 114.4 63 82.5
BcaB03g13505 Brassica carinata HOM05D004786 ORTHO05D005582 1.1e-23 113.6 76 71.1
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 1.1e-23 113.6 92 62.0
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 1.1e-23 113.6 105 53.3
MD02G1287100 Malus domestica HOM05D004786 ORTHO05D005582 2.5e-23 112.5 69 78.3
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 1.2e-22 110.2 61 88.5
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea HOM05D004786 ORTHO05D005582 4.9e-19 98.2 124 49.2
Dinv10078 Davidia involucrata HOM05D004786 ORTHO05D005582 1.8e-18 96.3 52 90.4
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 4.1e-18 95.1 103 43.7
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 2.3e-16 89.4 89 48.3
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 3.6e-14 82.0 114 42.1
MD02G1287200 Malus domestica HOM05D004786 ORTHO05D005582 1.1e-10 70.5 47 72.3
Cfa022415 Carpinus fangiana HOM05D004786 ORTHO05D005582 9.2e-10 67.4 93 35.5
Gohir.D07G231500 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.2e-09 67.0 65 55.4
SEGI_38506 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.6e-09 66.6 35 91.4
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 2.8e-06 55.8 114 29.8


User provided reference genes

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