Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007774g0090 Nicotiana tabacum HOM05D003169 ORTHO05D036887 2.8e-76 288.5 143 100.0
Nitab4.5_0003291g0060 Nicotiana tabacum HOM05D003169 ORTHO05D003700 3.5e-26 122.1 109 60.6
Nitab4.5_0007774g0020 Nicotiana tabacum HOM05D003169 ORTHO05D003700 5.0e-25 118.2 107 59.8
Solyc10g005490.4 Solanum lycopersicum HOM05D003169 ORTHO05D003700 8.0e-23 110.9 108 55.6
Sopen10g001470 Solanum pennellii HOM05D003169 ORTHO05D003700 8.0e-23 110.9 108 55.6
CAN.G492.81 Capsicum annuum HOM05D003169 ORTHO05D003700 1.8e-22 109.8 108 55.6
Peaxi162Scf00670g00216 Petunia axillaris HOM05D003169 ORTHO05D003700 4.4e-21 105.1 108 54.6
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 1.9e-19 99.8 108 53.7
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 6.0e-18 94.7 108 51.9
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 3.0e-17 92.4 108 50.9
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 3.9e-17 92.0 108 50.0
Nitab4.5_0020695g0020 Nicotiana tabacum HOM05D003169 ORTHO05D036887 3.9e-17 92.0 141 45.4
Ciclev10004277m.g Citrus clementina HOM05D003169 ORTHO05D003700 8.6e-17 90.9 108 48.1
Cc00_g09100 Coffea canephora HOM05D003169 ORTHO05D003700 1.1e-16 90.5 117 46.2
Cpa.g.sc32.149 Carica papaya HOM05D003169 ORTHO05D003700 3.3e-16 89.0 107 49.5
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 3.3e-16 89.0 107 48.6
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 5.6e-16 88.2 108 49.1
Actinidia26204 Actinidia chinensis HOM05D003169 ORTHO05D003700 7.3e-16 87.8 108 46.3
Peaxi162Scf00420g00518 Petunia axillaris HOM05D003169 ORTHO05D003700 1.2e-15 87.0 108 45.4
vmacro22494 Vaccinium macrocarpon HOM05D003169 ORTHO05D003700 1.6e-15 86.7 107 47.7
CiPaw.15G111900 Carya illinoinensis HOM05D003169 ORTHO05D003700 2.1e-15 86.3 108 45.4
Duzib213G0284 Durio zibethinus HOM05D003169 ORTHO05D003700 2.1e-15 86.3 108 48.1
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 6.2e-15 84.7 109 45.9
Nn7g38410 Nelumbo nucifera HOM05D003169 ORTHO05D003700 6.2e-15 84.7 102 48.0
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 6.2e-15 84.7 108 47.2
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 8.1e-15 84.3 108 47.2
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 8.1e-15 84.3 108 47.2
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 8.1e-15 84.3 108 47.2
HanXRQChr03g0077801 Helianthus annuus HOM05D003169 ORTHO05D003700 8.1e-15 84.3 109 45.9
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla HOM05D003169 ORTHO05D003700 8.1e-15 84.3 108 45.4
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 1.4e-14 83.6 109 45.9
RcHm_v2.0_Chr5g0023151 Rosa chinensis HOM05D003169 ORTHO05D003700 1.4e-14 83.6 108 47.2
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 1.8e-14 83.2 108 47.2
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 1.8e-14 83.2 108 47.2
ECA240G3251 Erigeron canadensis HOM05D003169 ORTHO05D003700 3.1e-14 82.4 109 45.0
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 8.9e-14 80.9 116 38.8
Haze_18485 Corylus avellana HOM05D003169 ORTHO05D003700 8.9e-14 80.9 102 46.1
FvH4_3g13920 Fragaria vesca HOM05D003169 ORTHO05D003700 8.9e-14 80.9 109 44.0
FAN16G1231 Fragaria x ananassa HOM05D003169 ORTHO05D003700 8.9e-14 80.9 109 44.0
FAN21G1262 Fragaria x ananassa HOM05D003169 ORTHO05D003700 8.9e-14 80.9 109 44.0
FAN25G3213 Fragaria x ananassa HOM05D003169 ORTHO05D003700 8.9e-14 80.9 109 44.0
Oeu025995.1 Olea europaea HOM05D003169 ORTHO05D003700 8.9e-14 80.9 108 46.3
Potri.008G081200 Populus trichocarpa HOM05D003169 ORTHO05D003700 8.9e-14 80.9 108 46.3
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 1.5e-13 80.1 105 43.8
VMungo1127G0192 Vigna mungo HOM05D003169 ORTHO05D003700 2.0e-13 79.7 109 44.0
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 2.6e-13 79.3 108 43.5
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 3.4e-13 79.0 109 43.1
MBI18_g40795_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 3.4e-13 79.0 109 43.1
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 3.4e-13 79.0 98 44.9
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 3.4e-13 79.0 98 44.9
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 4.4e-13 78.6 108 43.5
Lsat_1_v5_gn_7_69060 Lactuca sativa HOM05D003169 ORTHO05D003700 4.4e-13 78.6 111 45.0
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 5.8e-13 78.2 102 45.1
MSTRG.7098 Avicennia marina HOM05D003169 ORTHO05D003700 7.5e-13 77.8 98 44.9
Oeu005060.1 Olea europaea HOM05D003169 ORTHO05D003700 7.5e-13 77.8 109 44.0
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 7.5e-13 77.8 108 43.5
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 9.9e-13 77.4 102 45.1
Aqoxy1G01380 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 1.3e-12 77.0 110 38.2
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 1.3e-12 77.0 98 44.9
Eucgr.F04478 Eucalyptus grandis HOM05D003169 ORTHO05D003700 1.7e-12 76.6 104 44.2
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 4.9e-12 75.1 108 41.7
Aa31LG4G1680 Aethionema arabicum HOM05D003169 ORTHO05D003700 8.3e-12 74.3 119 41.2
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 8.3e-12 74.3 108 41.7
DCAR_016853 Daucus carota HOM05D003169 ORTHO05D003700 1.1e-11 73.9 96 42.7
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 1.4e-11 73.6 108 42.6
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 1.4e-11 73.6 108 41.7
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 1.9e-11 73.2 109 38.5
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 1.9e-11 73.2 109 38.5
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 1.9e-11 73.2 108 40.7
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 2.4e-11 72.8 116 39.7
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 3.2e-11 72.4 108 39.8
Oeu029454.1 Olea europaea HOM05D003169 ORTHO05D003700 3.2e-11 72.4 97 42.3
HPP92_005947 Vanilla planifolia HOM05D003169 ORTHO05D003700 3.2e-11 72.4 108 44.4
Ah.16g106160 Amaranthus hybridus HOM05D003169 ORTHO05D003700 9.2e-11 70.9 108 42.6
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 9.2e-11 70.9 108 41.7
Thhalv10018021m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 1.2e-10 70.5 98 40.8
SGA_v2.0_scaffold186G40168 Striga asiatica HOM05D003169 ORTHO05D003700 1.2e-10 70.5 97 41.2
CARHR073010 Cardamine hirsuta HOM05D003169 ORTHO05D003700 1.6e-10 70.1 109 39.4
CsaV3_6G013370 Cucumis sativus L. HOM05D003169 ORTHO05D003700 1.6e-10 70.1 108 42.6
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 1.6e-10 70.1 109 39.4
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 1.6e-10 70.1 108 39.8
MELO3C019615.2 Cucumis melo HOM05D003169 ORTHO05D003700 2.1e-10 69.7 107 43.0
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 6.0e-10 68.2 106 42.5
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 6.0e-10 68.2 97 39.2
BcaC08g47495 Brassica carinata HOM05D003169 ORTHO05D003700 1.0e-09 67.4 111 36.9
A07p44430 Brassica napus HOM05D003169 ORTHO05D003700 1.0e-09 67.4 111 36.9
C06p53240 Brassica napus HOM05D003169 ORTHO05D003700 1.0e-09 67.4 111 36.9
BolC6t40342H Brassica oleracea HOM05D003169 ORTHO05D003700 1.0e-09 67.4 111 36.9
BraA07t31952Z Brassica rapa HOM05D003169 ORTHO05D003700 1.0e-09 67.4 111 36.9
Migut.M01496 Erythranthe guttata HOM05D003169 ORTHO05D003700 1.3e-09 67.0 98 39.8
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 1.7e-09 66.6 103 41.7
BcaB02g08679 Brassica carinata HOM05D003169 ORTHO05D003700 2.3e-09 66.2 111 36.0
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 2.3e-09 66.2 97 39.2
Sp5g34410 Schrenkiella parvula HOM05D003169 ORTHO05D003700 3.0e-09 65.9 96 39.6
ATR0794G028 Amborella trichopoda HOM05D003169 ORTHO05D003700 3.9e-09 65.5 112 37.5
AT1G79350 Arabidopsis thaliana HOM05D003169 ORTHO05D003700 6.6e-09 64.7 98 38.8
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 6.6e-09 64.7 103 40.8
PSO675G7315 Papaver somniferum HOM05D003169 ORTHO05D003700 9.5e-08 60.8 97 40.2
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 2.4e-06 56.2 103 33.0


User provided reference genes

Program Settings