Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007685g0030 Nicotiana tabacum HOM05D012063 ORTHO05D036866 1.1e-55 219.5 100 100.0
Nitab4.5_0006480g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.2e-26 121.3 119 47.1
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 1.5e-20 102.8 120 40.8
Nitab4.5_0005029g0020 Nicotiana tabacum HOM05D011511 ORTHO05D000022 4.5e-20 101.3 120 42.5
Nitab4.5_0008817g0010 Nicotiana tabacum HOM05D012063 ORTHO05D016351 6.4e-19 97.4 44 88.6
Nitab4.5_0000209g0060 Nicotiana tabacum HOM05D012063 ORTHO05D016351 1.4e-18 96.3 48 81.2
Nitab4.5_0005970g0030 Nicotiana tabacum HOM05D000032 ORTHO05D006669 9.3e-18 93.6 119 36.1
Nitab4.5_0003903g0050 Nicotiana tabacum HOM05D012063 ORTHO05D016351 6.0e-17 90.9 99 41.4
Nitab4.5_0000023g0150 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.1e-15 86.7 110 38.2
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 5.6e-15 84.3 110 36.4
PGSC0003DMG400040069 Solanum tuberosum HOM05D000155 ORTHO05D000022 5.6e-15 84.3 116 33.6
PGSC0003DMG400008628 Solanum tuberosum HOM05D000155 ORTHO05D000022 7.4e-15 84.0 116 37.1
Cc00_g20180 Coffea canephora HOM05D000155 ORTHO05D000022 1.3e-14 83.2 117 35.0
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-14 82.4 117 35.9
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 2.8e-14 82.0 117 35.9
Cc00_g03270 Coffea canephora HOM05D000155 ORTHO05D000022 3.7e-14 81.6 117 36.8
PGSC0003DMG400010787 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.2e-14 80.9 116 33.6
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 6.2e-14 80.9 116 32.8
Sopen04g014310 Solanum pennellii HOM05D000155 ORTHO05D000022 8.1e-14 80.5 117 33.3
Cc00_g15230 Coffea canephora HOM05D000155 ORTHO05D000022 1.4e-13 79.7 119 30.3
Cc00_g21050 Coffea canephora HOM05D000155 ORTHO05D000022 1.4e-13 79.7 119 30.3
Cc00_g24940 Coffea canephora HOM05D000155 ORTHO05D000022 1.4e-13 79.7 119 30.3
Cc06_g22510 Coffea canephora HOM05D000155 ORTHO05D000022 1.4e-13 79.7 119 30.3
Nitab4.5_0000031g0460 Nicotiana tabacum HOM05D009916 ORTHO05D000022 1.8e-13 79.3 97 37.1
Nitab4.5_0000417g0090 Nicotiana tabacum HOM05D009916 ORTHO05D000022 3.1e-13 78.6 121 29.8
Nitab4.5_0000512g0090 Nicotiana tabacum HOM05D011511 ORTHO05D000022 3.1e-13 78.6 108 34.3
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 6.9e-13 77.4 117 29.9
Cc03_g15170 Coffea canephora HOM05D000025 ORTHO05D000022 9.0e-13 77.0 119 28.6
Nitab4.5_0004849g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.0e-13 77.0 103 38.8
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 9.0e-13 77.0 117 33.3
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 9.0e-13 77.0 117 33.3
Sopen11g008050 Solanum pennellii HOM05D000155 ORTHO05D000022 1.5e-12 76.3 117 32.5
Nitab4.5_0000249g0360 Nicotiana tabacum HOM05D009916 ORTHO05D000022 2.0e-12 75.9 116 30.2
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-12 75.9 116 31.0
PGSC0003DMG400037811 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.6e-12 75.5 117 29.1
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 3.4e-12 75.1 117 32.5
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 3.4e-12 75.1 111 34.2
PGSC0003DMG401009742 Solanum tuberosum HOM05D001426 ORTHO05D001389 4.5e-12 74.7 113 32.7
Nitab4.5_0002595g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.6e-12 73.9 63 47.6
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-11 73.6 117 31.6
Nitab4.5_0001653g0020 Nicotiana tabacum HOM05D009916 ORTHO05D014164 1.3e-11 73.2 111 31.5
Nitab4.5_0008471g0050 Nicotiana tabacum HOM05D011511 ORTHO05D000022 1.3e-11 73.2 108 36.1
Peaxi162Scf00024g02012 Petunia axillaris HOM05D000155 ORTHO05D000022 1.3e-11 73.2 100 37.0
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 1.3e-11 73.2 117 30.8
Lj2P663T6 Lonicera japonica HOM05D000155 ORTHO05D000022 1.7e-11 72.8 117 29.1
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.2e-11 72.4 116 31.0
Nitab4.5_0000025g0630 Nicotiana tabacum HOM05D012063 ORTHO05D016351 2.9e-11 72.0 62 45.2
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-11 72.0 116 32.8
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 2.9e-11 72.0 117 29.1
Nitab4.5_0000044g0580 Nicotiana tabacum HOM05D012063 ORTHO05D036866 3.8e-11 71.6 41 65.9
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 8.4e-11 70.5 116 29.3
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-10 69.7 117 30.8
Nitab4.5_0011737g0010 Nicotiana tabacum HOM05D012063 ORTHO05D000022 1.9e-10 69.3 47 53.2
Peaxi162Scf00108g00112 Petunia axillaris HOM05D000155 ORTHO05D000022 2.5e-10 68.9 42 59.5
Nitab4.5_0004341g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.2e-10 68.6 98 33.7
Lj7P241T13 Lonicera japonica HOM05D000155 ORTHO05D000022 4.2e-10 68.2 117 29.1
Aqoxy5G02155 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 5.5e-10 67.8 119 29.4
Aqoxy5G03038 Aquilegia oxysepala HOM05D000003 ORTHO05D000022 5.5e-10 67.8 119 29.4
Nitab4.5_0006852g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.1e-10 67.4 77 39.0
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.1e-10 67.4 111 28.8
MBI14_g13369_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.3e-10 67.0 120 30.8
Nitab4.5_0000543g0240 Nicotiana tabacum HOM05D012063 ORTHO05D016351 1.2e-09 66.6 43 55.8
Nitab4.5_0001442g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-09 66.6 44 56.8
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 1.6e-09 66.2 117 29.9
MBI17_g24537_MAGBIO Magnolia biondii HOM05D000531 ORTHO05D000877 2.1e-09 65.9 120 29.2
Nitab4.5_0000453g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.1e-09 65.9 93 37.6
Nitab4.5_0000902g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-09 65.9 39 56.4
MBI17_g12074_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-09 65.5 123 30.9
Aqoxy3G02607 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 3.5e-09 65.1 118 29.7
Peaxi162Scf00108g00111 Petunia axillaris HOM05D012063 ORTHO05D016351 3.5e-09 65.1 38 60.5
Peaxi162Scf00552g00012 Petunia axillaris HOM05D001426 ORTHO05D001389 3.5e-09 65.1 111 30.6
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 3.5e-09 65.1 117 29.1
PGSC0003DMG400021434 Solanum tuberosum HOM05D001426 ORTHO05D000022 3.5e-09 65.1 107 32.7
TAR014G0002 Trochodendron aralioides HOM05D000155 ORTHO05D000022 3.5e-09 65.1 119 31.1
Aqoxy1G03720 Aquilegia oxysepala HOM05D000003 ORTHO05D000022 4.6e-09 64.7 117 32.5
MBI04_g08948_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.6e-09 64.7 119 29.4
Peaxi162Scf00172g00144 Petunia axillaris HOM05D001426 ORTHO05D001389 4.6e-09 64.7 104 32.7
Aqoxy4G02372 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.0e-09 64.3 118 26.3
Peaxi162Scf00056g00119 Petunia axillaris HOM05D001426 ORTHO05D001389 6.0e-09 64.3 111 31.5
Aqoxy5G03269 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 1.0e-08 63.5 114 35.1
MBI04_g35064_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-08 63.5 123 28.5
MBI14_g30956_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-08 63.5 124 31.5
Nitab4.5_0001269g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.0e-08 63.5 66 45.5
MBI15_g35008_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.3e-08 63.2 120 29.2
MBI11_g05091_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.8e-08 62.8 102 35.3
Peaxi162Scf00059g00130 Petunia axillaris HOM05D001426 ORTHO05D001389 1.8e-08 62.8 91 36.3
SHI49929 Sapria himalayana HOM05D000024 ORTHO05D000022 2.3e-08 62.4 114 27.2
Lj7P711T40 Lonicera japonica HOM05D000155 ORTHO05D000022 3.0e-08 62.0 117 28.2
Nitab4.5_0001568g0010 Nicotiana tabacum HOM05D009916 ORTHO05D014164 3.9e-08 61.6 103 28.2
Nitab4.5_0010557g0030 Nicotiana tabacum HOM05D009916 ORTHO05D000022 3.9e-08 61.6 95 31.6
PGSC0003DMG400015911 Solanum tuberosum HOM05D000003 ORTHO05D001389 3.9e-08 61.6 111 27.0
MBI05_g34740_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.1e-08 61.2 103 32.0
Peaxi162Scf00091g01817 Petunia axillaris HOM05D000155 ORTHO05D000022 5.1e-08 61.2 81 34.6
Nitab4.5_0003875g0070 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.7e-08 60.8 43 55.8
SHI33435 Sapria himalayana HOM05D000024 ORTHO05D000022 6.7e-08 60.8 116 31.0
Cc00_g05820 Coffea canephora HOM05D000155 ORTHO05D000022 8.7e-08 60.5 97 33.0
SHI49575 Sapria himalayana HOM05D000024 ORTHO05D000022 1.1e-07 60.1 119 31.1
MBI13_g21845_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 1.5e-07 59.7 126 28.6
SHI38559 Sapria himalayana HOM05D000024 ORTHO05D000022 1.5e-07 59.7 119 30.3
CiPaw.04G137600 Carya illinoinensis HOM05D000155 ORTHO05D000022 1.9e-07 59.3 118 25.4
MBI04_g10396_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.5e-07 58.9 121 32.2
Nitab4.5_0005614g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.5e-07 58.9 87 37.9
PGSC0003DMG400037922 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.5e-07 58.9 112 29.5
MBI01_g27612_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.3e-07 58.5 123 29.3
MBI17_g44068_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 3.3e-07 58.5 114 28.9
Nitab4.5_0001010g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.3e-07 58.5 92 30.4
SHI27828 Sapria himalayana HOM05D000024 ORTHO05D000022 3.3e-07 58.5 115 29.6
SHI44260 Sapria himalayana HOM05D000024 ORTHO05D000022 3.3e-07 58.5 116 30.2
Sopen11g007910 Solanum pennellii HOM05D017709 ORTHO05D026164 3.3e-07 58.5 54 38.9
Nitab4.5_0000211g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.3e-07 58.2 85 38.8
SHI15709 Sapria himalayana HOM05D000024 ORTHO05D000007 4.3e-07 58.2 117 29.1
Nitab4.5_0007662g0020 Nicotiana tabacum HOM05D000801 ORTHO05D001389 5.7e-07 57.8 106 31.1
Peaxi162Scf00169g00165 Petunia axillaris HOM05D001426 ORTHO05D001389 5.7e-07 57.8 50 46.0
MBI01_g02763_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.4e-07 57.4 103 33.0
MBI08_g12698_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.4e-07 57.4 121 26.4
CiPaw.15G160400 Carya illinoinensis HOM05D000003 ORTHO05D000004 9.6e-07 57.0 120 24.2
MBI15_g35733_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.6e-07 57.0 123 28.5
MBI17_g29795_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.6e-07 57.0 105 34.3
Nitab4.5_0000061g0260 Nicotiana tabacum HOM05D001426 ORTHO05D001389 9.6e-07 57.0 65 44.6
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 9.6e-07 57.0 41 48.8
Sopen12g016250 Solanum pennellii HOM05D000003 ORTHO05D000004 9.6e-07 57.0 46 41.3
MBI11_g24786_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.3e-06 56.6 127 26.0
MBI14_g11584_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.3e-06 56.6 96 31.2
MBI16_g06664_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 1.3e-06 56.6 119 28.6
PGSC0003DMG400045175 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.3e-06 56.6 38 47.4
Peaxi162Scf00031g01518 Petunia axillaris HOM05D012063 ORTHO05D016351 1.6e-06 56.2 29 69.0
PGSC0003DMG400007590 Solanum tuberosum HOM05D001426 ORTHO05D001389 1.6e-06 56.2 55 45.5
PGSC0003DMG400039694 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.6e-06 56.2 38 47.4
SHI38759 Sapria himalayana HOM05D000024 ORTHO05D000022 2.1e-06 55.8 101 30.7
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-06 55.8 46 41.3
MBI15_g44988_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.8e-06 55.5 124 26.6
MBI17_g21963_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.8e-06 55.5 123 27.6
Sopen08g015470 Solanum pennellii HOM05D000155 ORTHO05D000022 2.8e-06 55.5 38 44.7
Lju515C0G5 Lonicera japonica HOM05D013435 ORTHO05D013087 3.7e-06 55.1 85 30.6
MBI18_g09840_MAGBIO Magnolia biondii HOM05D002057 ORTHO05D000022 3.7e-06 55.1 124 25.8
MBI18_g21787_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.7e-06 55.1 106 28.3
Nitab4.5_0001257g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.7e-06 55.1 65 36.9
Nitab4.5_0001351g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.7e-06 55.1 91 35.2
Nitab4.5_0007880g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.7e-06 55.1 54 38.9
SHI32638 Sapria himalayana HOM05D004990 ORTHO05D000022 3.7e-06 55.1 78 34.6
Nitab4.5_0000177g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.8e-06 54.7 43 41.9
Nitab4.5_0011198g0030 Nicotiana tabacum HOM05D012063 ORTHO05D016351 4.8e-06 54.7 37 54.1
SHI41244 Sapria himalayana HOM05D000024 ORTHO05D000022 4.8e-06 54.7 117 28.2
Sopen08g015490 Solanum pennellii HOM05D000003 ORTHO05D000022 4.8e-06 54.7 38 47.4
Sopen10g010450 Solanum pennellii HOM05D000003 ORTHO05D000004 4.8e-06 54.7 38 47.4
MBI09_g16156_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.2e-06 54.3 117 29.9
MBI09_g24463_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.2e-06 54.3 112 30.4
MBI14_g05414_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.2e-06 54.3 86 34.9
MBI18_g20209_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.2e-06 54.3 116 26.7
Peaxi162Scf00188g00934 Petunia axillaris HOM05D000155 ORTHO05D000022 6.2e-06 54.3 56 55.4
Nitab4.5_0000015g0190 Nicotiana tabacum HOM05D012063 ORTHO05D036866 8.2e-06 53.9 47 40.4
Nitab4.5_0000153g0160 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.2e-06 53.9 78 35.9
Sopen06g012050 Solanum pennellii HOM05D000155 ORTHO05D000022 8.2e-06 53.9 38 47.4


User provided reference genes

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