Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 9.1e-190 666.8 342 100.0
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 2.7e-178 628.6 342 94.7
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 1.4e-161 573.2 342 87.7
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 6.8e-161 570.9 342 87.7
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 1.8e-158 562.8 342 86.5
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 1.9e-155 552.7 342 84.5
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 2.6e-152 542.3 342 83.9
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 4.3e-115 418.7 319 69.0
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 1.1e-113 414.1 352 64.8
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 3.8e-111 405.6 344 64.5
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 9.3e-110 401.0 351 63.2
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 3.5e-109 399.1 342 65.2
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 1.0e-108 397.5 352 61.9
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 2.3e-108 396.4 338 64.5
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 3.0e-108 396.0 347 63.4
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 2.5e-107 392.9 350 61.1
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 7.4e-107 391.3 351 61.8
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 4.8e-106 388.7 350 60.3
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 5.3e-105 385.2 349 59.6
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 2.6e-104 382.9 345 62.3
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 1.7e-103 380.2 347 59.9
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 1.7e-103 380.2 360 59.7
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 6.5e-103 378.3 348 59.8
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 6.5e-103 378.3 355 58.9
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 1.9e-102 376.7 361 59.0
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 5.5e-102 375.2 346 59.2
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 1.6e-101 373.6 299 64.5
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 4.6e-101 372.1 342 61.1
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 1.0e-100 370.9 328 63.4
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 3.0e-100 369.4 342 59.9
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 5.1e-100 368.6 347 60.5
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 6.7e-100 368.2 297 64.6
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 1.9e-99 366.7 347 57.6
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 1.9e-99 366.7 344 60.8
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 4.3e-99 365.5 344 59.3
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 5.7e-99 365.2 340 58.5
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 9.7e-99 364.4 301 63.5
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 1.6e-98 363.6 297 64.3
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 3.7e-98 362.5 322 60.6
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 8.2e-98 361.3 322 61.2
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 1.1e-97 360.9 340 57.4
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 1.4e-97 360.5 322 59.9
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 1.4e-97 360.5 350 57.4
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 6.9e-97 358.2 339 58.1
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 6.9e-97 358.2 334 60.2
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 1.2e-96 357.5 300 62.7
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 4.5e-96 355.5 346 56.9
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 5.9e-96 355.1 340 56.8
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 7.6e-96 354.8 343 58.6
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 1.0e-95 354.4 342 57.0
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 1.0e-95 354.4 338 58.0
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 2.2e-95 353.2 345 58.3
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 2.2e-95 353.2 347 57.1
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 3.8e-95 352.4 348 56.6
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 1.9e-94 350.1 295 63.1
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 4.2e-94 349.0 347 57.1
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 7.2e-94 348.2 346 56.1
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 1.6e-93 347.1 349 56.2
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 2.7e-93 346.3 347 57.6
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 3.6e-93 345.9 339 54.3
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 2.3e-92 343.2 343 54.8
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 3.9e-92 342.4 344 53.5
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 1.9e-91 340.1 298 60.4
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 1.9e-91 340.1 343 54.2
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 1.9e-91 340.1 343 54.2
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 4.3e-91 339.0 343 53.4
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 7.4e-91 338.2 343 53.9
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 9.7e-91 337.8 348 55.7
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 1.3e-90 337.4 385 49.6
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 4.1e-89 332.4 336 56.2
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 5.3e-89 332.0 346 54.3
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 6.9e-89 331.6 354 52.3
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 6.9e-89 331.6 343 52.5
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 2.0e-88 330.1 329 54.1
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 4.5e-88 328.9 341 54.0
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 5.9e-88 328.6 389 48.8
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 3.2e-86 322.8 298 58.1
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 2.1e-85 320.1 341 50.4
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 6.1e-85 318.5 353 53.0
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 3.9e-84 315.8 340 50.0
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 3.3e-83 312.8 346 50.9
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 7.4e-83 311.6 320 54.7
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 2.2e-82 310.1 377 49.1
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 6.3e-82 308.5 318 55.0
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 9.1e-81 304.7 347 52.7
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 3.8e-79 299.3 288 54.2
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 7.7e-72 275.0 343 50.7
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 5.5e-62 242.3 344 47.1
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 8.0e-61 238.4 248 49.2
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 6.8e-60 235.3 343 41.4
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 1.3e-58 231.1 220 55.9
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 1.1e-54 218.0 208 56.2
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 2.5e-54 216.9 285 46.3
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 1.4e-52 211.1 299 42.1
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 1.3e-34 151.4 96 71.9
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 6.4e-34 149.1 138 60.9
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 1.0e-31 141.7 247 39.7
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 3.3e-30 136.7 309 31.7
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 4.7e-29 132.9 146 53.4
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 1.7e-26 124.4 303 29.0
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 5.4e-25 119.4 127 52.0
BcaB05g24622 Brassica carinata HOM05D007241 ORTHO05D009142 3.3e-22 110.2 120 48.3
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-19 101.3 300 25.7
COL.COLO4_14645 Corchorus olitorius HOM05D007241 ORTHO05D009142 3.8e-18 96.7 133 48.9
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 4.0e-12 76.6 149 34.2
TAR629G1375 Trochodendron aralioides HOM05D007241 ORTHO05D009142 2.9e-10 70.5 58 60.3
SMO164G0023 Selaginella moellendorffii HOM05D007241 ORTHO05D009142 2.5e-06 57.4 330 23.3


User provided reference genes

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