Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007329g0010 Nicotiana tabacum HOM05D005621 ORTHO05D007248 1.1e-116 423.3 221 100.0
Nitab4.5_0013984g0010 Nicotiana tabacum HOM05D005621 ORTHO05D007248 6.6e-109 397.5 215 96.7
Nitab4.5_0005745g0010 Nicotiana tabacum HOM05D005621 ORTHO05D007248 4.8e-107 391.3 215 95.3
Nitab4.5_0012909g0010 Nicotiana tabacum HOM05D005621 ORTHO05D007248 7.4e-100 367.5 201 94.0
Solyc02g077990.3 Solanum lycopersicum HOM05D005621 ORTHO05D007248 1.4e-90 336.7 223 82.1
PGSC0003DMG400029704 Solanum tuberosum HOM05D005621 ORTHO05D007248 1.4e-90 336.7 223 81.2
Sopen02g022830 Solanum pennellii HOM05D005621 ORTHO05D007248 2.4e-90 335.9 223 82.1
Peaxi162Scf02261g00011 Petunia axillaris HOM05D005621 ORTHO05D007248 1.9e-87 326.2 223 79.8
CAN.G529.17 Capsicum annuum HOM05D005621 ORTHO05D007248 1.3e-83 313.5 224 77.2
Lsat_1_v5_gn_7_21701 Lactuca sativa HOM05D005621 ORTHO05D007248 2.0e-76 289.7 217 71.4
Oeu029361.1 Olea europaea HOM05D005621 ORTHO05D007248 2.0e-76 289.7 221 71.9
Cc02_g13570 Coffea canephora HOM05D005621 ORTHO05D007248 6.3e-75 284.6 228 67.1
HanXRQChr09g0253381 Helianthus annuus HOM05D005621 ORTHO05D007248 1.8e-74 283.1 211 69.2
Dinv40577 Davidia involucrata HOM05D005621 ORTHO05D007248 5.9e-73 278.1 232 68.1
Migut.H01481 Erythranthe guttata HOM05D005621 ORTHO05D007248 1.1e-71 273.9 224 66.5
Hma1.2p1_0208F.1_g088250 Hydrangea macrophylla HOM05D005621 ORTHO05D007248 1.2e-70 270.4 234 65.8
MSTRG.14706 Avicennia marina HOM05D005621 ORTHO05D007248 1.0e-69 267.3 226 67.7
Haze_06422 Corylus avellana HOM05D005621 ORTHO05D007248 1.4e-69 266.9 230 66.5
Cfa000493 Carpinus fangiana HOM05D005621 ORTHO05D007248 1.8e-69 266.5 230 66.5
QL05p041319 Quercus lobata HOM05D005621 ORTHO05D007248 3.9e-69 265.4 229 64.2
ClCG01G023060 Citrullus lanatus HOM05D005621 ORTHO05D007248 2.0e-68 263.1 223 66.8
MELO3C007277.2 Cucumis melo HOM05D005621 ORTHO05D007248 2.0e-68 263.1 228 64.9
Cpa.g.sc464.3 Carica papaya HOM05D005621 ORTHO05D007248 2.6e-68 262.7 227 65.2
Gorai.010G256400 Gossypium raimondii HOM05D005621 ORTHO05D007248 3.3e-68 262.3 224 64.7
MD10G1292500 Malus domestica HOM05D005621 ORTHO05D007248 3.3e-68 262.3 225 66.2
Prupe.4G049400 Prunus persica HOM05D005621 ORTHO05D007248 3.3e-68 262.3 228 65.4
CsaV3_6G050190 Cucumis sativus L. HOM05D005621 ORTHO05D007248 4.4e-68 261.9 224 65.2
Manes.16G029300 Manihot esculenta HOM05D005621 ORTHO05D007248 5.7e-68 261.5 218 65.6
DCAR_004062 Daucus carota HOM05D005621 ORTHO05D007248 7.4e-68 261.2 228 65.8
MD00G1115700 Malus domestica HOM05D005621 ORTHO05D007248 7.4e-68 261.2 225 65.8
Nn1g06478 Nelumbo nucifera HOM05D005621 ORTHO05D007248 7.4e-68 261.2 237 63.7
Dinv17326 Davidia involucrata HOM05D005621 ORTHO05D007248 1.3e-67 260.4 230 66.5
Thecc.06G184600 Theobroma cacao HOM05D005621 ORTHO05D007248 1.3e-67 260.4 200 69.5
TAR624G0986 Trochodendron aralioides HOM05D005621 ORTHO05D007248 1.3e-67 260.4 236 63.6
COL.COLO4_31445 Corchorus olitorius HOM05D005621 ORTHO05D007248 3.7e-67 258.8 169 75.7
FvH4_3g08970 Fragaria vesca HOM05D005621 ORTHO05D007248 3.7e-67 258.8 228 65.8
CDE02G0355 Ceratophyllum demersum HOM05D005621 ORTHO05D007248 8.2e-67 257.7 222 62.6
CiPaw.09G061400 Carya illinoinensis HOM05D005621 ORTHO05D007248 1.1e-66 257.3 226 63.3
FAN16G3294 Fragaria x ananassa HOM05D005621 ORTHO05D007248 1.1e-66 257.3 227 65.2
SalBow7G0434 Salvia bowleyana HOM05D005621 ORTHO05D007248 1.1e-66 257.3 226 65.9
SalBow7G3926 Salvia bowleyana HOM05D005621 ORTHO05D007248 1.1e-66 257.3 226 65.9
TWI63G1165 Tripterygium wilfordii HOM05D005621 ORTHO05D007248 1.1e-66 257.3 217 65.4
Gohir.A06G211100 Gossypium hirsutum HOM05D005621 ORTHO05D007248 1.4e-66 256.9 224 63.8
Potri.004G045700 Populus trichocarpa HOM05D005621 ORTHO05D007248 1.4e-66 256.9 223 63.7
FAN21G0060 Fragaria x ananassa HOM05D005621 ORTHO05D007248 1.8e-66 256.5 229 64.6
PSO541G5241 Papaver somniferum HOM05D005621 ORTHO05D007248 1.8e-66 256.5 231 64.5
PSO675G9131 Papaver somniferum HOM05D005621 ORTHO05D007248 1.8e-66 256.5 231 64.5
Eucgr.D00609 Eucalyptus grandis HOM05D005621 ORTHO05D007248 2.4e-66 256.1 164 78.0
Sed0019345 Sechium edule HOM05D005621 ORTHO05D007248 2.4e-66 256.1 222 64.0
Glyma.07G198500 Glycine max HOM05D005621 ORTHO05D007248 3.1e-66 255.8 220 64.5
ECA236G3692 Erigeron canadensis HOM05D005621 ORTHO05D007248 4.1e-66 255.4 216 66.2
FAN11G2270 Fragaria x ananassa HOM05D005621 ORTHO05D007248 5.3e-66 255.0 226 65.5
FAN25G0915 Fragaria x ananassa HOM05D005621 ORTHO05D007248 2.0e-65 253.1 170 75.9
CDE05G0202 Ceratophyllum demersum HOM05D005621 ORTHO05D007248 2.6e-65 252.7 222 61.7
Gohir.D05G163500 Gossypium hirsutum HOM05D005621 ORTHO05D007248 3.5e-65 252.3 225 63.6
Lalb_Chr16g0383871 Lupinus albus HOM05D005621 ORTHO05D007248 3.5e-65 252.3 224 65.2
Gohir.A05G160800 Gossypium hirsutum HOM05D005621 ORTHO05D007248 4.5e-65 251.9 225 63.1
Glyma.13G177900 Glycine max HOM05D005621 ORTHO05D007248 5.9e-65 251.5 221 64.7
GSVIVG01021083001 Vitis vinifera HOM05D005621 ORTHO05D007248 7.7e-65 251.1 227 63.4
Sabra04G0028500 Salix brachista HOM05D005621 ORTHO05D007248 1.3e-64 250.4 223 64.6
AUR62017033 Chenopodium quinoa HOM05D005621 ORTHO05D007248 1.7e-64 250.0 204 67.6
Gorai.009G168600 Gossypium raimondii HOM05D005621 ORTHO05D007248 1.7e-64 250.0 225 63.1
AUR62014837 Chenopodium quinoa HOM05D005621 ORTHO05D007248 6.5e-64 248.1 223 63.7
Gohir.D06G210100 Gossypium hirsutum HOM05D005621 ORTHO05D007248 8.5e-64 247.7 222 62.2
PGR004G2009 Punica granatum HOM05D005621 ORTHO05D007248 4.2e-63 245.4 246 63.0
SGA_v2.0_scaffold109G31092 Striga asiatica HOM05D005621 ORTHO05D007248 7.2e-63 244.6 227 61.2
Ah.09g237450 Amaranthus hybridus HOM05D005621 ORTHO05D007248 9.4e-63 244.2 222 62.2
THA.LOC104814219 Tarenaya hassleriana HOM05D005621 ORTHO05D007248 9.4e-63 244.2 222 65.3
Lalb_Chr09g0327691 Lupinus albus HOM05D005621 ORTHO05D007248 1.2e-62 243.8 218 63.3
CANSAT35G1861 Cannabis sativa HOM05D005621 ORTHO05D007248 2.1e-62 243.0 226 62.8
Lj4g0015429 Lotus japonicus HOM05D005621 ORTHO05D007248 2.7e-62 242.7 228 62.7
Atru.chr10.1848 Acer truncatum HOM05D005621 ORTHO05D007248 1.4e-61 240.4 168 75.6
Ah.14g089540 Amaranthus hybridus HOM05D005621 ORTHO05D007248 1.8e-61 240.0 227 61.2
Ciclev10016057m.g Citrus clementina HOM05D005621 ORTHO05D007248 2.3e-61 239.6 215 64.2
Lj2A290T34 Lonicera japonica HOM05D005621 ORTHO05D007248 5.2e-61 238.4 163 74.2
MBI18_g13183_MAGBIO Magnolia biondii HOM05D005621 ORTHO05D007248 1.5e-60 236.9 181 68.0
Phvul.002G229700 Phaseolus vulgaris HOM05D005621 ORTHO05D007248 2.0e-60 236.5 224 61.6
Sc05g0007560 Simmondsia chinensis HOM05D005621 ORTHO05D007248 3.3e-60 235.7 208 62.0
VMungo0251G0522 Vigna mungo HOM05D005621 ORTHO05D007248 3.3e-60 235.7 224 61.2
EL10Ac8g20402 Beta vulgaris HOM05D005621 ORTHO05D007248 7.5e-60 234.6 218 60.6
Potri.011G053900 Populus trichocarpa HOM05D005621 ORTHO05D007248 2.8e-59 232.6 218 61.9
ATR0217G013 Amborella trichopoda HOM05D005621 ORTHO05D007248 3.7e-59 232.3 178 65.7
Ca_18557_v3 Cicer arietinum L. HOM05D005621 ORTHO05D007248 1.4e-58 230.3 226 59.7
Aa31sc652G50 Aethionema arabicum HOM05D005621 ORTHO05D007248 3.1e-58 229.2 217 61.3
Aa31sc652G80 Aethionema arabicum HOM05D005621 ORTHO05D007248 3.1e-58 229.2 217 61.3
TPR.G16335 Trifolium pratense HOM05D005621 ORTHO05D007248 4.1e-58 228.8 219 60.7
Aqoxy1G02371 Aquilegia oxysepala HOM05D005621 ORTHO05D007248 5.3e-58 228.4 232 58.6
RcHm_v2.0_Chr5g0008741 Rosa chinensis HOM05D005621 ORTHO05D007248 7.0e-58 228.0 226 59.3
AL4G29560 Arabidopsis lyrata HOM05D005621 ORTHO05D007248 1.6e-57 226.9 225 61.8
Hund21218 Selenicereus undatus HOM05D005621 ORTHO05D007248 1.6e-57 226.9 207 59.4
Carub.0004s1547 Capsella rubella HOM05D005621 ORTHO05D007248 2.0e-57 226.5 223 60.5
AT2G33800 Arabidopsis thaliana HOM05D005621 ORTHO05D007248 3.5e-57 225.7 224 61.2
unitig_0.g964 Utricularia gibba HOM05D005621 ORTHO05D007248 5.9e-57 224.9 216 58.8
Duzib235G0013 Durio zibethinus HOM05D005621 ORTHO05D007248 7.7e-57 224.6 217 59.9
Sp4g16190 Schrenkiella parvula HOM05D005621 ORTHO05D007248 2.2e-56 223.0 221 61.5
Medtr4g088615 Medicago truncatula HOM05D005621 ORTHO05D007248 3.8e-56 222.2 222 60.8
BraA04t18105Z Brassica rapa HOM05D005621 ORTHO05D007248 5.5e-55 218.4 220 60.5
CARHR127910 Cardamine hirsuta HOM05D005621 ORTHO05D007248 1.2e-54 217.2 224 60.3
C04p63370 Brassica napus HOM05D005621 ORTHO05D007248 6.1e-54 214.9 220 60.0
BolC4t27812H Brassica oleracea HOM05D005621 ORTHO05D007248 8.0e-54 214.5 220 59.5
A04p26030 Brassica napus HOM05D005621 ORTHO05D007248 1.8e-53 213.4 220 60.5
Psat7g115360 Pisum sativum HOM05D005621 ORTHO05D007248 2.6e-52 209.5 230 53.5
Actinidia16560 Actinidia chinensis HOM05D005621 ORTHO05D007248 1.8e-45 186.8 240 51.2
Rhsim02G0132300 Rhododendron simsii HOM05D005621 ORTHO05D007248 2.4e-42 176.4 245 48.2
vmacro15918 Vaccinium macrocarpon HOM05D005621 ORTHO05D007248 1.0e-40 171.0 269 44.2
Os03g0452300 Oryza sativa ssp. japonica HOM05D005621 ORTHO05D007248 2.5e-39 166.4 155 56.8
FvH4_2g34180 Fragaria vesca HOM05D005621 ORTHO05D007248 4.4e-36 155.6 98 82.7
FAN24G2187 Fragaria x ananassa HOM05D005621 ORTHO05D007248 4.4e-36 155.6 98 82.7
BcaC02g07768 Brassica carinata HOM05D005621 ORTHO05D007248 4.6e-33 145.6 107 72.9
Zm00001eb043240 Zea mays HOM05D005621 ORTHO05D007248 3.0e-32 142.9 210 41.9
Pp3c7_18380 Physcomitrium patens HOM05D005621 ORTHO05D007248 8.6e-32 141.4 134 56.7
Pp3c11_10680 Physcomitrium patens HOM05D005621 ORTHO05D007248 5.6e-31 138.7 124 57.3
SEGI_11788 Sequoiadendron giganteum HOM05D005621 ORTHO05D007248 5.6e-31 138.7 127 56.7
Pp3c1_5050 Physcomitrium patens HOM05D005621 ORTHO05D007248 7.3e-31 138.3 148 54.1
CBR_g50385 Chara braunii HOM05D005621 ORTHO05D007248 4.7e-30 135.6 140 54.3
Cc02_g13560 Coffea canephora HOM05D005621 ORTHO05D007248 6.2e-30 135.2 121 59.5
Mapoly0008s0189 Marchantia polymorpha HOM05D005621 ORTHO05D007248 1.2e-28 131.0 146 52.1
AagrBONN_evm.TU.Sc2ySwM_344.1949 Anthoceros agrestis HOM05D005621 ORTHO05D007248 4.9e-27 125.6 142 52.1
AL4G11520 Arabidopsis lyrata HOM05D005621 ORTHO05D007248 4.6e-25 119.0 75 80.0
HPP92_014187 Vanilla planifolia HOM05D005621 ORTHO05D007248 8.9e-21 104.8 147 43.5
VMungo0647G2378 Vigna mungo HOM05D005621 ORTHO05D007248 2.4e-18 96.7 99 51.5
PRCOL_00000384 Prasinoderma coloniale HOM05D005621 ORTHO05D007248 6.0e-17 92.0 89 50.6
MCO06G207 Micromonas commoda HOM05D005621 ORTHO05D007248 2.1e-14 83.6 78 53.8
Cfa000499 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.8e-14 83.2 158 41.8
Cre16.g659950 Chlamydomonas reinhardtii HOM05D005621 ORTHO05D007248 4.1e-10 69.3 78 39.7


User provided reference genes

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