Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 2652.5 1337 100.0
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 2460.6 1328 93.9
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 2371.3 1339 89.0
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 2370.1 1338 89.3
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 2355.9 1338 88.5
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 2333.5 1338 87.8
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 2238.4 1262 89.1
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1842.0 1349 69.2
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1811.2 1349 68.1
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1778.8 1346 67.2
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1761.9 1337 67.4
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1748.0 1352 67.1
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1746.1 1353 66.0
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1745.7 1345 66.2
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1730.7 1349 64.9
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1727.6 1351 65.5
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1723.4 1345 65.5
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1719.1 1348 64.8
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1707.6 1351 65.4
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1697.9 1346 64.3
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1696.8 1349 64.4
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1695.6 1346 64.4
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1686.8 1295 66.9
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1683.7 1269 68.1
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1682.9 1351 64.8
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1682.2 1349 64.4
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1675.2 1345 63.3
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1669.8 1349 64.0
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1662.9 1341 63.7
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1657.5 1346 62.0
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1655.6 1351 62.9
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1654.8 1351 62.9
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1654.8 1350 63.0
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1654.4 1345 62.7
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1653.6 1351 62.8
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1648.3 1360 62.3
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1645.2 1348 61.9
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1644.0 1351 62.5
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1638.2 1351 62.1
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1634.8 1349 62.4
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1634.4 1351 61.4
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1633.6 1348 62.5
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1632.1 1355 63.1
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1623.6 1348 61.6
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1623.2 1348 61.6
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1621.7 1352 61.0
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1619.8 1267 65.7
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1611.3 1344 61.6
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1610.5 1350 61.9
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1607.8 1356 61.0
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1605.1 1365 61.3
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1601.6 1347 61.8
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1600.9 1269 63.8
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1598.6 1350 60.9
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1597.8 1349 61.5
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1595.1 1353 60.4
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1588.5 1352 61.1
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1588.2 1344 60.5
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1578.5 1347 60.6
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1578.5 1350 59.9
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1577.8 1355 60.6
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1577.4 1352 59.5
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1574.7 1353 60.5
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1573.1 1347 60.8
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1568.1 1276 62.6
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1565.4 1301 61.7
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1564.7 1351 60.0
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1546.6 1340 60.5
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1535.0 1346 60.4
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1529.2 1306 62.9
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1528.8 1345 59.2
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1508.4 1094 70.3
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1491.9 1351 57.7
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1489.9 1353 57.5
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1488.0 1353 57.4
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1487.6 1350 57.0
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1485.3 1352 57.3
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1485.3 1354 57.5
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1483.0 1215 62.1
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1481.1 1559 52.9
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1480.7 1349 57.2
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1477.2 1101 67.8
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1474.9 1356 57.2
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1467.2 1352 56.9
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1447.2 1379 55.0
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1425.6 1373 54.0
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1423.3 1132 63.4
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1406.3 1348 55.5
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1397.9 1108 63.4
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1380.5 1358 52.4
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1377.8 1093 63.5
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1346.3 1152 60.2
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1325.8 1360 52.8
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1321.2 1340 52.9
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1311.2 1344 54.1
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1211.4 839 72.8
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1166.4 1358 49.6
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1155.6 967 60.8
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1120.1 754 74.9
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1100.9 1274 48.0
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 0.0e+00 1076.6 927 60.2
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 1.9e-251 873.6 1400 38.1
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 8.3e-247 858.2 874 51.0
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 3.5e-229 799.7 1179 40.5
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 4.7e-226 789.3 1159 40.8
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 8.1e-226 788.5 1342 37.0
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 1.9e-211 740.7 802 50.5
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 4.5e-168 596.7 1529 30.1
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 1.0e-140 505.8 459 59.3
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 1.5e-139 501.9 354 70.9
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 1.9e-121 441.8 401 55.1
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 4.2e-89 334.3 336 55.7
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 6.0e-88 330.5 1480 25.8
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 3.1e-76 291.6 252 56.3
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 7.7e-75 287.0 1539 24.6
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 5.0e-74 284.3 196 76.5
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 2.8e-61 241.9 1353 23.9
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 7.0e-60 237.3 304 45.7
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 5.9e-59 234.2 167 74.9
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 2.7e-48 198.7 1371 24.7
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 2.7e-43 182.2 138 70.3
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 3.2e-41 175.3 236 43.2
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 9.4e-41 173.7 130 70.8
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 1.7e-37 162.9 257 39.7
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 2.0e-35 156.0 289 40.5
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 1.2e-32 146.7 134 57.5


User provided reference genes

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