Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006333g0050 Nicotiana tabacum HOM05D000568 ORTHO05D000628 5.6e-87 324.3 174 100.0
Nitab4.5_0001308g0180 Nicotiana tabacum HOM05D000568 ORTHO05D000628 4.8e-30 135.2 211 52.1
GSVIVG01019119001 Vitis vinifera HOM05D000568 ORTHO05D000628 9.5e-26 120.9 174 50.0
Nn1g09782 Nelumbo nucifera HOM05D000568 ORTHO05D000628 2.8e-25 119.4 187 50.3
QL01p048758 Quercus lobata HOM05D000568 ORTHO05D000628 6.1e-25 118.2 192 47.9
FAN09G0846 Fragaria x ananassa HOM05D000568 ORTHO05D000628 2.3e-24 116.3 187 49.2
FAN14G5758 Fragaria x ananassa HOM05D000568 ORTHO05D000628 2.3e-24 116.3 187 49.2
FAN02G1199 Fragaria x ananassa HOM05D000568 ORTHO05D000628 6.8e-24 114.8 187 48.7
Cfa006270 Carpinus fangiana HOM05D000568 ORTHO05D000628 8.9e-24 114.4 187 48.1
FAN05G2012 Fragaria x ananassa HOM05D000568 ORTHO05D000628 5.7e-23 111.7 185 48.1
Lj8A196T47 Lonicera japonica HOM05D000568 ORTHO05D000628 5.7e-23 111.7 190 50.5
Sabra19G0062700 Salix brachista HOM05D000568 ORTHO05D000628 1.7e-22 110.2 206 36.4
Nn1g09792 Nelumbo nucifera HOM05D000568 ORTHO05D000628 3.7e-22 109.0 189 49.2
ClCG03G010840 Citrullus lanatus HOM05D000568 ORTHO05D000628 4.1e-21 105.5 78 79.5
arahy.Tifrunner.gnm1.ann1.MSPK9F Arachis hypogaea HOM05D000568 ORTHO05D000628 1.2e-20 104.0 187 46.5
arahy.Tifrunner.gnm1.ann1.ZG36KZ Arachis hypogaea HOM05D000568 ORTHO05D000628 1.2e-20 104.0 187 46.5
Nitab4.5_0002233g0030 Nicotiana tabacum HOM05D000568 ORTHO05D000628 3.8e-19 99.0 232 43.1
vmacro10408 Vaccinium macrocarpon HOM05D000568 ORTHO05D000628 2.8e-17 92.8 243 32.9
EL10Ac4g09976 Beta vulgaris HOM05D000568 ORTHO05D000628 1.8e-16 90.1 183 45.4
Ca_07974_v3 Cicer arietinum L. HOM05D000568 ORTHO05D000628 2.6e-15 86.3 205 40.0
Zm00001eb364730 Zea mays HOM05D000568 ORTHO05D000628 5.8e-15 85.1 189 43.9
Nitab4.5_0001653g0090 Nicotiana tabacum HOM05D000568 ORTHO05D000628 7.5e-15 84.7 232 38.8
Nitab4.5_0011656g0010 Nicotiana tabacum HOM05D000568 ORTHO05D000628 9.8e-15 84.3 232 36.6
Oeu040497.1 Olea europaea HOM05D000568 ORTHO05D000628 9.8e-15 84.3 222 31.1
Atru.chr12.1796 Acer truncatum HOM05D000568 ORTHO05D000628 1.1e-13 80.9 232 36.6
Ah.06g195520 Amaranthus hybridus HOM05D000568 ORTHO05D000628 1.4e-13 80.5 187 43.3
PGSC0003DMG400016236 Solanum tuberosum HOM05D000568 ORTHO05D000628 1.8e-13 80.1 224 37.9
MD12G1259900 Malus domestica HOM05D000568 ORTHO05D000628 2.4e-13 79.7 232 37.9
Prupe.6G360600 Prunus persica HOM05D000568 ORTHO05D000628 7.0e-13 78.2 232 37.1
Pp3c26_12270 Physcomitrium patens HOM05D000568 ORTHO05D000628 3.5e-12 75.9 43 74.4
CAN.G1177.12 Capsicum annuum HOM05D000568 ORTHO05D000628 7.8e-12 74.7 224 36.6
COL.COLO4_27387 Corchorus olitorius HOM05D000568 ORTHO05D000628 7.8e-12 74.7 131 45.0
Dinv06978 Davidia involucrata HOM05D000568 ORTHO05D000628 7.8e-12 74.7 234 36.8
Solyc11g008900.2 Solanum lycopersicum HOM05D000568 ORTHO05D000628 7.8e-12 74.7 224 36.6
Sopen11g004680 Solanum pennellii HOM05D000568 ORTHO05D000628 7.8e-12 74.7 224 36.6
Potri.013G086800 Populus trichocarpa HOM05D000568 ORTHO05D000628 1.0e-11 74.3 238 34.9
CSS0035731 Camellia sinensis var. sinensis HOM05D000568 ORTHO05D000628 1.3e-11 73.9 236 37.3
MD03G1280400 Malus domestica HOM05D000568 ORTHO05D000628 1.3e-11 73.9 44 65.9
MD04G1244100 Malus domestica HOM05D000568 ORTHO05D000628 1.3e-11 73.9 232 36.6
Peaxi162Scf00253g00721 Petunia axillaris HOM05D000568 ORTHO05D000628 1.3e-11 73.9 224 39.3
AUR62000319 Chenopodium quinoa HOM05D000568 ORTHO05D000628 2.3e-11 73.2 213 38.5
AUR62006665 Chenopodium quinoa HOM05D000568 ORTHO05D000628 2.3e-11 73.2 213 38.5
CANSAT54G1162 Cannabis sativa HOM05D000568 ORTHO05D000628 3.0e-11 72.8 232 36.6
Hma1.2p1_0123F.1_g057910 Hydrangea macrophylla HOM05D000568 ORTHO05D000628 3.0e-11 72.8 239 34.7
FvH4_6g00570 Fragaria vesca HOM05D000568 ORTHO05D000628 3.9e-11 72.4 232 35.3
Sabra13G0077100 Salix brachista HOM05D000568 ORTHO05D000628 3.9e-11 72.4 238 34.5
Cc03_g13820 Coffea canephora HOM05D000568 ORTHO05D000628 6.6e-11 71.6 48 58.3
Dinv29110 Davidia involucrata HOM05D000568 ORTHO05D000628 8.6e-11 71.2 234 36.3
RcHm_v2.0_Chr3g0447961 Rosa chinensis HOM05D000568 ORTHO05D000628 1.1e-10 70.9 232 35.8
unitig_749.g13505 Utricularia gibba HOM05D000568 ORTHO05D000628 1.1e-10 70.9 74 67.6
Pp3c26_12400 Physcomitrium patens HOM05D000568 ORTHO05D000628 1.5e-10 70.5 36 80.6
SGA_v2.0_scaffold86G26915 Striga asiatica HOM05D000568 ORTHO05D000628 1.5e-10 70.5 75 58.7
Ciclev10011741m.g Citrus clementina HOM05D000568 ORTHO05D000628 1.9e-10 70.1 232 34.9
AL39U10010 Arabidopsis lyrata HOM05D000568 ORTHO05D000628 2.5e-10 69.7 45 57.8
Gohir.D04G026000 Gossypium hirsutum HOM05D000568 ORTHO05D000628 2.5e-10 69.7 232 34.5
Manes.08G104100 Manihot esculenta HOM05D000568 ORTHO05D000628 3.3e-10 69.3 237 33.8
Nitab4.5_0006639g0130 Nicotiana tabacum HOM05D000568 ORTHO05D000628 3.3e-10 69.3 45 86.7
Ah.04g158860 Amaranthus hybridus HOM05D000568 ORTHO05D000628 4.3e-10 68.9 210 37.1
Gorai.012G028600 Gossypium raimondii HOM05D000568 ORTHO05D000628 4.3e-10 68.9 233 34.3
Oeu062901.3 Olea europaea HOM05D000568 ORTHO05D000628 7.3e-10 68.2 44 56.8
Thhalv10020900m.g Eutrema salsugineum HOM05D000568 ORTHO05D000628 9.5e-10 67.8 122 44.3
SGA_v2.0_scaffold57G20232 Striga asiatica HOM05D000568 ORTHO05D000628 9.5e-10 67.8 44 59.1
CiPaw.08G115800 Carya illinoinensis HOM05D000568 ORTHO05D000628 2.1e-09 66.6 238 34.5
Gohir.A05G391200 Gossypium hirsutum HOM05D000568 ORTHO05D000628 2.8e-09 66.2 232 34.1
MD03G1278900 Malus domestica HOM05D000568 ORTHO05D000628 3.6e-09 65.9 98 53.1
SHI16844 Sapria himalayana HOM05D000568 ORTHO05D000628 3.6e-09 65.9 48 54.2
Duzib128G0444 Durio zibethinus HOM05D000568 ORTHO05D000628 4.7e-09 65.5 238 32.8
Oeu021112.1 Olea europaea HOM05D000568 ORTHO05D000628 8.0e-09 64.7 45 55.6
CSS0012695 Camellia sinensis var. sinensis HOM05D000568 ORTHO05D000628 1.1e-08 64.3 234 35.9
HPP92_003544 Vanilla planifolia HOM05D000568 ORTHO05D000628 1.1e-08 64.3 190 40.0
Phvul.008G054800 Phaseolus vulgaris HOM05D000568 ORTHO05D000628 1.8e-08 63.5 232 33.6
Sed0003283 Sechium edule HOM05D000568 ORTHO05D000628 1.8e-08 63.5 43 58.1
Sabra14G0121200 Salix brachista HOM05D000568 ORTHO05D000628 2.3e-08 63.2 43 58.1
ECA238G1103 Erigeron canadensis HOM05D000568 ORTHO05D000628 4.0e-08 62.4 226 34.1
MBI18_g01956_MAGBIO Magnolia biondii HOM05D000568 ORTHO05D000628 4.0e-08 62.4 40 62.5
Hund21897 Selenicereus undatus HOM05D000568 ORTHO05D000628 4.0e-08 62.4 67 44.8
TAR362G0496 Trochodendron aralioides HOM05D000568 ORTHO05D000628 4.0e-08 62.4 234 35.0
VMungo1383G1432 Vigna mungo HOM05D000568 ORTHO05D000628 4.0e-08 62.4 232 33.2
Actinidia03829 Actinidia chinensis HOM05D000568 ORTHO05D000628 5.2e-08 62.0 234 33.8
MELO3C010064.2 Cucumis melo HOM05D000568 ORTHO05D000628 5.2e-08 62.0 123 43.1
CsaV3_1G044580 Cucumis sativus L. HOM05D000568 ORTHO05D000628 5.2e-08 62.0 123 43.1
FAN22G0784 Fragaria x ananassa HOM05D000568 ORTHO05D000628 6.8e-08 61.6 38 65.8
Glyma.09G251200 Glycine max HOM05D000568 ORTHO05D000628 6.8e-08 61.6 232 33.2
CiPaw.07G079600 Carya illinoinensis HOM05D000568 ORTHO05D000628 8.9e-08 61.2 231 33.8
Gohir.A08G224800 Gossypium hirsutum HOM05D000568 ORTHO05D000628 8.9e-08 61.2 232 31.9
Gorai.004G261700 Gossypium raimondii HOM05D000568 ORTHO05D000628 8.9e-08 61.2 232 31.9
Potri.019G053200 Populus trichocarpa HOM05D000568 ORTHO05D000628 1.2e-07 60.8 238 31.1
Duzib211G0431 Durio zibethinus HOM05D000568 ORTHO05D000628 1.5e-07 60.5 35 71.4
Glyma.18G241300 Glycine max HOM05D000568 ORTHO05D000628 1.5e-07 60.5 232 33.2
Gohir.D08G245200 Gossypium hirsutum HOM05D000568 ORTHO05D000628 1.5e-07 60.5 232 31.9
Lj1g0006041 Lotus japonicus HOM05D000568 ORTHO05D000628 1.5e-07 60.5 232 32.3
Manes.09G185200 Manihot esculenta HOM05D000568 ORTHO05D000628 2.0e-07 60.1 237 31.6
CBR_g9045 Chara braunii HOM05D000568 ORTHO05D000628 3.4e-07 59.3 79 38.0
HanXRQChr17g0559161 Helianthus annuus HOM05D000568 ORTHO05D000628 3.4e-07 59.3 227 34.8
Lj1A783T51 Lonicera japonica HOM05D000568 ORTHO05D000628 3.4e-07 59.3 36 63.9
vmacro12156 Vaccinium macrocarpon HOM05D000568 ORTHO05D000628 3.4e-07 59.3 45 53.3
MBI11_g07421_MAGBIO Magnolia biondii HOM05D000568 ORTHO05D000628 4.4e-07 58.9 232 32.8
SalBow6G1599 Salvia bowleyana HOM05D000568 ORTHO05D000628 4.4e-07 58.9 126 42.1
CBR_g5575 Chara braunii HOM05D000568 ORTHO05D005559 5.8e-07 58.5 63 36.5
Thecc.05G200400 Theobroma cacao HOM05D000568 ORTHO05D000628 5.8e-07 58.5 232 32.8
vmacro08112 Vaccinium macrocarpon HOM05D000568 ORTHO05D000628 9.8e-07 57.8 34 67.6
MSTRG.8215 Avicennia marina HOM05D000568 ORTHO05D000628 1.3e-06 57.4 226 33.2
BcaB04g21335 Brassica carinata HOM05D000568 ORTHO05D000628 1.3e-06 57.4 36 61.1
DCAR_005818 Daucus carota HOM05D000568 ORTHO05D000628 1.3e-06 57.4 35 60.0
Migut.F01877 Erythranthe guttata HOM05D000568 ORTHO05D000628 1.3e-06 57.4 126 42.1
vmacro19253 Vaccinium macrocarpon HOM05D000568 ORTHO05D003200 1.7e-06 57.0 47 46.8
DCAR_002800 Daucus carota HOM05D000568 ORTHO05D000628 2.9e-06 56.2 36 55.6
Eucgr.B01407 Eucalyptus grandis HOM05D000568 ORTHO05D000628 3.7e-06 55.8 229 33.2
PGR119G1524 Punica granatum HOM05D000568 ORTHO05D000628 4.9e-06 55.5 230 32.2
TPR.G30345 Trifolium pratense HOM05D000568 ORTHO05D000628 4.9e-06 55.5 232 31.9
AagrBONN_evm.TU.Sc2ySwM_344.5256 Anthoceros agrestis HOM05D000568 ORTHO05D000628 6.4e-06 55.1 38 57.9
BcaB06g25524 Brassica carinata HOM05D004211 ORTHO05D005559 6.4e-06 55.1 55 43.6
Pp3c2_24140 Physcomitrium patens HOM05D004211 ORTHO05D005559 6.4e-06 55.1 56 46.4
BcaC05g29248 Brassica carinata HOM05D004211 ORTHO05D005559 8.3e-06 54.7 55 41.8
A05p36820 Brassica napus HOM05D004211 ORTHO05D005559 8.3e-06 54.7 55 41.8
C05p55270 Brassica napus HOM05D004211 ORTHO05D005559 8.3e-06 54.7 55 41.8
BolC5t34192H Brassica oleracea HOM05D004211 ORTHO05D005559 8.3e-06 54.7 55 41.8
BraA05t22483Z Brassica rapa HOM05D004211 ORTHO05D005559 8.3e-06 54.7 55 41.8


User provided reference genes

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