Gene: Sopen11g004680

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g004680
  • Transcript Identifier Sopen11g004680.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 3168474-3176291 : positive

Gene Family Information

  • ID HOM05D000568
  • #Genes/#Species 974/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g004680.1

Descriptions

  • Description Zinc finger CCCH domain-containing protein ZFN-like - Pisum sativum (Garden pea), Encodes a zinc finger protein. | zinc finger protein 1 (ZFN1) | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type | BEST Arabidopsis thaliana protein match is: zinc finger nuclease 3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
ISO
PLAZA Integrative Orthologynucleic acid phosphodiester bond hydrolysis AT5G16540
GO:0017148
ISO
PLAZA Integrative Orthologynegative regulation of translation AT3G02830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
InterPrometal ion binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT3G02830
GO:0048027
ISO
PLAZA Integrative OrthologymRNA 5'-UTR binding AT3G02830
GO:0004518
ISO
PLAZA Integrative Orthologynuclease activity AT3G02830
GO:0010313
ISO
PLAZA Integrative Orthologyphytochrome binding AT3G02830
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G02830

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G02830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036855 Zinc finger, CCCH-type superfamily
IPR000571 Zinc finger, CCCH-type
Mapman id Description
15.5.16 RNA biosynthesis.transcriptional regulation.transcription factor (C3H-ZF)