Gene: Pp3c26_12400
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c26_12400
- Transcript Identifier Pp3c26_12400V3.1
- Gene Type Coding gene
- Location Chr26 : 7759488-7761967 : positive
Gene Family Information
- ID HOM05D000568
- #Genes/#Species 974/99
- Phylogenetic origin
- ID ORTHO05D000628
- #Genes/#Species 727/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name Pp3c26_12400V3.1
- pacid 32917123
- alias Pp1s6_324V6
- alias Phpat.026G043900
- uniprot A0A2K1ICT4
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090305 | ISO | PLAZA Integrative Orthology | nucleic acid phosphodiester bond hydrolysis | AT5G16540 |
| GO:0017148 | ISO | PLAZA Integrative Orthology | negative regulation of translation | AT3G02830 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003729 | IBA | GOA Database | mRNA binding | |
| GO:0048027 | ISO | PLAZA Integrative Orthology | mRNA 5'-UTR binding | AT3G02830 |
| GO:0004518 | ISO | PLAZA Integrative Orthology | nuclease activity | AT3G02830 |
| GO:0010313 | ISO | PLAZA Integrative Orthology | phytochrome binding | AT3G02830 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G02830 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.16 | RNA biosynthesis.transcriptional regulation.transcription factor (C3H-ZF) |