Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006274g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 0.0e+00 1135.9 565 100.0
Peaxi162Scf00153g00217 Petunia axillaris HOM05D003829 ORTHO05D004943 2.7e-303 1044.6 565 91.5
CAN.G282.43 Capsicum annuum HOM05D003829 ORTHO05D004943 9.1e-296 1019.6 593 86.2
Sopen01g003830 Solanum pennellii HOM05D003829 ORTHO05D004943 1.2e-295 1019.2 593 86.3
Solyc01g008310.4 Solanum lycopersicum HOM05D003829 ORTHO05D004943 1.4e-288 995.7 542 90.8
CSS0022273 Camellia sinensis var. sinensis HOM05D003829 ORTHO05D004943 1.9e-261 905.6 594 77.1
Cc00_g04570 Coffea canephora HOM05D003829 ORTHO05D004943 3.6e-260 901.4 594 76.3
Actinidia35063 Actinidia chinensis HOM05D003829 ORTHO05D004943 1.2e-258 896.3 594 76.1
Actinidia18960 Actinidia chinensis HOM05D003829 ORTHO05D004943 4.4e-258 894.4 594 76.1
SalBow6G2606 Salvia bowleyana HOM05D003829 ORTHO05D004943 1.7e-257 892.5 593 75.4
MSTRG.22458 Avicennia marina HOM05D003829 ORTHO05D004943 4.9e-257 891.0 594 75.4
SGA_v2.0_scaffold127G34045 Striga asiatica HOM05D003829 ORTHO05D004943 6.4e-257 890.6 594 75.1
SGA_v2.0_scaffold116G32207 Striga asiatica HOM05D003829 ORTHO05D004943 1.4e-256 889.4 594 75.4
GSVIVG01008188001 Vitis vinifera HOM05D003829 ORTHO05D004943 9.3e-248 860.1 594 73.1
THA.LOC104820955 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 4.6e-247 857.8 592 72.3
Atru.chr10.875 Acer truncatum HOM05D003829 ORTHO05D004943 6.0e-247 857.4 593 72.5
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 7.8e-247 857.1 594 72.2
Nn3g17616 Nelumbo nucifera HOM05D003829 ORTHO05D004943 7.8e-247 857.1 593 74.0
Nn6g34733 Nelumbo nucifera HOM05D003829 ORTHO05D004943 7.8e-247 857.1 591 73.6
HanXRQChr03g0078721 Helianthus annuus HOM05D003829 ORTHO05D004943 1.3e-246 856.3 595 72.8
THA.LOC104806554 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 1.5e-245 852.8 592 72.8
Gohir.D12G270700 Gossypium hirsutum HOM05D003829 ORTHO05D004943 1.9e-245 852.4 594 74.1
Lj4C813G7 Lonicera japonica HOM05D003829 ORTHO05D004943 4.3e-245 851.3 543 77.7
TAR622G1091 Trochodendron aralioides HOM05D003829 ORTHO05D004943 4.3e-245 851.3 609 72.1
Gohir.A12G270300 Gossypium hirsutum HOM05D003829 ORTHO05D004943 7.3e-245 850.5 594 73.6
PGR119G2172 Punica granatum HOM05D003829 ORTHO05D004943 7.3e-245 850.5 598 71.7
Eucgr.B02012 Eucalyptus grandis HOM05D003829 ORTHO05D004943 9.6e-245 850.1 592 71.8
Potri.018G070200 Populus trichocarpa HOM05D003829 ORTHO05D004943 1.6e-244 849.4 596 72.0
Gorai.008G291100 Gossypium raimondii HOM05D003829 ORTHO05D004943 2.8e-244 848.6 594 73.7
Ciclev10014690m.g Citrus clementina HOM05D003829 ORTHO05D004943 4.0e-243 844.7 593 71.2
Sed0025371 Sechium edule HOM05D003829 ORTHO05D004943 1.2e-242 843.2 594 72.2
HanXRQChr09g0270121 Helianthus annuus HOM05D003829 ORTHO05D004943 1.5e-242 842.8 596 72.1
Thecc.03G060100 Theobroma cacao HOM05D003829 ORTHO05D004943 4.9e-241 837.8 594 72.9
Glyma.05G016400 Glycine max HOM05D003829 ORTHO05D004943 1.1e-240 836.6 604 70.2
Potri.013G068100 Populus trichocarpa HOM05D003829 ORTHO05D004943 1.1e-240 836.6 597 70.0
Psat4g043920 Pisum sativum HOM05D003829 ORTHO05D004943 4.2e-240 834.7 604 69.7
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea HOM05D003829 ORTHO05D004943 5.4e-240 834.3 605 69.6
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea HOM05D003829 ORTHO05D004943 9.3e-240 833.6 605 69.4
Lalb_Chr12g0197451 Lupinus albus HOM05D003829 ORTHO05D004943 1.2e-239 833.2 604 68.9
CsaV3_1G003150 Cucumis sativus L. HOM05D003829 ORTHO05D004943 1.6e-239 832.8 594 71.0
Sp6g28120 Schrenkiella parvula HOM05D003829 ORTHO05D004943 1.6e-239 832.8 594 69.4
VMungo1215G2863 Vigna mungo HOM05D003829 ORTHO05D004943 2.1e-239 832.4 604 69.7
Migut.N03353 Erythranthe guttata HOM05D003829 ORTHO05D004943 6.0e-239 830.9 575 73.2
ClCG06G015260 Citrullus lanatus HOM05D003829 ORTHO05D004943 7.9e-239 830.5 594 71.2
Medtr4g112680 Medicago truncatula HOM05D003829 ORTHO05D004943 7.9e-239 830.5 604 70.0
Prupe.5G041000 Prunus persica HOM05D003829 ORTHO05D004943 5.1e-238 827.8 594 69.5
Migut.M00517 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.1e-237 826.6 594 71.2
Manes.06G055300 Manihot esculenta HOM05D003829 ORTHO05D004943 1.5e-237 826.2 595 70.4
AL2G32240 Arabidopsis lyrata HOM05D003829 ORTHO05D004943 1.9e-237 825.9 593 68.5
DCAR_011621 Daucus carota HOM05D003829 ORTHO05D004943 1.9e-237 825.9 595 70.3
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 3.3e-237 825.1 595 71.3
Glyma.17G083700 Glycine max HOM05D003829 ORTHO05D004943 4.3e-237 824.7 604 68.9
Phvul.003G180700 Phaseolus vulgaris HOM05D003829 ORTHO05D004943 4.3e-237 824.7 604 68.9
Migut.O00831 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.6e-236 822.8 594 71.0
Carub.0002s1941 Capsella rubella HOM05D003829 ORTHO05D004943 2.8e-236 822.0 593 68.0
Prupe.5G212200 Prunus persica HOM05D003829 ORTHO05D004943 8.1e-236 820.5 594 69.9
Lj4g0017423 Lotus japonicus HOM05D003829 ORTHO05D004943 1.8e-235 819.3 604 68.7
Hund27361 Selenicereus undatus HOM05D003829 ORTHO05D004943 1.8e-235 819.3 616 68.8
MD06G1208000 Malus domestica HOM05D003829 ORTHO05D004943 4.0e-235 818.1 602 69.4
RcHm_v2.0_Chr7g0184111 Rosa chinensis HOM05D003829 ORTHO05D004943 5.3e-235 817.8 611 68.1
TWI73G0611 Tripterygium wilfordii HOM05D003829 ORTHO05D004943 1.2e-234 816.6 596 69.0
C09p61050 Brassica napus HOM05D003829 ORTHO05D004943 1.5e-234 816.2 594 68.7
unitig_0.g846 Utricularia gibba HOM05D003829 ORTHO05D004943 2.0e-234 815.8 592 68.6
EL10Ac6g14132 Beta vulgaris HOM05D003829 ORTHO05D004943 3.4e-234 815.1 621 67.3
ATR0789G018 Amborella trichopoda HOM05D003829 ORTHO05D004943 5.8e-234 814.3 598 69.1
A10p23060 Brassica napus HOM05D003829 ORTHO05D004943 9.9e-234 813.5 594 68.4
BraA10t44375Z Brassica rapa HOM05D003829 ORTHO05D004943 9.9e-234 813.5 594 68.4
BolC9t58950H Brassica oleracea HOM05D003829 ORTHO05D004943 2.2e-233 812.4 594 68.4
unitig_60.g25860 Utricularia gibba HOM05D003829 ORTHO05D004943 2.9e-233 812.0 606 67.3
QL10p021913 Quercus lobata HOM05D003829 ORTHO05D004943 8.4e-233 810.4 604 68.5
FvH4_5g13020 Fragaria vesca HOM05D003829 ORTHO05D004943 1.4e-232 809.7 607 67.4
Dinv38617 Davidia involucrata HOM05D003829 ORTHO05D004943 4.2e-232 808.1 543 74.4
AT1G72550 Arabidopsis thaliana HOM05D003829 ORTHO05D004943 9.3e-232 807.0 600 66.8
FAN13G0156 Fragaria x ananassa HOM05D003829 ORTHO05D004943 9.3e-232 807.0 607 67.2
FAN08G2534 Fragaria x ananassa HOM05D003829 ORTHO05D004943 1.2e-231 806.6 607 67.2
CDE10G0816 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 2.7e-231 805.4 587 69.7
FAN18G1085 Fragaria x ananassa HOM05D003829 ORTHO05D004943 2.7e-231 805.4 607 67.1
Ah.03g138770 Amaranthus hybridus HOM05D003829 ORTHO05D004943 4.6e-231 804.7 573 70.5
MD14G1218400 Malus domestica HOM05D003829 ORTHO05D004943 5.1e-230 801.2 600 68.2
vmacro21052 Vaccinium macrocarpon HOM05D003829 ORTHO05D004943 8.7e-230 800.4 731 60.1
CiPaw.04G139300 Carya illinoinensis HOM05D003829 ORTHO05D004943 2.1e-228 795.8 605 67.1
Duzib084G0834 Durio zibethinus HOM05D003829 ORTHO05D004943 3.7e-228 795.0 566 72.1
CARHR065490 Cardamine hirsuta HOM05D003829 ORTHO05D004943 1.4e-227 793.1 605 66.3
AUR62008644 Chenopodium quinoa HOM05D003829 ORTHO05D004943 5.8e-226 787.7 604 67.1
AUR62014243 Chenopodium quinoa HOM05D003829 ORTHO05D004943 1.3e-225 786.6 604 66.7
Sabra13G0059400 Salix brachista HOM05D003829 ORTHO05D004943 1.3e-225 786.6 673 62.0
Aa31LG11G13610 Aethionema arabicum HOM05D003829 ORTHO05D004943 2.3e-222 775.8 631 64.0
Thhalv10007156m.g Eutrema salsugineum HOM05D003829 ORTHO05D004943 8.7e-222 773.9 593 64.9
COL.COLO4_28877 Corchorus olitorius HOM05D003829 ORTHO05D004943 1.9e-221 772.7 626 66.1
Cpa.g.sc271.5 Carica papaya HOM05D003829 ORTHO05D004943 2.1e-220 769.2 593 67.8
Sc12g0007010 Simmondsia chinensis HOM05D003829 ORTHO05D004943 1.4e-219 766.5 594 66.5
MELO3C017266.2 Cucumis melo HOM05D003829 ORTHO05D004943 8.5e-217 757.3 518 73.2
Ca_21737_v3 Cicer arietinum L. HOM05D003829 ORTHO05D004943 1.9e-216 756.1 523 72.3
Os05g0558900 Oryza sativa ssp. japonica HOM05D003829 ORTHO05D004943 1.2e-215 753.4 598 65.7
PSO676G0009 Papaver somniferum HOM05D003829 ORTHO05D004943 1.9e-213 746.1 606 63.9
Cfa021591 Carpinus fangiana HOM05D003829 ORTHO05D004943 1.3e-212 743.4 553 69.8
PSO384G2719 Papaver somniferum HOM05D003829 ORTHO05D004943 2.2e-212 742.7 604 64.1
Mapoly0013s0023 Marchantia polymorpha HOM05D003829 ORTHO05D004943 4.8e-212 741.5 598 65.2
BcaC04g18917 Brassica carinata HOM05D003829 ORTHO05D004943 1.8e-211 739.6 594 63.8
Pp3c22_15340 Physcomitrium patens HOM05D003829 ORTHO05D004943 9.0e-211 737.3 602 63.1
CANSAT80G2907 Cannabis sativa HOM05D003829 ORTHO05D004943 5.0e-209 731.5 524 70.8
Oeu037756.2 Olea europaea HOM05D003829 ORTHO05D004943 1.4e-206 723.4 487 74.3
Aqoxy1G02793 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 2.4e-203 712.6 595 62.5
SMO351G0192 Selaginella moellendorffii HOM05D003829 ORTHO05D004943 4.1e-203 711.8 591 60.9
Pp3c19_13120 Physcomitrium patens HOM05D003829 ORTHO05D004943 5.3e-203 711.4 604 61.8
TPR.G23867 Trifolium pratense HOM05D003829 ORTHO05D004943 8.5e-201 704.1 534 68.0
Zm00001eb267900 Zea mays HOM05D003829 ORTHO05D004943 8.5e-201 704.1 598 62.7
CDE10G0520 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 4.2e-200 701.8 527 67.9
Lsat_1_v5_gn_1_11920 Lactuca sativa HOM05D003829 ORTHO05D004943 2.7e-199 699.1 549 66.1
Aqoxy6G02137 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 6.1e-199 698.0 595 61.5
CiPaw.15G121900 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.5e-192 676.8 524 66.6
CBR_g49053 Chara braunii HOM05D003829 ORTHO05D004943 2.3e-190 669.5 593 59.5
COL.COLO4_30269 Corchorus olitorius HOM05D003829 ORTHO05D004943 1.2e-189 667.2 758 52.4
AagrBONN_evm.TU.Sc2ySwM_199.43 Anthoceros agrestis HOM05D003829 ORTHO05D004943 1.5e-189 666.8 516 65.7
BcaB08g36877 Brassica carinata HOM05D003829 ORTHO05D004943 3.3e-189 665.6 579 60.4
Medtr5g077610 Medicago truncatula HOM05D003829 ORTHO05D004943 3.5e-186 655.6 604 58.6
CiPaw.16G081500 Carya illinoinensis HOM05D003829 ORTHO05D004943 7.0e-179 631.3 425 74.1
Migut.L00155 Erythranthe guttata HOM05D003829 ORTHO05D004943 2.1e-175 619.8 443 70.9
Cre13.g603900 Chlamydomonas reinhardtii HOM05D003829 ORTHO05D004943 2.2e-172 609.8 536 58.6
Nitab4.5_0001328g0030 Nicotiana tabacum HOM05D003829 ORTHO05D004943 1.1e-163 580.9 564 58.3
MCO09G827 Micromonas commoda HOM05D003829 ORTHO05D004943 4.1e-163 578.9 606 52.0
PSO339G3234 Papaver somniferum HOM05D003829 ORTHO05D004943 2.0e-157 560.1 579 54.4
HPP92_013145 Vanilla planifolia HOM05D003829 ORTHO05D004943 6.8e-150 535.0 605 50.4
PRCOL_00001438 Prasinoderma coloniale HOM05D003829 ORTHO05D004943 8.9e-150 534.6 583 48.9
Atru.chr11.247 Acer truncatum HOM05D003829 ORTHO05D004943 7.8e-146 521.5 474 58.0
Rhsim01G0138800 Rhododendron simsii HOM05D003829 ORTHO05D004943 4.4e-141 505.8 792 41.9
Haze_26625 Corylus avellana HOM05D003829 ORTHO05D004943 1.6e-138 497.3 613 46.2
Rhsim09G0091000 Rhododendron simsii HOM05D003829 ORTHO05D004943 1.6e-138 497.3 407 64.4
Cfa026018 Carpinus fangiana HOM05D003829 ORTHO05D004943 2.8e-135 486.5 534 48.1
Hma1.2p1_0340F.1_g130210 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 3.6e-135 486.1 399 64.4
HPP92_013144 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.8e-127 459.9 331 69.2
Nitab4.5_0000069g0100 Nicotiana tabacum HOM05D003829 ORTHO05D004943 8.1e-127 458.4 228 99.1
Haze_18554 Corylus avellana HOM05D003829 ORTHO05D004943 8.4e-124 448.4 354 66.9
Haze_25314 Corylus avellana HOM05D003829 ORTHO05D004943 2.4e-115 420.2 318 70.1
QL10p029183 Quercus lobata HOM05D003829 ORTHO05D004943 1.8e-113 414.1 273 73.6
SEGI_10599 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.9e-107 394.0 288 69.1
AagrBONN_evm.TU.Sc2ySwM_368.2791 Anthoceros agrestis HOM05D003829 ORTHO05D004943 1.0e-105 388.3 415 50.8
HPP92_012745 Vanilla planifolia HOM05D003829 ORTHO05D004943 8.7e-105 385.2 314 63.1
SEGI_36904 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 3.9e-97 359.8 291 65.6
Nitab4.5_0023875g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 6.7e-97 359.0 176 98.9
Nitab4.5_0023629g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 3.4e-93 346.7 171 99.4
HPP92_013183 Vanilla planifolia HOM05D003829 ORTHO05D004943 5.5e-91 339.3 453 44.4
Nitab4.5_0021995g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 2.3e-89 334.0 190 88.9
HPP92_013146 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.4e-86 323.9 307 57.3
SEGI_15169 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 3.3e-80 303.5 190 76.3
SEGI_31614 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.8e-70 271.2 176 74.4
Migut.L00154 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.5e-67 261.5 153 82.4
Haze_18553 Corylus avellana HOM05D003829 ORTHO05D004943 1.2e-64 251.9 154 77.9
Haze_25313 Corylus avellana HOM05D003829 ORTHO05D004943 1.2e-64 251.9 157 76.4
HPP92_013143 Vanilla planifolia HOM05D003829 ORTHO05D004943 7.0e-62 242.7 259 51.4
Sp5g27630 Schrenkiella parvula HOM05D003829 ORTHO05D004943 4.0e-57 226.9 253 49.4
Duzib205G0197 Durio zibethinus HOM05D003829 ORTHO05D004943 6.6e-52 209.5 236 52.5
Eucgr.E02529 Eucalyptus grandis HOM05D003829 ORTHO05D004943 7.3e-51 206.1 130 78.5
Eucgr.B00970 Eucalyptus grandis HOM05D003829 ORTHO05D004943 1.7e-47 194.9 120 75.8
C02p08100 Brassica napus HOM05D003829 ORTHO05D004943 4.6e-45 186.8 202 50.0
BcaC03g18463 Brassica carinata HOM05D003829 ORTHO05D004943 1.6e-42 178.3 203 47.8
BolC2t06732H Brassica oleracea HOM05D003829 ORTHO05D004943 1.2e-40 172.2 203 47.3
Rhsim09G0090700 Rhododendron simsii HOM05D000822 ORTHO05D002021 2.3e-36 157.9 183 52.5
SEGI_27435 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 3.3e-35 154.1 142 54.2
HPP92_013186 Vanilla planifolia HOM05D003829 ORTHO05D004943 5.6e-35 153.3 184 48.9
Glyma.05G172902 Glycine max HOM05D003829 ORTHO05D004943 1.8e-33 148.3 146 55.5
SEGI_23908 Sequoiadendron giganteum HOM05D003829 ORTHO05D004052 1.2e-32 145.6 219 43.4
Oeu029991.1 Olea europaea HOM05D003829 ORTHO05D004943 3.0e-28 131.0 116 59.5
A03p07510 Brassica napus HOM05D003829 ORTHO05D004943 2.1e-26 124.8 120 54.2
BraA03t10079Z Brassica rapa HOM05D000168 ORTHO05D000811 4.7e-26 123.6 120 53.3
Glyma.10G113400 Glycine max HOM05D003829 ORTHO05D028379 8.1e-26 122.9 149 48.3
C03p08720 Brassica napus HOM05D003829 ORTHO05D004943 1.8e-25 121.7 117 53.8
BolC3t13370H Brassica oleracea HOM05D000168 ORTHO05D000811 4.0e-25 120.6 117 53.0
SEGI_39885 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 2.0e-24 118.2 120 53.3
HanXRQChr05g0129701 Helianthus annuus HOM05D003829 ORTHO05D044979 3.4e-24 117.5 85 64.7
CARHR202060 Cardamine hirsuta HOM05D003829 ORTHO05D116213 7.6e-24 116.3 66 78.8
Nitab4.5_0000138g0100 Nicotiana tabacum HOM05D003829 ORTHO05D284283 2.9e-23 114.4 163 44.8
Hma1.2p1_0340F.1_g130220 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 1.7e-20 105.1 127 45.7
TPR.G25992 Trifolium pratense HOM05D003829 ORTHO05D015515 2.3e-20 104.8 71 71.8
MELO3C029751.2 Cucumis melo HOM05D003829 ORTHO05D044979 9.9e-16 89.4 86 58.1
HPP92_012679 Vanilla planifolia HOM05D000282 ORTHO05D004791 1.7e-15 88.6 70 60.0
Lsat_1_v5_gn_3_100941 Lactuca sativa HOM05D002028 ORTHO05D022527 1.2e-13 82.4 91 49.5
Lsat_1_v5_gn_4_30320 Lactuca sativa HOM05D003829 ORTHO05D015515 4.5e-08 63.9 37 78.4
Nitab4.5_0000138g0110 Nicotiana tabacum HOM05D003829 ORTHO05D283026 4.9e-07 60.5 31 87.1
Lsat_1_v5_gn_1_100681 Lactuca sativa HOM05D003829 ORTHO05D228871 6.4e-07 60.1 34 82.4
A03p61070 Brassica napus HOM05D003829 ORTHO05D028154 8.4e-07 59.7 44 63.6
BraA03t15147Z Brassica rapa HOM05D040596 ORTHO05D028154 8.4e-07 59.7 44 63.6


User provided reference genes

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