Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005729g0060 Nicotiana tabacum HOM05D005810 ORTHO05D007279 7.2e-133 477.2 240 100.0
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 5.9e-127 457.6 239 96.2
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 4.8e-105 384.8 240 83.8
Solyc01g097600.2 Solanum lycopersicum HOM05D005810 ORTHO05D007279 2.6e-98 362.5 241 80.5
Sopen01g041230 Solanum pennellii HOM05D005810 ORTHO05D007279 7.0e-88 327.8 193 86.5
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 1.1e-75 287.3 228 66.2
Lsat_1_v5_gn_5_37760 Lactuca sativa HOM05D005810 ORTHO05D007279 1.2e-74 283.9 215 68.4
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 3.4e-74 282.3 193 69.9
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 4.4e-74 282.0 194 71.1
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 1.1e-72 277.3 213 63.4
Cc02_g31830 Coffea canephora HOM05D005810 ORTHO05D007279 1.1e-72 277.3 193 71.5
SGA_v2.0_scaffold92G28303 Striga asiatica HOM05D005810 ORTHO05D007279 1.1e-72 277.3 194 71.6
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 7.1e-72 274.6 192 70.8
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 9.2e-72 274.2 193 70.5
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 3.5e-71 272.3 201 66.2
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 3.5e-71 272.3 194 68.0
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 4.6e-71 271.9 193 69.9
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 1.0e-70 270.8 195 68.2
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 1.7e-70 270.0 194 68.0
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 3.9e-70 268.9 196 67.3
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 8.6e-70 267.7 193 67.9
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 1.9e-69 266.5 242 60.3
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 2.5e-69 266.2 201 64.7
Haze_04339 Corylus avellana HOM05D005810 ORTHO05D007279 2.5e-69 266.2 192 66.1
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 3.3e-69 265.8 192 66.1
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 7.3e-69 264.6 195 67.7
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 2.8e-68 262.7 193 66.3
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 3.6e-68 262.3 203 64.0
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 3.6e-68 262.3 192 67.7
FAN14G4259 Fragaria x ananassa HOM05D005810 ORTHO05D007279 4.7e-68 261.9 216 61.1
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 8.1e-68 261.2 195 65.6
Atru.chr2.784 Acer truncatum HOM05D005810 ORTHO05D007279 1.1e-67 260.8 196 67.3
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 5.2e-67 258.5 266 53.8
Manes.09G154600 Manihot esculenta HOM05D005810 ORTHO05D007279 8.9e-67 257.7 199 65.8
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 1.2e-66 257.3 192 66.1
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 1.5e-66 256.9 219 58.4
CiPaw.07G064800 Carya illinoinensis HOM05D005810 ORTHO05D007279 1.5e-66 256.9 193 66.3
FAN05G0700 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.5e-66 256.9 191 66.5
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 1.5e-66 256.9 224 59.4
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 2.0e-66 256.5 203 63.1
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 2.0e-66 256.5 216 60.6
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 3.4e-66 255.8 166 80.7
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 7.6e-66 254.6 192 67.7
Sc09g0003830 Simmondsia chinensis HOM05D005810 ORTHO05D007279 7.6e-66 254.6 195 65.6
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 1.7e-65 253.4 230 56.1
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 1.7e-65 253.4 199 64.3
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 2.9e-65 252.7 196 66.8
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 2.9e-65 252.7 197 64.0
CsaV3_1G045590 Cucumis sativus L. HOM05D005810 ORTHO05D007279 2.9e-65 252.7 192 65.6
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 3.8e-65 252.3 201 64.2
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 6.4e-65 251.5 191 65.4
FAN02G1150 Fragaria x ananassa HOM05D005810 ORTHO05D007279 8.4e-65 251.1 216 59.7
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 1.9e-64 250.0 217 58.5
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 5.4e-64 248.4 206 62.1
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 5.4e-64 248.4 200 61.5
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 5.4e-64 248.4 193 65.8
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 5.4e-64 248.4 193 65.8
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 9.2e-64 247.7 202 61.9
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 2.1e-63 246.5 193 65.3
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 2.7e-63 246.1 230 54.3
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 6.0e-63 245.0 230 56.1
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 1.0e-62 244.2 213 62.4
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 1.9e-61 240.0 195 62.1
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 1.9e-61 240.0 195 61.0
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 2.5e-61 239.6 193 63.2
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 3.3e-61 239.2 208 59.6
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 7.3e-61 238.0 194 61.3
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 9.6e-61 237.7 232 56.0
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 9.6e-61 237.7 232 56.0
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 9.6e-61 237.7 221 57.9
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 1.2e-60 237.3 231 56.7
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 3.6e-60 235.7 199 61.3
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 3.6e-60 235.7 199 61.3
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 3.6e-60 235.7 195 60.5
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 4.7e-60 235.3 232 55.6
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 6.2e-60 235.0 231 55.4
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 6.2e-60 235.0 195 60.5
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 2.4e-59 233.0 210 57.6
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 2.4e-59 233.0 197 62.9
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 3.1e-59 232.6 217 54.8
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 3.1e-59 232.6 210 57.6
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 3.1e-59 232.6 202 59.9
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 4.0e-59 232.3 192 61.5
Manes.08G132300 Manihot esculenta HOM05D005810 ORTHO05D007279 9.9e-58 227.6 204 57.8
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 3.8e-57 225.7 196 59.2
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 6.6e-54 214.9 194 57.2
Dinv13659 Davidia involucrata HOM05D005810 ORTHO05D007279 4.3e-53 212.2 193 58.0
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 1.1e-51 207.6 202 53.5
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 5.3e-51 205.3 200 53.5
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 3.4e-50 202.6 200 54.0
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 5.8e-50 201.8 218 49.5
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 9.9e-50 201.1 193 56.0
TPR.G21485 Trifolium pratense HOM05D005810 ORTHO05D007279 8.4e-49 198.0 168 60.1
Os05g0509300 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 7.9e-47 191.4 204 46.1
AagrBONN_evm.TU.Sc2ySwM_362.2883 Anthoceros agrestis HOM05D005810 ORTHO05D007279 4.5e-42 175.6 232 43.5
Os01g0773000 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 3.2e-40 169.5 206 43.7
Zm00001eb352870 Zea mays HOM05D005810 ORTHO05D007279 9.3e-40 167.9 203 42.9
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 1.8e-38 163.7 213 44.6
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 3.9e-38 162.5 140 57.1
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 1.9e-37 160.2 223 42.6
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 1.4e-35 154.1 210 44.3
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 1.6e-28 130.6 199 40.2
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 2.2e-28 130.2 201 39.8
CBR_g36821 Chara braunii HOM05D005810 ORTHO05D007279 8.2e-20 101.7 295 29.8
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 7.2e-16 88.6 262 27.9
SHI07786 Sapria himalayana HOM05D005810 ORTHO05D007279 5.1e-14 82.4 53 75.5
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 4.8e-12 75.9 50 68.0
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 2.6e-10 70.1 190 31.1
Lsat_1_v5_gn_5_94521 Lactuca sativa HOM05D000428 ORTHO05D022850 5.0e-09 65.9 69 50.7


User provided reference genes

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