Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005710g0050 Nicotiana tabacum HOM05D007256 ORTHO05D009109 1.5e-76 289.3 129 100.0
Nitab4.5_0002783g0030 Nicotiana tabacum HOM05D007256 ORTHO05D009109 1.4e-71 272.7 149 84.6
CAN.G1374.8 Capsicum annuum HOM05D007256 ORTHO05D009109 3.0e-69 265.0 130 90.0
PGSC0003DMG400002748 Solanum tuberosum HOM05D007256 ORTHO05D009109 5.1e-69 264.2 130 90.8
Solyc01g100990.3 Solanum lycopersicum HOM05D007256 ORTHO05D009109 2.4e-66 255.4 151 77.5
Sopen01g044450 Solanum pennellii HOM05D007256 ORTHO05D009109 5.9e-65 250.8 151 76.2
Peaxi162Scf00357g00431 Petunia axillaris HOM05D007256 ORTHO05D009109 5.1e-61 237.7 150 74.0
Nn4g25434 Nelumbo nucifera HOM05D007256 ORTHO05D009109 1.8e-53 212.6 148 67.6
Hma1.2p1_0052F.1_g030520 Hydrangea macrophylla HOM05D007256 ORTHO05D009109 2.4e-50 202.2 136 66.9
GSVIVG01031300001 Vitis vinifera HOM05D007256 ORTHO05D009109 1.2e-49 199.9 154 60.4
Oeu060662.1 Olea europaea HOM05D007256 ORTHO05D009109 1.6e-49 199.5 160 60.0
TAR362G0938 Trochodendron aralioides HOM05D007256 ORTHO05D009109 2.0e-49 199.1 153 62.1
CiPaw.07G034000 Carya illinoinensis HOM05D007256 ORTHO05D009109 5.9e-49 197.6 132 67.4
Cc02_g35540 Coffea canephora HOM05D007256 ORTHO05D009109 1.0e-48 196.8 140 68.6
Cfa006739 Carpinus fangiana HOM05D007256 ORTHO05D009109 2.2e-48 195.7 131 68.7
SGA_v2.0_scaffold438G51636 Striga asiatica HOM05D007256 ORTHO05D009109 3.2e-47 191.8 135 65.9
Aqoxy2G02591 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 7.2e-47 190.7 132 68.9
AUR62006795 Chenopodium quinoa HOM05D007256 ORTHO05D009109 8.0e-46 187.2 142 62.7
Ciclev10012993m.g Citrus clementina HOM05D007256 ORTHO05D009109 1.0e-45 186.8 157 58.6
MSTRG.20366 Avicennia marina HOM05D007256 ORTHO05D009109 1.4e-45 186.4 159 59.1
Prupe.6G307100 Prunus persica HOM05D007256 ORTHO05D009109 1.4e-45 186.4 152 59.2
PSO210G0513 Papaver somniferum HOM05D007256 ORTHO05D009109 1.8e-45 186.0 155 56.8
PSO761G0366 Papaver somniferum HOM05D007256 ORTHO05D009109 4.0e-45 184.9 155 56.8
CANSAT54G0501 Cannabis sativa HOM05D007256 ORTHO05D009109 2.0e-44 182.6 154 57.8
FvH4_6g08160 Fragaria vesca HOM05D007256 ORTHO05D009109 3.3e-44 181.8 142 60.6
Zm00001eb333750 Zea mays HOM05D007256 ORTHO05D009109 3.3e-44 181.8 167 55.1
Haze_04019 Corylus avellana HOM05D007256 ORTHO05D009109 4.4e-44 181.4 154 57.8
Migut.B00859 Erythranthe guttata HOM05D007256 ORTHO05D009109 4.4e-44 181.4 152 58.6
COL.COLO4_05498 Corchorus olitorius HOM05D007256 ORTHO05D009109 7.5e-44 180.6 131 64.1
QL03p009011 Quercus lobata HOM05D007256 ORTHO05D009109 7.5e-44 180.6 155 57.4
RcHm_v2.0_Chr3g0458031 Rosa chinensis HOM05D007256 ORTHO05D009109 7.5e-44 180.6 154 55.8
QL03p009202 Quercus lobata HOM05D007256 ORTHO05D009109 2.2e-43 179.1 155 56.8
Duzib177G1002 Durio zibethinus HOM05D007256 ORTHO05D009109 2.8e-43 178.7 135 60.7
EL10Ac4g09530 Beta vulgaris HOM05D007256 ORTHO05D009109 3.7e-43 178.3 133 62.4
SalBow7G1589 Salvia bowleyana HOM05D007256 ORTHO05D009109 3.7e-43 178.3 180 53.9
Gohir.D13G028200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 4.8e-43 177.9 135 62.2
Gorai.013G032200 Gossypium raimondii HOM05D007256 ORTHO05D009109 4.8e-43 177.9 135 62.2
Thecc.05G327400 Theobroma cacao HOM05D007256 ORTHO05D009109 4.8e-43 177.9 138 60.9
FAN09G0386 Fragaria x ananassa HOM05D007256 ORTHO05D009109 8.2e-43 177.2 154 55.8
Gohir.A13G030200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 1.8e-42 176.0 135 63.0
ECA238G0534 Erigeron canadensis HOM05D007256 ORTHO05D009109 2.4e-42 175.6 159 54.1
Eucgr.B01795 Eucalyptus grandis HOM05D007256 ORTHO05D009109 2.4e-42 175.6 151 57.0
Manes.08G108700 Manihot esculenta HOM05D007256 ORTHO05D009109 4.1e-42 174.9 158 55.1
FAN02G0906 Fragaria x ananassa HOM05D007256 ORTHO05D009109 9.1e-42 173.7 154 55.2
ClCG03G017800 Citrullus lanatus HOM05D007256 ORTHO05D009109 1.2e-41 173.3 155 53.5
Lsat_1_v5_gn_2_17440 Lactuca sativa HOM05D007256 ORTHO05D009109 1.2e-41 173.3 143 58.7
FAN14G3866 Fragaria x ananassa HOM05D007256 ORTHO05D009109 1.6e-41 172.9 147 57.1
DCAR_002110 Daucus carota HOM05D007256 ORTHO05D009109 2.7e-41 172.2 149 57.0
CDE08G0276 Ceratophyllum demersum HOM05D007256 ORTHO05D009109 5.9e-41 171.0 131 61.8
HanXRQChr14g0433581 Helianthus annuus HOM05D007256 ORTHO05D009109 7.7e-41 170.6 146 58.2
TWI12G0874 Tripterygium wilfordii HOM05D007256 ORTHO05D009109 7.7e-41 170.6 157 55.4
Ca_10190_v3 Cicer arietinum L. HOM05D007256 ORTHO05D009109 2.9e-40 168.7 130 58.5
CsaV3_1G037970 Cucumis sativus L. HOM05D007256 ORTHO05D009109 6.5e-40 167.5 157 51.0
Duzib177G0019 Durio zibethinus HOM05D007256 ORTHO05D009109 6.5e-40 167.5 160 52.5
QL03p009259 Quercus lobata HOM05D007256 ORTHO05D009109 6.5e-40 167.5 155 55.5
TPR.G2616 Trifolium pratense HOM05D007256 ORTHO05D009109 8.5e-40 167.2 129 58.1
Os01g0252200 Oryza sativa ssp. japonica HOM05D007256 ORTHO05D009109 1.1e-39 166.8 168 50.0
Potri.013G004801 Populus trichocarpa HOM05D007256 ORTHO05D009109 5.5e-39 164.5 152 54.6
unitig_699.g19800 Utricularia gibba HOM05D007256 ORTHO05D009109 7.2e-39 164.1 176 48.3
Atru.chr12.1603 Acer truncatum HOM05D007256 ORTHO05D009109 9.4e-39 163.7 179 49.2
Hund07289 Selenicereus undatus HOM05D007256 ORTHO05D009109 2.1e-38 162.5 235 39.1
Sabra13G0003900 Salix brachista HOM05D007256 ORTHO05D009109 8.0e-38 160.6 151 53.6
Phvul.007G203900 Phaseolus vulgaris HOM05D007256 ORTHO05D009109 3.0e-37 158.7 133 59.4
MELO3C015247.2 Cucumis melo HOM05D000487 ORTHO05D000405 5.2e-37 157.9 153 50.3
Lalb_Chr02g0147641 Lupinus albus HOM05D007256 ORTHO05D009109 5.2e-37 157.9 127 57.5
Lj5g0000046 Lotus japonicus HOM05D007256 ORTHO05D009109 6.8e-37 157.5 140 54.3
MD12G1202300 Malus domestica HOM05D007256 ORTHO05D009109 6.8e-37 157.5 146 52.7
Glyma.10G144700 Glycine max HOM05D007256 ORTHO05D009109 1.5e-36 156.4 136 56.6
VMungo0720G0365 Vigna mungo HOM05D007256 ORTHO05D009109 3.4e-36 155.2 133 57.9
Gorai.001G184000 Gossypium raimondii HOM05D007256 ORTHO05D009109 5.7e-36 154.5 134 57.5
Psat1g134200 Pisum sativum HOM05D007256 ORTHO05D009109 7.5e-36 154.1 130 55.4
AL6G38610 Arabidopsis lyrata HOM05D007256 ORTHO05D009109 1.7e-35 152.9 150 50.7
Medtr1g084750 Medicago truncatula HOM05D007256 ORTHO05D009109 2.8e-35 152.1 130 55.4
Aa31LG11G9900 Aethionema arabicum HOM05D007256 ORTHO05D009109 4.8e-35 151.4 138 56.5
TPR.G2644 Trifolium pratense HOM05D007256 ORTHO05D009109 1.1e-34 150.2 136 52.9
arahy.Tifrunner.gnm1.ann1.Q851GZ Arachis hypogaea HOM05D007256 ORTHO05D009109 3.1e-34 148.7 140 50.7
arahy.Tifrunner.gnm1.ann1.H7RZSB Arachis hypogaea HOM05D007256 ORTHO05D009109 5.4e-34 147.9 140 50.7
HPP92_001218 Vanilla planifolia HOM05D007256 ORTHO05D009109 1.6e-33 146.4 133 54.9
BcaB04g19715 Brassica carinata HOM05D007256 ORTHO05D009109 1.0e-32 143.7 149 51.0
A09p05700 Brassica napus HOM05D007256 ORTHO05D009109 1.0e-32 143.7 152 48.0
THA.LOC104821748 Tarenaya hassleriana HOM05D007256 ORTHO05D009109 1.3e-32 143.3 143 51.7
SEGI_23053 Sequoiadendron giganteum HOM05D007256 ORTHO05D009109 1.7e-32 142.9 158 46.2
Sed0013353 Sechium edule HOM05D007256 ORTHO05D009109 2.9e-32 142.1 154 47.4
Thhalv10005088m.g Eutrema salsugineum HOM05D007256 ORTHO05D009109 8.6e-32 140.6 148 48.6
Cpa.g.sc48.207 Carica papaya HOM05D007256 ORTHO05D009109 1.1e-31 140.2 147 49.0
Sp2g21240 Schrenkiella parvula HOM05D007256 ORTHO05D009109 5.5e-31 137.9 132 53.0
Sc09g0002500 Simmondsia chinensis HOM05D007256 ORTHO05D009109 5.5e-31 137.9 94 66.0
AT5G26749 Arabidopsis thaliana HOM05D007256 ORTHO05D009109 9.5e-31 137.1 170 43.5
BcaC04g23634 Brassica carinata HOM05D007256 ORTHO05D009109 3.6e-30 135.2 151 47.0
C09p06290 Brassica napus HOM05D007256 ORTHO05D009109 3.6e-30 135.2 151 47.0
Pp3c18_1910 Physcomitrium patens HOM05D007256 ORTHO05D009109 8.0e-30 134.0 137 51.1
ATR0693G354 Amborella trichopoda HOM05D007256 ORTHO05D009109 2.3e-29 132.5 80 70.0
BraA09t36210Z Brassica rapa HOM05D007256 ORTHO05D009109 2.3e-29 132.5 169 43.2
vmacro19770 Vaccinium macrocarpon HOM05D007256 ORTHO05D009109 3.0e-29 132.1 221 36.2
BolC9t53549H Brassica oleracea HOM05D007256 ORTHO05D009109 4.9e-27 124.8 167 42.5
Mapoly0054s0011 Marchantia polymorpha HOM05D007256 ORTHO05D009109 3.1e-26 122.1 153 43.1
FAN05G3272 Fragaria x ananassa HOM05D000487 ORTHO05D000405 5.0e-24 114.8 117 50.4
Gohir.D01G139700 Gossypium hirsutum HOM05D007256 ORTHO05D009109 6.6e-24 114.4 107 53.3
Carub.0006s2440 Capsella rubella HOM05D007256 ORTHO05D009109 2.8e-22 109.0 90 56.7
Ah.10g027130 Amaranthus hybridus HOM05D007256 ORTHO05D009109 1.5e-20 103.2 69 66.7
Aqoxy4G00797 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 1.5e-20 103.2 129 45.7
PGR042G2181 Punica granatum HOM05D007256 ORTHO05D009109 9.8e-20 100.5 112 48.2
Rhsim05G0121300 Rhododendron simsii HOM05D007256 ORTHO05D009109 2.2e-19 99.4 70 65.7
HPP92_001189 Vanilla planifolia HOM05D007256 ORTHO05D009109 4.7e-14 81.6 44 75.0
Nitab4.5_0000185g0380 Nicotiana tabacum HOM05D007256 ORTHO05D009109 5.2e-13 78.2 39 87.2
CARHR186830 Cardamine hirsuta HOM05D007256 ORTHO05D009109 5.8e-12 74.7 41 78.0
SHI06526 Sapria himalayana HOM05D007256 ORTHO05D009109 1.7e-11 73.2 43 65.1
Glyma.20G093702 Glycine max HOM05D007256 ORTHO05D009109 7.0e-10 67.8 68 47.1
Gohir.D01G148000 Gossypium hirsutum HOM05D002544 ORTHO05D009109 1.3e-08 63.5 71 49.3
Cc02_g35520 Coffea canephora HOM05D007256 ORTHO05D009109 6.6e-08 61.2 51 56.9


User provided reference genes

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