Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005621g0040 Nicotiana tabacum HOM05D005906 ORTHO05D007359 3.7e-51 204.9 128 100.0
Nitab4.5_0000129g0230 Nicotiana tabacum HOM05D005906 ORTHO05D007359 1.3e-32 143.3 95 85.3
Nitab4.5_0001983g0010 Nicotiana tabacum HOM05D005906 ORTHO05D007359 1.4e-31 139.8 96 82.3
Nitab4.5_0010403g0020 Nicotiana tabacum HOM05D005906 ORTHO05D007359 1.4e-29 133.3 99 85.9
Peaxi162Scf00329g00515 Petunia axillaris HOM05D005906 ORTHO05D007359 2.0e-28 129.4 96 76.0
CAN.G419.29 Capsicum annuum HOM05D005906 ORTHO05D007359 6.3e-27 124.4 115 65.2
Sopen04g003870 Solanum pennellii HOM05D005906 ORTHO05D007359 7.7e-25 117.5 94 71.3
Solyc04g008700.3 Solanum lycopersicum HOM05D005906 ORTHO05D007359 3.8e-24 115.2 94 70.2
CSS0007611 Camellia sinensis var. sinensis HOM05D005906 ORTHO05D007359 1.8e-18 96.3 94 62.8
Dinv12052 Davidia involucrata HOM05D005906 ORTHO05D007359 3.1e-18 95.5 95 63.2
Rhsim09G0071900 Rhododendron simsii HOM05D005906 ORTHO05D007359 7.0e-18 94.4 119 50.4
GSVIVG01010209001 Vitis vinifera HOM05D005906 ORTHO05D007359 1.3e-16 90.1 118 53.4
Haze_11727 Corylus avellana HOM05D005906 ORTHO05D007359 1.7e-16 89.7 117 49.6
CiPaw.05G166700 Carya illinoinensis HOM05D005906 ORTHO05D007359 5.0e-16 88.2 117 47.9
Actinidia04315 Actinidia chinensis HOM05D005906 ORTHO05D007359 1.1e-15 87.0 117 51.3
Atru.chr11.1229 Acer truncatum HOM05D005906 ORTHO05D007359 1.9e-15 86.3 118 52.5
Atru.chr11.1316 Acer truncatum HOM05D005906 ORTHO05D007359 1.9e-15 86.3 118 52.5
Ciclev10030612m.g Citrus clementina HOM05D005906 ORTHO05D007359 4.2e-15 85.1 117 49.6
vmacro16015 Vaccinium macrocarpon HOM05D005906 ORTHO05D007359 5.5e-15 84.7 96 55.2
Cfa008717 Carpinus fangiana HOM05D005906 ORTHO05D007359 1.2e-14 83.6 117 47.0
Aqoxy3G04280 Aquilegia oxysepala HOM05D005906 ORTHO05D007359 2.1e-14 82.8 119 45.4
TAR371G1124 Trochodendron aralioides HOM05D005906 ORTHO05D007359 4.7e-14 81.6 119 51.3
AUR62015199 Chenopodium quinoa HOM05D005906 ORTHO05D007359 8.0e-14 80.9 97 53.6
ECA246G1682 Erigeron canadensis HOM05D005906 ORTHO05D007359 1.0e-13 80.5 116 44.8
Duzib251G0270 Durio zibethinus HOM05D005906 ORTHO05D007359 1.4e-13 80.1 117 49.6
Potri.010G170400 Populus trichocarpa HOM05D005906 ORTHO05D007359 1.4e-13 80.1 113 49.6
MBI03_g33918_MAGBIO Magnolia biondii HOM05D005906 ORTHO05D007359 2.3e-13 79.3 116 44.8
QL03p043467 Quercus lobata HOM05D005906 ORTHO05D007359 3.0e-13 79.0 113 47.8
DCAR_006599 Daucus carota HOM05D005906 ORTHO05D007359 8.8e-13 77.4 97 53.6
Sabra10G0130100 Salix brachista HOM05D005906 ORTHO05D007359 1.2e-12 77.0 113 46.9
CANSAT64G0121 Cannabis sativa HOM05D005906 ORTHO05D007359 2.0e-12 76.3 119 55.5
Gohir.A01G145818 Gossypium hirsutum HOM05D005906 ORTHO05D007359 3.4e-12 75.5 117 47.0
Gorai.002G167700 Gossypium raimondii HOM05D005906 ORTHO05D007359 4.4e-12 75.1 117 47.0
Lju1295A4T31 Lonicera japonica HOM05D005906 ORTHO05D007359 5.7e-12 74.7 99 50.5
EL10Ac9g22918 Beta vulgaris HOM05D005906 ORTHO05D007359 9.8e-12 73.9 117 47.0
MELO3C024279.2 Cucumis melo HOM05D005906 ORTHO05D007359 9.8e-12 73.9 119 43.7
Prupe.1G345100 Prunus persica HOM05D005906 ORTHO05D007359 9.8e-12 73.9 117 44.4
Thecc.02G295800 Theobroma cacao HOM05D005906 ORTHO05D007359 9.8e-12 73.9 97 51.5
Gohir.D01G138300 Gossypium hirsutum HOM05D005906 ORTHO05D007359 1.7e-11 73.2 117 46.2
Manes.03G080900 Manihot esculenta HOM05D005906 ORTHO05D007359 1.7e-11 73.2 94 51.1
RcHm_v2.0_Chr4g0446421 Rosa chinensis HOM05D005906 ORTHO05D007359 3.7e-11 72.0 117 45.3
VMungo1127G1981 Vigna mungo HOM05D005906 ORTHO05D007359 3.7e-11 72.0 118 41.5
Phvul.011G031500 Phaseolus vulgaris HOM05D005906 ORTHO05D007359 4.8e-11 71.6 116 43.1
COL.COLO4_16625 Corchorus olitorius HOM05D005906 ORTHO05D007359 8.3e-11 70.9 95 51.6
FvH4_4g36700 Fragaria vesca HOM05D005906 ORTHO05D007359 1.1e-10 70.5 117 44.4
FAN12G0559 Fragaria x ananassa HOM05D005906 ORTHO05D007359 1.1e-10 70.5 117 44.4
FAN07G0309 Fragaria x ananassa HOM05D005906 ORTHO05D007359 1.8e-10 69.7 117 43.6
Oeu022359.1 Olea europaea HOM05D005906 ORTHO05D007359 2.4e-10 69.3 115 42.6
MD16G1000200 Malus domestica HOM05D005906 ORTHO05D007359 3.1e-10 68.9 116 41.4
AUR62017662 Chenopodium quinoa HOM05D005906 ORTHO05D007359 7.0e-10 67.8 97 47.4
ATR0618G038 Amborella trichopoda HOM05D005906 ORTHO05D007359 9.1e-10 67.4 118 42.4
ClCG09G001670 Citrullus lanatus HOM05D005906 ORTHO05D007359 9.1e-10 67.4 97 46.4
Lj3g0019719 Lotus japonicus HOM05D005906 ORTHO05D007359 9.1e-10 67.4 96 44.8
Lalb_Chr01g0001511 Lupinus albus HOM05D005906 ORTHO05D007359 9.1e-10 67.4 116 41.4
TPR.G21563 Trifolium pratense HOM05D005906 ORTHO05D007359 9.1e-10 67.4 116 40.5
Eucgr.G02565 Eucalyptus grandis HOM05D005906 ORTHO05D007359 1.6e-09 66.6 91 50.5
FAN17G1621 Fragaria x ananassa HOM05D005906 ORTHO05D007359 1.6e-09 66.6 116 42.2
MD13G1007900 Malus domestica HOM05D005906 ORTHO05D007359 1.6e-09 66.6 116 42.2
Nn3g18680 Nelumbo nucifera HOM05D005906 ORTHO05D007359 2.0e-09 66.2 115 43.5
arahy.Tifrunner.gnm1.ann1.KE9NE3 Arachis hypogaea HOM05D005906 ORTHO05D007359 3.5e-09 65.5 94 45.7
Sc10g0007040 Simmondsia chinensis HOM05D005906 ORTHO05D007359 3.5e-09 65.5 111 45.0
TWI53G0095 Tripterygium wilfordii HOM05D005906 ORTHO05D007359 5.9e-09 64.7 119 39.5
Glyma.12G028100 Glycine max HOM05D005906 ORTHO05D007359 1.3e-08 63.5 96 41.7
CsaV3_7G033650 Cucumis sativus L. HOM05D005906 ORTHO05D007359 1.7e-08 63.2 119 42.0
Medtr4g074440 Medicago truncatula HOM05D005906 ORTHO05D007359 2.2e-08 62.8 97 44.3
arahy.Tifrunner.gnm1.ann1.LWY0NT Arachis hypogaea HOM05D005906 ORTHO05D007359 2.9e-08 62.4 94 44.7
Psat7g176600 Pisum sativum HOM05D005906 ORTHO05D007359 2.9e-08 62.4 96 42.7
Glyma.11G102600 Glycine max HOM05D005906 ORTHO05D007359 3.8e-08 62.0 114 38.6
Glyma.11G103100 Glycine max HOM05D005906 ORTHO05D007359 3.8e-08 62.0 114 38.6
arahy.Tifrunner.gnm1.ann1.HBZ9IW Arachis hypogaea HOM05D005906 ORTHO05D007359 5.0e-08 61.6 92 45.7
Migut.N00351 Erythranthe guttata HOM05D005906 ORTHO05D007359 5.0e-08 61.6 81 50.6
PSO782G0435 Papaver somniferum HOM05D005906 ORTHO05D007359 5.0e-08 61.6 94 46.8
A05p29280 Brassica napus HOM05D005906 ORTHO05D007359 1.1e-07 60.5 86 50.0
BraA05t21811Z Brassica rapa HOM05D005906 ORTHO05D007359 1.1e-07 60.5 86 50.0
TWI74G1493 Tripterygium wilfordii HOM05D005906 ORTHO05D007359 1.5e-07 60.1 115 40.9
unitig_26.g9977 Utricularia gibba HOM05D005906 ORTHO05D007359 1.9e-07 59.7 92 46.7
BcaC05g28400 Brassica carinata HOM05D005906 ORTHO05D007359 2.5e-07 59.3 86 48.8
C05p44790 Brassica napus HOM05D005906 ORTHO05D007359 2.5e-07 59.3 86 48.8
BolC5t33205H Brassica oleracea HOM05D005906 ORTHO05D007359 2.5e-07 59.3 86 48.8
BcaB06g26053 Brassica carinata HOM05D005906 ORTHO05D007359 3.2e-07 58.9 86 50.0
HanXRQChr17g0540691 Helianthus annuus HOM05D005906 ORTHO05D007359 5.5e-07 58.2 116 37.9
PSO063G6838 Papaver somniferum HOM05D005906 ORTHO05D007359 5.5e-07 58.2 94 44.7
Lsat_1_v5_gn_0_9300 Lactuca sativa HOM05D005906 ORTHO05D007359 9.4e-07 57.4 85 47.1
PGR142G1078 Punica granatum HOM05D005906 ORTHO05D007359 9.4e-07 57.4 96 47.9
Sp3g17850 Schrenkiella parvula HOM05D005906 ORTHO05D007359 2.1e-06 56.2 88 46.6
HPP92_015160 Vanilla planifolia HOM05D005906 ORTHO05D007359 4.7e-06 55.1 114 33.3
Ca_03032_v3 Cicer arietinum L. HOM05D005906 ORTHO05D007359 6.1e-06 54.7 94 40.4


User provided reference genes

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