Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005427g0010 Nicotiana tabacum HOM05D005531 ORTHO05D006332 6.5e-76 287.3 148 100.0
Peaxi162Scf00568g00523 Petunia axillaris HOM05D005531 ORTHO05D006332 4.4e-48 194.9 108 92.6
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-47 191.4 126 80.2
CAN.G87.3 Capsicum annuum HOM05D005531 ORTHO05D006332 1.3e-44 183.3 126 77.8
Nitab4.5_0014896g0010 Nicotiana tabacum HOM05D005531 ORTHO05D006332 1.4e-41 173.3 88 97.7
DCAR_028442 Daucus carota HOM05D005531 ORTHO05D006332 1.1e-35 153.7 116 72.4
GSVIVG01038136001 Vitis vinifera HOM05D005531 ORTHO05D006332 3.3e-35 152.1 116 69.8
Oeu021570.1 Olea europaea HOM05D005531 ORTHO05D006332 1.6e-34 149.8 116 69.8
ClCG04G002840 Citrullus lanatus HOM05D005531 ORTHO05D006332 4.7e-34 148.3 115 68.7
Dinv09088 Davidia involucrata HOM05D005531 ORTHO05D006332 1.8e-33 146.4 98 76.5
MD04G1048800 Malus domestica HOM05D005531 ORTHO05D006332 3.0e-33 145.6 122 67.2
MSTRG.22027 Avicennia marina HOM05D005531 ORTHO05D006332 6.8e-33 144.4 116 67.2
CSS0024284 Camellia sinensis var. sinensis HOM05D005531 ORTHO05D006332 6.8e-33 144.4 107 67.3
Ciclev10021434m.g Citrus clementina HOM05D005531 ORTHO05D006332 6.8e-33 144.4 116 66.4
QL10p054586 Quercus lobata HOM05D005531 ORTHO05D006332 6.8e-33 144.4 116 67.2
QL93p1902_0778 Quercus lobata HOM05D005531 ORTHO05D006332 6.8e-33 144.4 116 67.2
SGA_v2.0_scaffold25G10999 Striga asiatica HOM05D005531 ORTHO05D006332 8.9e-33 144.1 98 76.5
FvH4_5g12060 Fragaria vesca HOM05D005531 ORTHO05D006332 1.2e-32 143.7 117 65.0
FAN04G0151 Fragaria x ananassa HOM05D005531 ORTHO05D006332 1.2e-32 143.7 117 65.0
FAN13G1713 Fragaria x ananassa HOM05D005531 ORTHO05D006332 1.2e-32 143.7 117 65.0
FAN18G3014 Fragaria x ananassa HOM05D005531 ORTHO05D006332 1.2e-32 143.7 117 65.0
FAN18G3485 Fragaria x ananassa HOM05D005531 ORTHO05D006332 1.2e-32 143.7 117 65.0
Oeu016608.2 Olea europaea HOM05D005531 ORTHO05D006332 1.2e-32 143.7 116 66.4
Actinidia12100 Actinidia chinensis HOM05D005531 ORTHO05D006332 1.5e-32 143.3 115 67.0
MELO3C033213.2 Cucumis melo HOM05D005531 ORTHO05D006332 1.5e-32 143.3 115 67.0
CsaV3_4G029900 Cucumis sativus L. HOM05D005531 ORTHO05D006332 1.5e-32 143.3 115 67.0
Migut.N03071 Erythranthe guttata HOM05D005531 ORTHO05D006332 2.0e-32 142.9 116 68.1
Thecc.04G166800 Theobroma cacao HOM05D005531 ORTHO05D006332 2.0e-32 142.9 114 67.5
CiPaw.01G171100 Carya illinoinensis HOM05D005531 ORTHO05D006332 3.4e-32 142.1 116 66.4
Cc01_g03590 Coffea canephora HOM05D005531 ORTHO05D006332 3.4e-32 142.1 109 69.7
HanXRQChr14g0432131 Helianthus annuus HOM05D005531 ORTHO05D006332 3.4e-32 142.1 115 61.7
Manes.04G036700 Manihot esculenta HOM05D005531 ORTHO05D006332 5.8e-32 141.4 116 67.2
COL.COLO4_07535 Corchorus olitorius HOM05D005531 ORTHO05D006332 9.8e-32 140.6 96 74.0
Gohir.A02G090900 Gossypium hirsutum HOM05D005531 ORTHO05D006332 9.8e-32 140.6 114 65.8
Gohir.D02G109600 Gossypium hirsutum HOM05D005531 ORTHO05D006332 1.7e-31 139.8 114 65.8
Gorai.005G123800 Gossypium raimondii HOM05D005531 ORTHO05D006332 1.7e-31 139.8 114 65.8
Eucgr.A00006 Eucalyptus grandis HOM05D005531 ORTHO05D006332 2.9e-31 139.0 116 64.7
FAN08G1892 Fragaria x ananassa HOM05D005531 ORTHO05D006332 3.7e-31 138.7 117 63.2
Ca_18643_v3 Cicer arietinum L. HOM05D005531 ORTHO05D006332 4.9e-31 138.3 116 64.7
Sed0016017 Sechium edule HOM05D005531 ORTHO05D006332 4.9e-31 138.3 116 64.7
Lj4g0014314 Lotus japonicus HOM05D005531 ORTHO05D006332 6.4e-31 137.9 116 63.8
Medtr4g087250 Medicago truncatula HOM05D005531 ORTHO05D006332 6.4e-31 137.9 116 62.9
Phvul.003G296200 Phaseolus vulgaris HOM05D005531 ORTHO05D006332 8.3e-31 137.5 116 62.1
PGR042G0031 Punica granatum HOM05D005531 ORTHO05D006332 8.3e-31 137.5 114 64.0
SalBow6G4103 Salvia bowleyana HOM05D005531 ORTHO05D006332 8.3e-31 137.5 98 73.5
Psat7g121280 Pisum sativum HOM05D005531 ORTHO05D006332 1.1e-30 137.1 98 69.4
RcHm_v2.0_Chr4g0406021 Rosa chinensis HOM05D005531 ORTHO05D006332 1.4e-30 136.7 117 64.1
Potri.013G125700 Populus trichocarpa HOM05D005531 ORTHO05D006332 2.4e-30 136.0 115 65.2
TPR.G23541 Trifolium pratense HOM05D005531 ORTHO05D006332 2.4e-30 136.0 116 62.1
unitig_0.g2525 Utricularia gibba HOM05D005531 ORTHO05D006332 3.2e-30 135.6 114 64.9
Cpa.g.sc9.358 Carica papaya HOM05D005531 ORTHO05D006332 4.1e-30 135.2 96 74.0
ECA238G0637 Erigeron canadensis HOM05D005531 ORTHO05D006332 4.1e-30 135.2 115 60.0
TWI15G0620 Tripterygium wilfordii HOM05D005531 ORTHO05D006332 4.1e-30 135.2 113 65.5
AUR62023806 Chenopodium quinoa HOM05D005531 ORTHO05D006332 5.4e-30 134.8 116 61.2
Cfa015263 Carpinus fangiana HOM05D005531 ORTHO05D006332 7.0e-30 134.4 99 70.7
Aqoxy1G02291 Aquilegia oxysepala HOM05D005531 ORTHO05D006332 1.2e-29 133.7 95 73.7
AUR62002375 Chenopodium quinoa HOM05D005531 ORTHO05D006332 2.0e-29 132.9 116 59.5
THA.LOC104817577 Tarenaya hassleriana HOM05D005531 ORTHO05D006332 4.6e-29 131.7 96 71.9
CANSAT54G2817 Cannabis sativa HOM05D005531 ORTHO05D006332 1.7e-28 129.8 115 55.7
Glyma.07G208400 Glycine max HOM05D005531 ORTHO05D006332 3.0e-28 129.0 116 59.5
Glyma.02G137000 Glycine max HOM05D005531 ORTHO05D006332 3.9e-28 128.6 116 58.6
Nn7g37674 Nelumbo nucifera HOM05D005531 ORTHO05D006332 8.6e-28 127.5 94 69.1
HPP92_024943 Vanilla planifolia HOM05D005531 ORTHO05D006332 8.6e-28 127.5 96 71.9
HPP92_024926 Vanilla planifolia HOM05D005531 ORTHO05D006332 1.5e-27 126.7 96 71.9
MBI08_g25563_MAGBIO Magnolia biondii HOM05D005531 ORTHO05D006332 1.2e-26 123.6 114 58.8
PSO017G4245 Papaver somniferum HOM05D005531 ORTHO05D006332 2.8e-26 122.5 95 67.4
Os03g0227300 Oryza sativa ssp. japonica HOM05D005531 ORTHO05D006332 1.4e-25 120.2 95 64.2
Sp5g10250 Schrenkiella parvula HOM05D005531 ORTHO05D006332 1.8e-25 119.8 118 53.4
Aa31LG10G7090 Aethionema arabicum HOM05D005531 ORTHO05D006332 2.3e-25 119.4 115 55.7
Thhalv10010410m.g Eutrema salsugineum HOM05D005531 ORTHO05D006332 2.3e-25 119.4 115 53.9
Rhsim02G0083700 Rhododendron simsii HOM05D005531 ORTHO05D006332 2.3e-25 119.4 96 66.7
AT3G52050 Arabidopsis thaliana HOM05D005531 ORTHO05D006332 6.8e-25 117.9 115 54.8
BcaNung06967 Brassica carinata HOM05D005531 ORTHO05D006332 6.8e-25 117.9 119 50.4
Carub.0005s1837 Capsella rubella HOM05D005531 ORTHO05D006332 1.5e-24 116.7 115 53.9
PSO675G8407 Papaver somniferum HOM05D005531 ORTHO05D006332 1.5e-24 116.7 95 65.3
AL5G32590 Arabidopsis lyrata HOM05D005531 ORTHO05D006332 2.6e-24 115.9 115 53.9
Zm00001eb399280 Zea mays HOM05D005531 ORTHO05D006332 2.6e-24 115.9 115 54.8
BcaB01g00451 Brassica carinata HOM05D005531 ORTHO05D006332 3.4e-24 115.5 119 49.6
C08p27300 Brassica napus HOM05D005531 ORTHO05D006332 3.4e-24 115.5 119 49.6
CDE07G1035 Ceratophyllum demersum HOM05D005531 ORTHO05D006332 3.4e-24 115.5 96 62.5
arahy.Tifrunner.gnm1.ann1.6AY0JN Arachis hypogaea HOM05D005531 ORTHO05D006332 4.4e-24 115.2 116 56.0
arahy.Tifrunner.gnm1.ann1.77ZG52 Arachis hypogaea HOM05D005531 ORTHO05D006332 4.4e-24 115.2 116 56.0
BolC8t50347H Brassica oleracea HOM05D005531 ORTHO05D006332 4.4e-24 115.2 115 51.3
PSO017G5810 Papaver somniferum HOM05D005531 ORTHO05D006332 4.4e-24 115.2 97 62.9
A09p45110 Brassica napus HOM05D005531 ORTHO05D006332 7.5e-24 114.4 115 50.4
BraA09t39972Z Brassica rapa HOM05D005531 ORTHO05D006332 2.2e-23 112.8 115 50.4
Duzib151G0770 Durio zibethinus HOM05D005531 ORTHO05D006332 9.2e-22 107.5 62 83.9
PSO675G6185 Papaver somniferum HOM05D005531 ORTHO05D006332 1.6e-21 106.7 106 56.6
Lalb_Chr16g0384491 Lupinus albus HOM05D005531 ORTHO05D006332 2.7e-21 105.9 136 47.8
ATR0743G039 Amborella trichopoda HOM05D005531 ORTHO05D006332 4.6e-21 105.1 94 59.6
QL10p054560 Quercus lobata HOM05D005531 ORTHO05D006332 4.6e-21 105.1 68 76.5
SEGI_24465 Sequoiadendron giganteum HOM05D005531 ORTHO05D006332 1.5e-19 100.1 94 57.4
MELO3C033507.2 Cucumis melo HOM05D005531 ORTHO05D006332 3.3e-19 99.0 71 71.8
EL10Ac3g06068 Beta vulgaris HOM05D005531 ORTHO05D006332 9.5e-19 97.4 98 56.1
SEGI_01886 Sequoiadendron giganteum HOM05D005531 ORTHO05D006332 9.5e-19 97.4 94 55.3
Lsat_1_v5_gn_2_38340 Lactuca sativa HOM05D005531 ORTHO05D006332 8.1e-18 94.4 115 49.6
SalBow1G7787 Salvia bowleyana HOM05D005531 ORTHO05D006332 1.1e-17 94.0 63 74.6
Prupe.1G206500 Prunus persica HOM05D005531 ORTHO05D006332 1.8e-17 93.2 115 52.2
Sabra13G0104500 Salix brachista HOM05D005531 ORTHO05D006332 2.3e-17 92.8 62 72.6
Hund12388 Selenicereus undatus HOM05D005531 ORTHO05D006332 1.2e-16 90.5 98 54.1
Sabra13G0104800 Salix brachista HOM05D005531 ORTHO05D006332 4.4e-16 88.6 62 71.0
Sabra13G0105100 Salix brachista HOM05D005531 ORTHO05D006332 4.4e-16 88.6 62 71.0
CDE07G1763 Ceratophyllum demersum HOM05D005531 ORTHO05D006332 1.9e-14 83.2 62 62.9
SMO232G0046 Selaginella moellendorffii HOM05D005531 ORTHO05D006332 1.0e-12 77.4 110 42.7
TAR362G0104 Trochodendron aralioides HOM05D005531 ORTHO05D006332 2.3e-12 76.3 59 67.8
Atru.chr4.1396 Acer truncatum HOM05D005531 ORTHO05D006332 5.6e-11 71.6 116 43.1
Pp3c16_17520 Physcomitrium patens HOM05D005531 ORTHO05D006332 9.5e-11 70.9 100 37.0
AagrBONN_evm.TU.Sc2ySwM_228.1809 Anthoceros agrestis HOM05D005531 ORTHO05D006332 2.8e-10 69.3 97 39.2
AagrBONN_evm.TU.Sc2ySwM_228.5815 Anthoceros agrestis HOM05D005531 ORTHO05D006332 1.2e-08 63.9 87 40.2


User provided reference genes

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