Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005317g0010 Nicotiana tabacum HOM05D005082 ORTHO05D006474 4.2e-110 401.4 201 100.0
Nitab4.5_0010601g0010 Nicotiana tabacum HOM05D005082 ORTHO05D006474 1.5e-104 382.9 198 97.5
Nitab4.5_0001220g0040 Nicotiana tabacum HOM05D005082 ORTHO05D006474 1.7e-103 379.4 198 96.5
Peaxi162Scf00362g00137 Petunia axillaris HOM05D005082 ORTHO05D006474 4.6e-101 371.3 198 93.9
CAN.G1645.8 Capsicum annuum HOM05D005082 ORTHO05D006474 1.5e-99 366.3 203 89.7
Solyc01g112290.4 Solanum lycopersicum HOM05D005082 ORTHO05D006474 6.9e-97 357.5 198 90.4
Sopen01g054400 Solanum pennellii HOM05D005082 ORTHO05D006474 1.5e-96 356.3 198 89.9
Dinv41859 Davidia involucrata HOM05D005082 ORTHO05D006474 2.0e-91 339.3 203 82.3
Lj5C170T16 Lonicera japonica HOM05D005082 ORTHO05D006474 5.3e-89 331.3 203 79.3
Dinv14185 Davidia involucrata HOM05D005082 ORTHO05D006474 3.4e-88 328.6 198 82.3
TAR628G0288 Trochodendron aralioides HOM05D005082 ORTHO05D006474 3.4e-88 328.6 203 78.3
GSVIVG01023855001 Vitis vinifera HOM05D005082 ORTHO05D006474 2.9e-87 325.5 203 78.8
Thecc.02G148100 Theobroma cacao HOM05D005082 ORTHO05D006474 1.1e-86 323.6 200 78.5
Migut.B00003 Erythranthe guttata HOM05D005082 ORTHO05D006474 1.9e-86 322.8 198 78.8
Gorai.002G014600 Gossypium raimondii HOM05D005082 ORTHO05D006474 4.2e-86 321.6 200 78.0
Cfa005396 Carpinus fangiana HOM05D005082 ORTHO05D006474 7.2e-86 320.9 198 78.8
CiPaw.05G095000 Carya illinoinensis HOM05D005082 ORTHO05D006474 7.2e-86 320.9 203 77.8
Ciclev10028098m.g Citrus clementina HOM05D005082 ORTHO05D006474 1.2e-85 320.1 198 79.3
MD05G1011800 Malus domestica HOM05D005082 ORTHO05D006474 1.2e-85 320.1 203 76.4
PGR042G3506 Punica granatum HOM05D005082 ORTHO05D006474 1.2e-85 320.1 198 79.8
Rhsim04G0008200 Rhododendron simsii HOM05D005082 ORTHO05D006474 1.6e-85 319.7 203 75.9
Oeu006114.1 Olea europaea HOM05D005082 ORTHO05D006474 2.1e-85 319.3 198 77.8
MSTRG.16959 Avicennia marina HOM05D005082 ORTHO05D006474 2.7e-85 318.9 198 77.3
Prupe.8G016800 Prunus persica HOM05D005082 ORTHO05D006474 3.6e-85 318.5 203 77.3
MD10G1011800 Malus domestica HOM05D005082 ORTHO05D006474 4.7e-85 318.2 203 76.4
Duzib248G1564 Durio zibethinus HOM05D005082 ORTHO05D006474 8.0e-85 317.4 200 77.5
QL11p056821 Quercus lobata HOM05D005082 ORTHO05D006474 1.4e-84 316.6 203 76.4
Gohir.D01G012800 Gossypium hirsutum HOM05D005082 ORTHO05D006474 1.8e-84 316.2 200 76.5
AUR62013197 Chenopodium quinoa HOM05D005082 ORTHO05D006474 6.7e-84 314.3 198 74.2
ClCG02G003240 Citrullus lanatus HOM05D005082 ORTHO05D006474 8.8e-84 313.9 198 75.3
Gohir.A01G011600 Gossypium hirsutum HOM05D005082 ORTHO05D006474 8.8e-84 313.9 200 76.5
Potri.009G169700 Populus trichocarpa HOM05D005082 ORTHO05D006474 8.8e-84 313.9 200 75.0
Duzib132G0508 Durio zibethinus HOM05D005082 ORTHO05D006474 1.1e-83 313.5 200 76.0
Sp2g27120 Schrenkiella parvula HOM05D005082 ORTHO05D006474 1.1e-83 313.5 198 76.3
Carub.0008s2483 Capsella rubella HOM05D005082 ORTHO05D006474 2.0e-83 312.8 198 76.3
AUR62010207 Chenopodium quinoa HOM05D005082 ORTHO05D006474 2.6e-83 312.4 198 73.7
CsaV3_7G002150 Cucumis sativus L. HOM05D005082 ORTHO05D006474 2.6e-83 312.4 198 74.7
Actinidia20586 Actinidia chinensis HOM05D005082 ORTHO05D006474 3.3e-83 312.0 203 74.9
Cpa.g.c29182.1 Carica papaya HOM05D005082 ORTHO05D006474 3.3e-83 312.0 198 77.3
Cc09_g10910 Coffea canephora HOM05D005082 ORTHO05D006474 4.4e-83 311.6 203 75.4
AT5G64050 Arabidopsis thaliana HOM05D005082 ORTHO05D006474 7.4e-83 310.8 198 75.8
Sabra04G0140300 Salix brachista HOM05D005082 ORTHO05D006474 7.4e-83 310.8 200 74.5
Aa31LG1G17860 Aethionema arabicum HOM05D005082 ORTHO05D006474 9.7e-83 310.5 198 74.2
Sed0020521 Sechium edule HOM05D005082 ORTHO05D006474 9.7e-83 310.5 198 74.2
THA.LOC104800058 Tarenaya hassleriana HOM05D005082 ORTHO05D006474 9.7e-83 310.5 200 75.0
SGA_v2.0_scaffold5G02667 Striga asiatica HOM05D005082 ORTHO05D006474 1.3e-82 310.1 209 73.2
EL10Ac9g21557 Beta vulgaris HOM05D005082 ORTHO05D006474 1.7e-82 309.7 198 74.2
CARHR277960 Cardamine hirsuta HOM05D005082 ORTHO05D006474 1.7e-82 309.7 198 75.3
MELO3C015693.2 Cucumis melo HOM05D005082 ORTHO05D006474 1.7e-82 309.7 198 73.7
TWI59G1375 Tripterygium wilfordii HOM05D005082 ORTHO05D006474 1.7e-82 309.7 198 75.8
Aqoxy6G02995 Aquilegia oxysepala HOM05D005082 ORTHO05D006474 3.7e-82 308.5 203 73.4
Manes.02G091600 Manihot esculenta HOM05D005082 ORTHO05D006474 3.7e-82 308.5 200 75.5
Eucgr.H05005 Eucalyptus grandis HOM05D005082 ORTHO05D006474 6.3e-82 307.8 203 74.9
Glyma.07G124000 Glycine max HOM05D005082 ORTHO05D006474 6.3e-82 307.8 198 75.8
Atru.BG.54.p Acer truncatum HOM05D005082 ORTHO05D006474 8.2e-82 307.4 200 73.0
AL8G41310 Arabidopsis lyrata HOM05D005082 ORTHO05D006474 8.2e-82 307.4 198 75.3
RcHm_v2.0_Chr6g0277491 Rosa chinensis HOM05D005082 ORTHO05D006474 8.2e-82 307.4 198 74.7
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 1.8e-81 306.2 203 72.4
BcaB02g09792 Brassica carinata HOM05D005082 ORTHO05D006474 4.1e-81 305.1 198 74.2
VMungo0331G1808 Vigna mungo HOM05D005082 ORTHO05D006474 5.3e-81 304.7 198 76.3
BcaC01g02661 Brassica carinata HOM05D005082 ORTHO05D006474 7.0e-81 304.3 198 74.2
A06p30760 Brassica napus HOM05D005082 ORTHO05D006474 7.0e-81 304.3 198 74.2
C03p62220 Brassica napus HOM05D005082 ORTHO05D006474 7.0e-81 304.3 198 74.2
BolC3t18485H Brassica oleracea HOM05D005082 ORTHO05D006474 7.0e-81 304.3 198 74.2
BraA06t26018Z Brassica rapa HOM05D005082 ORTHO05D006474 7.0e-81 304.3 198 74.2
ATR0605G166 Amborella trichopoda HOM05D005082 ORTHO05D006474 1.2e-80 303.5 198 73.7
Hund06352 Selenicereus undatus HOM05D005082 ORTHO05D006474 2.0e-80 302.8 198 74.7
DCAR_006224 Daucus carota HOM05D005082 ORTHO05D006474 2.6e-80 302.4 197 75.1
SalBow1G4726 Salvia bowleyana HOM05D005082 ORTHO05D006474 2.6e-80 302.4 198 73.7
PSO675G0919 Papaver somniferum HOM05D005082 ORTHO05D006474 3.5e-80 302.0 200 72.5
Ah.01g017700 Amaranthus hybridus HOM05D005082 ORTHO05D006474 7.7e-80 300.8 198 73.2
Thhalv10003868m.g Eutrema salsugineum HOM05D005082 ORTHO05D006474 7.7e-80 300.8 225 67.6
PSO210G0895 Papaver somniferum HOM05D005082 ORTHO05D006474 7.7e-80 300.8 200 71.5
Ca_25889_v3 Cicer arietinum L. HOM05D005082 ORTHO05D006474 2.2e-79 299.3 198 71.7
Glyma.03G097900 Glycine max HOM05D005082 ORTHO05D006474 2.2e-79 299.3 198 74.7
CDE06G2564 Ceratophyllum demersum HOM05D005082 ORTHO05D006474 2.9e-79 298.9 200 71.5
Phvul.010G038400 Phaseolus vulgaris HOM05D005082 ORTHO05D006474 5.0e-79 298.1 198 75.3
FAN15G2332 Fragaria x ananassa HOM05D005082 ORTHO05D006474 6.5e-79 297.7 203 70.4
FAN27G0598 Fragaria x ananassa HOM05D005082 ORTHO05D006474 6.5e-79 297.7 203 70.4
HanXRQChr14g0455171 Helianthus annuus HOM05D005082 ORTHO05D006474 6.5e-79 297.7 198 72.7
FAN24G2999 Fragaria x ananassa HOM05D005082 ORTHO05D006474 8.5e-79 297.4 203 70.0
Zm00001eb208250 Zea mays HOM05D005082 ORTHO05D006474 8.5e-79 297.4 198 71.7
FAN20G1299 Fragaria x ananassa HOM05D005082 ORTHO05D006474 1.5e-78 296.6 203 70.0
Lj3g0023171 Lotus japonicus HOM05D005082 ORTHO05D006474 2.5e-78 295.8 198 72.2
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 2.5e-78 295.8 198 71.2
MBI01_g28404_MAGBIO Magnolia biondii HOM05D005082 ORTHO05D006474 5.5e-78 294.7 240 63.8
ECA233G3220 Erigeron canadensis HOM05D005082 ORTHO05D006474 7.2e-78 294.3 198 72.7
vmacro16288 Vaccinium macrocarpon HOM05D005082 ORTHO05D006474 7.2e-78 294.3 260 60.0
DCAR_001519 Daucus carota HOM05D005082 ORTHO05D006474 1.6e-77 293.1 198 70.7
Lsat_1_v5_gn_8_119500 Lactuca sativa HOM05D005082 ORTHO05D006474 2.7e-77 292.4 198 71.2
Zm00001eb230310 Zea mays HOM05D005082 ORTHO05D006474 2.7e-77 292.4 198 70.7
Medtr8g009900 Medicago truncatula HOM05D005082 ORTHO05D006474 8.0e-77 290.8 198 70.2
Lalb_Chr07g0194811 Lupinus albus HOM05D005082 ORTHO05D006474 1.4e-76 290.0 202 69.3
Lalb_Chr12g0210191 Lupinus albus HOM05D005082 ORTHO05D006474 2.3e-76 289.3 202 69.8
arahy.Tifrunner.gnm1.ann1.44ERQ5 Arachis hypogaea HOM05D005082 ORTHO05D006474 3.0e-76 288.9 198 70.2
Os02g0121000 Oryza sativa ssp. japonica HOM05D005082 ORTHO05D006474 5.2e-76 288.1 198 71.2
arahy.Tifrunner.gnm1.ann1.M18VWQ Arachis hypogaea HOM05D005082 ORTHO05D006474 3.3e-75 285.4 198 69.7
COL.COLO4_03850 Corchorus olitorius HOM05D005082 ORTHO05D006474 5.7e-75 284.6 195 71.8
Sc08g0002050 Simmondsia chinensis HOM05D005082 ORTHO05D006474 9.1e-73 277.3 177 75.1
TPR.G17355 Trifolium pratense HOM05D005082 ORTHO05D006474 3.5e-72 275.4 236 59.7
SEGI_01300 Sequoiadendron giganteum HOM05D005082 ORTHO05D006474 1.0e-68 263.8 203 61.1
AagrBONN_evm.TU.Sc2ySwM_117.3203 Anthoceros agrestis HOM05D005082 ORTHO05D006474 1.2e-67 260.4 198 60.6
Haze_01956 Corylus avellana HOM05D005082 ORTHO05D006474 9.8e-67 257.3 165 75.8
Psat4g215760 Pisum sativum HOM05D005082 ORTHO05D006474 8.3e-66 254.2 198 64.6
Mapoly0005s0181 Marchantia polymorpha HOM05D005082 ORTHO05D006474 2.4e-65 252.7 200 58.5
CBR_g25940 Chara braunii HOM05D005082 ORTHO05D006474 1.2e-61 240.4 197 58.4
Pp3c1_10010 Physcomitrium patens HOM05D005082 ORTHO05D006474 3.6e-61 238.8 199 57.8
SMO134G0063 Selaginella moellendorffii HOM05D005082 ORTHO05D006474 3.7e-58 228.8 200 55.0
Sed0003916 Sechium edule HOM05D005082 ORTHO05D006474 4.1e-57 225.3 146 71.2
CSS0015047 Camellia sinensis var. sinensis HOM05D005082 ORTHO05D006474 8.6e-55 217.6 124 83.1
Cre07.g313700 Chlamydomonas reinhardtii HOM05D005082 ORTHO05D006474 3.4e-51 205.7 197 48.2
Lj9C409G6 Lonicera japonica HOM05D005082 ORTHO05D006474 1.3e-50 203.8 158 69.0
PRCOL_00001874 Prasinoderma coloniale HOM05D005082 ORTHO05D006474 1.3e-50 203.8 198 49.0
MCO11G616 Micromonas commoda HOM05D005082 ORTHO05D006474 1.8e-44 183.3 195 43.1
HPP92_019666 Vanilla planifolia HOM05D005082 ORTHO05D006474 5.8e-43 178.3 124 64.5
QL04p064927 Quercus lobata HOM05D005082 ORTHO05D006474 4.3e-38 162.2 90 81.1
Atru.chr5.3580 Acer truncatum HOM05D005082 ORTHO05D006474 2.1e-37 159.8 90 77.8
FvH4_2g14910 Fragaria vesca HOM05D005082 ORTHO05D006474 2.8e-37 159.5 91 75.8
SGA_v2.0_scaffold104G30258 Striga asiatica HOM05D005082 ORTHO05D006474 3.1e-28 129.4 114 64.0
Lj9C409G5 Lonicera japonica HOM05D005082 ORTHO05D006474 1.4e-20 104.0 51 94.1
CSS0018221 Camellia sinensis var. sinensis HOM05D005082 ORTHO05D006474 1.8e-20 103.6 69 76.8
PGR142G3202 Punica granatum HOM05D005082 ORTHO05D006474 7.6e-19 98.2 66 77.3
PGR004G1860 Punica granatum HOM05D005082 ORTHO05D006474 9.9e-19 97.8 66 77.3
Pp3c2_37890 Physcomitrium patens HOM05D005082 ORTHO05D006474 3.8e-18 95.9 199 34.2
Aa31LG6G3290 Aethionema arabicum HOM05D005082 ORTHO05D006474 8.7e-15 84.7 56 78.6
FAN08G2453 Fragaria x ananassa HOM05D005082 ORTHO05D006474 3.3e-14 82.8 49 83.7
FAN04G1942 Fragaria x ananassa HOM05D005082 ORTHO05D006474 2.8e-13 79.7 157 36.9
Lsat_1_v5_gn_8_156340 Lactuca sativa HOM05D005082 ORTHO05D006474 6.9e-12 75.1 59 52.5
Haze_26742 Corylus avellana HOM05D005082 ORTHO05D006474 9.9e-11 71.2 204 29.9
Aqoxy144s004 Aquilegia oxysepala HOM05D005082 ORTHO05D006474 8.4e-10 68.2 106 34.9
FAN18G1553 Fragaria x ananassa HOM05D005082 ORTHO05D006474 1.9e-09 67.0 72 51.4


User provided reference genes

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