Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 5.4e-279 963.8 516 100.0
Nitab4.5_0002162g0010 Nicotiana tabacum HOM05D005979 ORTHO05D282986 6.1e-129 465.3 265 95.5
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 8.1e-41 172.6 87 85.1
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 1.4e-40 171.8 83 91.6
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 9.0e-40 169.1 93 77.4
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 2.6e-39 167.5 83 88.0
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 2.6e-39 167.5 84 91.7
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 2.6e-39 167.5 83 86.7
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 3.4e-39 167.2 84 91.7
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 7.6e-39 166.0 84 91.7
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 1.3e-38 165.2 83 86.7
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 8.4e-38 162.5 83 85.5
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 1.1e-37 162.2 83 84.3
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 2.4e-37 161.0 83 84.3
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 3.2e-37 160.6 83 83.1
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 3.2e-37 160.6 84 89.3
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 4.2e-37 160.2 83 81.9
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 5.4e-37 159.8 92 76.1
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 5.4e-37 159.8 83 79.5
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 5.4e-37 159.8 83 81.9
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 7.1e-37 159.5 83 81.9
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 1.6e-36 158.3 83 80.7
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 2.1e-36 157.9 83 79.5
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 2.1e-36 157.9 83 79.5
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 2.1e-36 157.9 83 80.7
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 3.5e-36 157.1 83 75.9
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 3.5e-36 157.1 83 79.5
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 3.5e-36 157.1 83 80.7
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 3.5e-36 157.1 83 79.5
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 4.6e-36 156.8 83 83.1
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 4.6e-36 156.8 83 78.3
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 6.0e-36 156.4 92 73.9
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 6.0e-36 156.4 82 81.7
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 6.0e-36 156.4 83 79.5
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 6.0e-36 156.4 83 79.5
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 7.9e-36 156.0 83 79.5
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 1.0e-35 155.6 83 83.1
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 1.0e-35 155.6 83 80.7
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.3e-35 155.2 83 77.1
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 1.8e-35 154.8 84 75.0
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.8e-35 154.8 71 97.2
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 2.3e-35 154.5 83 79.5
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 3.0e-35 154.1 83 80.7
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 3.9e-35 153.7 83 77.1
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 5.1e-35 153.3 83 78.3
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 6.7e-35 152.9 83 75.9
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 8.7e-35 152.5 83 79.5
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 8.7e-35 152.5 89 70.8
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 8.7e-35 152.5 83 77.1
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 8.7e-35 152.5 83 77.1
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 8.7e-35 152.5 83 78.3
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 1.1e-34 152.1 83 77.1
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.1e-34 152.1 83 79.5
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 1.1e-34 152.1 83 77.1
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 1.1e-34 152.1 83 75.9
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 1.5e-34 151.8 83 79.5
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 1.5e-34 151.8 83 74.7
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 1.5e-34 151.8 101 64.4
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 1.9e-34 151.4 101 66.3
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 1.9e-34 151.4 83 72.3
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 1.9e-34 151.4 81 79.0
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 1.9e-34 151.4 83 75.9
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 1.9e-34 151.4 83 78.3
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 3.3e-34 150.6 85 71.8
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 3.3e-34 150.6 83 75.9
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 5.6e-34 149.8 81 76.5
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 7.4e-34 149.4 81 75.3
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 7.4e-34 149.4 83 74.7
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 9.6e-34 149.1 84 75.0
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 9.6e-34 149.1 83 71.1
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 1.3e-33 148.7 83 75.9
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 1.6e-33 148.3 84 73.8
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 1.6e-33 148.3 81 75.3
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 2.1e-33 147.9 83 77.1
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 2.1e-33 147.9 81 74.1
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 2.1e-33 147.9 83 77.1
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 2.8e-33 147.5 81 76.5
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 3.7e-33 147.1 84 72.6
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 3.7e-33 147.1 83 74.7
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 4.8e-33 146.7 83 69.9
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 6.2e-33 146.4 81 72.8
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 6.2e-33 146.4 81 74.1
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 8.1e-33 146.0 81 74.1
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 8.1e-33 146.0 98 69.4
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 1.1e-32 145.6 83 75.9
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 1.1e-32 145.6 83 75.9
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 1.4e-32 145.2 85 70.6
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 2.4e-32 144.4 84 71.4
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 2.4e-32 144.4 90 66.7
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 3.1e-32 144.1 81 76.5
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 3.1e-32 144.1 81 76.5
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 4.0e-32 143.7 83 73.5
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 6.9e-32 142.9 83 73.5
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 6.9e-32 142.9 83 69.9
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 1.2e-31 142.1 83 73.5
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 1.5e-31 141.7 82 75.6
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 2.0e-31 141.4 81 76.5
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 2.6e-31 141.0 118 59.3
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 4.5e-31 140.2 81 75.3
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 2.2e-30 137.9 106 58.5
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 4.9e-30 136.7 82 72.0
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 5.1e-27 126.7 82 64.6
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 1.3e-25 122.1 77 63.6
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 3.8e-22 110.5 78 64.1
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 3.8e-22 110.5 59 78.0
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 5.5e-21 106.7 91 51.6
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 5.5e-21 106.7 59 76.3
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 1.2e-20 105.5 60 70.0
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 1.3e-19 102.1 59 69.5
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 5.1e-19 100.1 81 51.9
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 9.7e-18 95.9 72 59.7
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 1.3e-17 95.5 69 72.5
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 1.2e-15 89.0 46 78.3
Nitab4.5_0013762g0010 Nicotiana tabacum HOM05D000065 ORTHO05D000162 4.5e-15 87.0 365 29.0
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 2.2e-14 84.7 56 60.7
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 1.8e-11 75.1 99 40.4
Nitab4.5_0000724g0030 Nicotiana tabacum HOM05D011506 ORTHO05D285897 2.0e-10 71.6 243 28.8
Nitab4.5_0006521g0010 Nicotiana tabacum HOM05D015872 ORTHO05D286564 2.0e-10 71.6 58 62.1
Nitab4.5_0000950g0020 Nicotiana tabacum HOM05D011440 ORTHO05D285860 9.7e-10 69.3 124 37.9
Cfa025444 Carpinus fangiana HOM05D005979 ORTHO05D122864 2.8e-09 67.8 76 44.7
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 1.1e-08 65.9 43 67.4
Nitab4.5_0007736g0010 Nicotiana tabacum HOM05D015872 ORTHO05D282499 1.8e-08 65.1 76 51.3
Nitab4.5_0000825g0050 Nicotiana tabacum HOM05D015872 ORTHO05D283394 2.4e-08 64.7 335 29.0
Nitab4.5_0026546g0010 Nicotiana tabacum HOM05D015872 ORTHO05D285269 9.1e-08 62.8 43 69.8
Nitab4.5_0011824g0010 Nicotiana tabacum HOM05D014506 ORTHO05D017765 2.0e-07 61.6 84 47.6
Nitab4.5_0000577g0050 Nicotiana tabacum HOM05D015872 ORTHO05D283936 2.6e-07 61.2 76 48.7
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 2.2e-06 58.2 59 49.2
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 2.9e-06 57.8 76 40.8
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 3.8e-06 57.4 74 47.3
PRCOL_00006618 Prasinoderma coloniale HOM05D000738 ORTHO05D000675 5.0e-06 57.0 70 37.1
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 6.5e-06 56.6 72 44.4
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 8.5e-06 56.2 78 43.6
Nitab4.5_0000046g0030 Nicotiana tabacum HOM05D011506 ORTHO05D284456 8.5e-06 56.2 89 41.6
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 8.5e-06 56.2 76 39.5


User provided reference genes

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