Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 4.0e-81 304.7 152 100.0
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 5.9e-64 247.7 126 96.8
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 1.1e-59 233.4 125 90.4
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 1.1e-59 233.4 125 90.4
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 1.5e-59 233.0 123 91.9
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 1.9e-59 232.6 125 90.4
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 9.0e-57 223.8 125 86.4
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 1.2e-56 223.4 125 87.2
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 5.9e-56 221.1 128 85.2
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 2.2e-55 219.2 126 82.5
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 2.9e-55 218.8 130 81.5
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 4.2e-54 214.9 125 83.2
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 5.5e-54 214.5 125 80.0
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 7.2e-54 214.2 125 80.0
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 9.4e-54 213.8 122 83.6
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 1.2e-53 213.4 125 80.0
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 7.9e-53 210.7 125 80.8
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 7.9e-53 210.7 125 78.4
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 7.9e-53 210.7 125 82.4
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 7.9e-53 210.7 125 80.0
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 1.4e-52 209.9 127 77.2
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 1.8e-52 209.5 120 82.5
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 2.3e-52 209.1 125 80.0
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 2.3e-52 209.1 125 80.0
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 3.9e-52 208.4 125 77.6
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 3.9e-52 208.4 125 79.2
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 6.7e-52 207.6 124 86.3
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 6.7e-52 207.6 125 78.4
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 1.1e-51 206.8 128 75.8
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 1.1e-51 206.8 126 78.6
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 2.0e-51 206.1 120 79.2
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 2.6e-51 205.7 123 78.9
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 2.6e-51 205.7 123 78.9
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 2.6e-51 205.7 120 79.2
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 3.3e-51 205.3 125 79.2
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 4.4e-51 204.9 126 76.2
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 7.4e-51 204.1 126 77.8
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 7.4e-51 204.1 125 77.6
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 9.7e-51 203.8 120 77.5
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 1.3e-50 203.4 120 77.5
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 1.7e-50 203.0 125 76.0
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 2.2e-50 202.6 120 76.7
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 2.2e-50 202.6 120 76.7
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 2.2e-50 202.6 120 76.7
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 2.2e-50 202.6 126 77.0
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 2.8e-50 202.2 120 76.7
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 6.3e-50 201.1 123 80.5
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 6.3e-50 201.1 125 76.0
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 8.2e-50 200.7 126 77.8
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 1.4e-49 199.9 120 76.7
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.4e-49 199.9 126 77.0
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 1.4e-49 199.9 126 77.0
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 1.8e-49 199.5 120 75.0
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 1.8e-49 199.5 125 76.8
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 2.4e-49 199.1 120 75.0
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 2.4e-49 199.1 123 78.0
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 2.4e-49 199.1 126 76.2
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 2.4e-49 199.1 125 74.4
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 3.1e-49 198.7 123 78.0
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 3.1e-49 198.7 126 77.0
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 3.1e-49 198.7 126 77.0
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 3.1e-49 198.7 125 75.2
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 5.3e-49 198.0 126 76.2
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 6.9e-49 197.6 123 78.9
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 9.1e-49 197.2 120 75.0
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 9.1e-49 197.2 126 77.0
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 9.1e-49 197.2 125 77.6
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.2e-48 196.8 125 75.2
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 1.2e-48 196.8 125 76.8
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 1.5e-48 196.4 125 72.8
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 1.5e-48 196.4 125 76.0
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 2.0e-48 196.1 120 74.2
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 2.0e-48 196.1 120 74.2
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 2.0e-48 196.1 125 72.8
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 2.6e-48 195.7 125 74.4
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 2.6e-48 195.7 126 74.6
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 2.6e-48 195.7 120 74.2
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 2.6e-48 195.7 125 72.8
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 2.6e-48 195.7 121 75.2
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 3.4e-48 195.3 123 74.8
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 4.5e-48 194.9 125 73.6
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 4.5e-48 194.9 125 73.6
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 1.0e-47 193.7 126 73.8
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 1.7e-47 193.0 127 74.8
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 1.7e-47 193.0 117 76.1
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 3.8e-47 191.8 125 74.4
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 3.8e-47 191.8 125 72.8
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 6.5e-47 191.0 125 74.4
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 1.4e-46 189.9 123 72.4
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 1.9e-46 189.5 125 72.8
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 4.2e-46 188.3 123 70.7
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 4.2e-46 188.3 157 60.5
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 4.2e-46 188.3 123 70.7
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 5.5e-46 188.0 125 71.2
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 2.1e-45 186.0 126 73.8
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 7.9e-45 184.1 125 68.8
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 7.9e-45 184.1 123 70.7
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 1.5e-38 163.3 124 60.5
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 8.0e-37 157.5 121 62.8
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 2.6e-35 152.5 96 74.0
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 3.3e-35 152.1 144 56.9
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 4.4e-35 151.8 92 76.1
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 2.2e-34 149.4 96 71.9
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 1.1e-33 147.1 117 56.4
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 2.2e-31 139.4 117 55.6
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 6.5e-31 137.9 117 53.8
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 3.6e-29 132.1 198 42.9
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 5.2e-28 128.3 81 72.8
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 6.8e-28 127.9 115 54.8
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 2.4e-25 119.4 109 52.3
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 5.9e-24 114.8 83 67.5
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 5.9e-24 114.8 83 67.5
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 5.0e-23 111.7 113 46.9
FAN25G1846 Fragaria x ananassa HOM05D005979 ORTHO05D007848 8.8e-20 100.9 75 66.7
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 3.4e-19 99.0 122 43.4
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 1.0e-15 87.4 50 76.0
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 5.0e-15 85.1 50 74.0
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 5.0e-15 85.1 50 74.0
A01p41990 Brassica napus HOM05D005979 ORTHO05D041676 1.6e-13 80.1 77 53.2
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 8.9e-12 74.3 40 77.5
BolC1t05773H Brassica oleracea HOM05D005979 ORTHO05D007848 2.0e-11 73.2 42 71.4
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 8.3e-10 67.8 37 75.7
BcaC09g47773 Brassica carinata HOM05D005979 ORTHO05D007848 1.8e-09 66.6 38 71.1
BraA01t04267Z Brassica rapa HOM05D005979 ORTHO05D041676 7.0e-09 64.7 37 73.0
SEGI_11603 Sequoiadendron giganteum HOM05D005979 ORTHO05D386967 9.5e-06 54.3 49 55.1


User provided reference genes

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