Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004792g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-80 302.8 150 100.0
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-53 213.0 132 82.6
Nitab4.5_0000068g0470 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.2e-50 203.4 173 65.9
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.6e-50 201.8 141 75.9
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.6e-48 195.7 115 84.3
Nitab4.5_0000002g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.8e-45 184.1 130 71.5
Nitab4.5_0009529g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.2e-39 166.0 105 83.8
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-38 163.3 141 65.2
Nitab4.5_0000074g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.8e-36 156.4 133 60.9
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 9.6e-35 150.6 126 54.8
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-33 147.1 131 64.9
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-33 146.7 114 65.8
Nitab4.5_0007579g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.9e-32 140.6 107 70.1
Solyc07g039615.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 7.9e-29 131.0 114 59.6
Nitab4.5_0009966g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.7e-28 127.5 124 59.7
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 3.7e-26 122.1 128 48.4
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.4e-25 120.2 121 45.5
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 1.2e-24 117.1 124 47.6
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.0e-24 116.3 159 41.5
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 5.8e-24 114.8 119 45.4
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 7.6e-24 114.4 128 46.9
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.8e-23 112.1 98 60.2
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.2e-21 107.1 121 42.1
Nitab4.5_0002227g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.1e-21 106.3 72 76.4
Nitab4.5_0006180g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.0e-21 104.8 145 37.9
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 7.9e-21 104.4 121 40.5
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 7.9e-21 104.4 121 40.5
Nitab4.5_0008563g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.3e-20 103.6 61 80.3
Nitab4.5_0004985g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.3e-20 102.8 136 41.9
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 2.3e-20 102.8 126 40.5
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 1.1e-19 100.5 150 35.3
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 4.3e-19 98.6 127 38.6
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 5.7e-19 98.2 132 37.1
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 2.2e-18 96.3 118 39.8
Phvul.011G145200 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.2e-18 96.3 109 42.2
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 3.7e-18 95.5 117 39.3
Nitab4.5_0006326g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.7e-18 95.5 105 52.4
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 1.1e-17 94.0 125 36.0
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.8e-17 93.2 120 40.0
Nitab4.5_0002100g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.4e-17 92.8 118 38.1
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 5.3e-17 91.7 121 37.2
Peaxi162Scf00109g00210 Petunia axillaris HOM05D002954 ORTHO05D003353 7.6e-16 87.8 122 40.2
Peaxi162Scf00818g00410 Petunia axillaris HOM05D002954 ORTHO05D003353 7.6e-16 87.8 122 40.2
Nitab4.5_0000140g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-15 87.4 70 67.1
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 2.9e-15 85.9 127 37.0
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 5.0e-15 85.1 124 37.9
Peaxi162Scf00603g00522 Petunia axillaris HOM05D002954 ORTHO05D003353 1.1e-14 84.0 122 39.3
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 4.2e-14 82.0 132 31.8
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 7.2e-14 81.3 122 38.5
arahy.Tifrunner.gnm1.ann1.HJ32VC Arachis hypogaea HOM05D002954 ORTHO05D003353 3.6e-13 79.0 97 36.1
arahy.Tifrunner.gnm1.ann1.2IZ9JW Arachis hypogaea HOM05D002954 ORTHO05D003353 3.0e-12 75.9 124 36.3
Nitab4.5_0000416g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.9e-12 75.5 71 57.7
Phvul.001G154901 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 5.1e-12 75.1 117 32.5
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 6.7e-12 74.7 120 31.7
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 1.1e-11 73.9 124 36.3
Peaxi162Scf00005g00443 Petunia axillaris HOM05D002954 ORTHO05D003353 1.5e-11 73.6 100 38.0
Phvul.010G077600 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.5e-11 73.6 82 43.9
Nitab4.5_0000712g0160 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.3e-11 72.0 49 69.4
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 4.3e-11 72.0 127 33.1
arahy.Tifrunner.gnm1.ann1.35BP8C Arachis hypogaea HOM05D009662 ORTHO05D003353 5.7e-11 71.6 123 33.3
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 5.7e-11 71.6 119 36.1
Sopen01g012110 Solanum pennellii HOM05D002954 ORTHO05D003353 7.4e-11 71.2 68 45.6
Lj2g0001970 Lotus japonicus HOM05D003938 ORTHO05D004759 1.3e-10 70.5 122 31.1
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 1.7e-10 70.1 132 28.8
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 1.7e-10 70.1 132 28.8
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 1.7e-10 70.1 92 44.6
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 2.2e-10 69.7 132 28.8
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 2.2e-10 69.7 110 33.6
A09p31580 Brassica napus HOM05D008309 ORTHO05D010308 2.8e-10 69.3 121 32.2
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 2.8e-10 69.3 121 32.2
arahy.Tifrunner.gnm1.ann1.DXNF3X Arachis hypogaea HOM05D002954 ORTHO05D003353 8.2e-10 67.8 129 27.9
AT1G40087 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 5.3e-09 65.1 121 29.8
AT3G30200 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 6.9e-09 64.7 121 29.8
Phvul.008G147600 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 9.1e-09 64.3 75 37.3
Lj2g0004380 Lotus japonicus HOM05D005022 ORTHO05D002200 1.2e-08 63.9 87 35.6
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-08 63.5 112 33.0
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 1.5e-08 63.5 122 28.7
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 3.4e-08 62.4 127 29.1
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 4.5e-08 62.0 127 30.7
arahy.Tifrunner.gnm1.ann1.KMI722 Arachis hypogaea HOM05D009662 ORTHO05D003353 5.9e-08 61.6 63 39.7
Nitab4.5_0003353g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.9e-08 61.6 35 80.0
Lalb_Chr21g0312571 Lupinus albus HOM05D009128 ORTHO05D011389 1.0e-07 60.8 126 27.8
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-07 60.8 133 32.3
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.3e-07 60.5 125 30.4
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 1.7e-07 60.1 125 30.4
Nitab4.5_0001346g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-07 60.1 112 33.0
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-07 60.1 117 33.3
PSO339G6242 Papaver somniferum HOM05D008526 ORTHO05D010380 1.7e-07 60.1 90 34.4
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.2e-07 59.7 128 29.7
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.2e-07 59.7 128 29.7
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.2e-07 59.7 128 29.7
Nitab4.5_0004672g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.8e-07 58.9 57 50.9
arahy.Tifrunner.gnm1.ann1.0Q01G3 Arachis hypogaea HOM05D002954 ORTHO05D003353 5.0e-07 58.5 107 33.6
C02p41170 Brassica napus HOM05D008309 ORTHO05D010308 5.0e-07 58.5 121 28.9
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 5.0e-07 58.5 128 29.7
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 5.0e-07 58.5 127 29.1
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.0e-07 58.5 120 31.7
Nitab4.5_0007501g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.0e-07 58.5 50 64.0
PSO339G2856 Papaver somniferum HOM05D008526 ORTHO05D010380 5.0e-07 58.5 90 33.3
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 5.0e-07 58.5 118 31.4
vmacro00652 Vaccinium macrocarpon HOM05D001309 ORTHO05D000385 5.0e-07 58.5 127 29.1
arahy.Tifrunner.gnm1.ann1.B3S8NN Arachis hypogaea HOM05D002954 ORTHO05D003353 8.5e-07 57.8 68 44.1
Nitab4.5_0006167g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.5e-07 57.8 33 84.8
Peaxi162Scf00039g00318 Petunia axillaris HOM05D002954 ORTHO05D003353 8.5e-07 57.8 135 33.3
Solyc01g010405.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 8.5e-07 57.8 75 38.7
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 1.1e-06 57.4 69 33.3
Nitab4.5_0005139g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-06 57.0 120 32.5
Peaxi162Scf00006g00207 Petunia axillaris HOM05D002954 ORTHO05D003353 1.4e-06 57.0 127 31.5
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 1.4e-06 57.0 122 31.1
Lj1g0000513 Lotus japonicus HOM05D002954 ORTHO05D003353 1.9e-06 56.6 50 50.0
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-06 56.6 117 33.3
arahy.Tifrunner.gnm1.ann1.VWW6CB Arachis hypogaea HOM05D002954 ORTHO05D003353 2.5e-06 56.2 65 46.2
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 3.2e-06 55.8 110 31.8
Sopen09g020910 Solanum pennellii HOM05D002954 ORTHO05D003353 3.2e-06 55.8 68 42.6
Nitab4.5_0010215g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.2e-06 55.5 58 46.6
AUR62010149 Chenopodium quinoa HOM05D001385 ORTHO05D004434 5.5e-06 55.1 125 25.6
PSO832G4314 Papaver somniferum HOM05D008526 ORTHO05D010380 5.5e-06 55.1 90 33.3
Phvul.001G118100 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 5.5e-06 55.1 74 35.1
VMungo0464G1180 Vigna mungo HOM05D003555 ORTHO05D004542 5.5e-06 55.1 107 29.9
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 7.2e-06 54.7 125 29.6
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 7.2e-06 54.7 125 29.6
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 7.2e-06 54.7 125 29.6
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.2e-06 54.7 106 32.1
Nitab4.5_0006077g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.2e-06 54.7 119 29.4
Nitab4.5_0006547g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.2e-06 54.7 117 31.6
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 7.2e-06 54.7 94 34.0
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.4e-06 54.3 117 30.8


User provided reference genes

Program Settings