Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 1.6e-272 942.2 488 100.0
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 8.1e-192 674.1 498 73.1
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 7.4e-177 624.4 496 70.8
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 1.3e-120 437.6 383 65.0
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 3.5e-110 402.9 478 50.8
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 2.0e-105 387.1 423 52.5
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 2.9e-104 383.3 514 47.3
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 2.4e-103 380.2 320 66.9
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 2.3e-98 363.6 509 45.4
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.4e-95 354.4 469 46.1
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 3.5e-94 349.7 483 44.9
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 6.0e-94 349.0 232 79.7
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 3.6e-91 339.7 481 43.7
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 3.6e-91 339.7 480 43.3
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 1.1e-90 338.2 475 44.6
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 1.2e-89 334.7 487 43.7
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 4.4e-89 332.8 490 42.7
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 4.4e-89 332.8 484 43.8
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 1.3e-88 331.3 482 43.8
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 1.4e-87 327.8 482 43.8
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 2.1e-86 323.9 432 44.9
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 2.7e-86 323.6 477 45.5
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 2.3e-85 320.5 469 44.6
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 8.7e-85 318.5 471 44.8
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 4.3e-84 316.2 482 41.3
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 4.3e-84 316.2 465 43.0
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 9.6e-84 315.1 493 42.2
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.3e-83 314.7 484 41.5
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 2.1e-83 313.9 506 39.7
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 4.8e-83 312.8 482 42.3
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 9.0e-82 308.5 500 43.2
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 2.6e-81 307.0 471 42.5
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 5.8e-81 305.8 481 42.8
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 9.9e-81 305.1 469 43.5
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 6.4e-80 302.4 430 42.6
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 6.4e-80 302.4 513 39.2
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 6.4e-80 302.4 467 42.8
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 8.4e-80 302.0 480 41.5
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 2.4e-79 300.4 501 39.5
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 5.4e-79 299.3 489 43.4
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 6.0e-78 295.8 471 39.9
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 8.1e-75 285.4 471 39.1
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 4.0e-74 283.1 381 44.6
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 2.6e-73 280.4 482 37.8
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 5.8e-73 279.3 470 38.5
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 2.2e-72 277.3 480 40.0
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 3.8e-72 276.6 471 38.0
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 6.4e-72 275.8 476 38.0
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 1.9e-71 274.2 473 38.5
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 2.4e-71 273.9 475 37.5
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 5.5e-71 272.7 478 39.1
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 6.0e-70 269.2 474 38.4
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 6.0e-70 269.2 457 37.6
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 7.9e-70 268.9 473 39.7
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 1.1e-68 265.0 324 49.4
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 1.1e-68 265.0 471 37.8
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 1.1e-68 265.0 486 37.4
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 5.6e-68 262.7 515 37.5
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 7.4e-68 262.3 499 36.9
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 1.6e-67 261.2 470 37.4
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 6.2e-67 259.2 486 38.5
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 8.1e-67 258.8 470 37.2
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 1.8e-66 257.7 376 43.1
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 3.8e-64 250.0 360 42.8
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 1.3e-61 241.5 353 43.6
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 5.1e-61 239.6 485 37.1
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 9.6e-60 235.3 362 42.8
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 1.6e-59 234.6 330 44.5
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 1.5e-57 228.0 455 34.7
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 5.9e-57 226.1 478 36.4
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 1.9e-55 221.1 470 35.3
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.2e-54 218.4 325 42.5
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 1.1e-52 211.8 358 40.5
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 1.1e-52 211.8 336 41.4
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 1.5e-52 211.5 506 33.6
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 3.3e-52 210.3 484 33.3
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 2.4e-50 204.1 482 33.8
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.5e-49 201.4 547 32.2
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 1.2e-46 191.8 353 38.8
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 7.9e-46 189.1 214 50.9
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 2.0e-44 184.5 235 45.5
Migut.E00617 Erythranthe guttata HOM05D006564 ORTHO05D007772 3.8e-40 170.2 232 43.1
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 2.6e-33 147.5 138 60.1
Lj3A1053G47 Lonicera japonica HOM05D006564 ORTHO05D007772 1.5e-31 141.7 170 45.3
Glyma.02G035501 Glycine max HOM05D006564 ORTHO05D007772 3.2e-31 140.6 202 41.6
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 1.2e-30 138.7 135 55.6
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 4.7e-30 136.7 251 36.3
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 8.8e-29 132.5 387 30.2
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 2.0e-28 131.3 135 53.3
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 9.7e-28 129.0 115 57.4
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 4.8e-27 126.7 168 42.9
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 1.0e-24 119.0 151 45.7
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.7e-24 118.2 135 50.4
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 1.0e-21 109.0 202 37.6
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 1.4e-21 108.6 118 55.9
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 3.7e-19 100.5 160 41.2
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 6.3e-19 99.8 414 27.5
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 1.8e-18 98.2 98 51.0
HanXRQChr12g0383581 Helianthus annuus HOM05D006564 ORTHO05D007772 1.3e-16 92.0 136 37.5
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 3.6e-14 84.0 121 40.5
SHI17545 Sapria himalayana HOM05D006564 ORTHO05D007772 2.3e-13 81.3 105 42.9
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 5.2e-13 80.1 124 37.1
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 5.7e-12 76.6 96 45.8
Pp3c7_26620 Physcomitrium patens HOM05D006564 ORTHO05D007772 2.4e-10 71.2 484 20.7
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 2.7e-09 67.8 84 46.4
HanXRQChr12g0383591 Helianthus annuus HOM05D006564 ORTHO05D007772 1.3e-08 65.5 88 45.5
Os06g0708200 Oryza sativa ssp. japonica HOM05D006564 ORTHO05D007772 2.3e-08 64.7 109 38.5
AagrBONN_evm.TU.Sc2ySwM_362.2494 Anthoceros agrestis HOM05D006564 ORTHO05D007772 5.0e-08 63.5 350 20.9
SEGI_21655 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 1.1e-07 62.4 163 27.0
Migut.E00618 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.5e-07 62.0 78 46.2
CBR_g8804 Chara braunii HOM05D006564 ORTHO05D007772 1.6e-06 58.5 205 24.9
Gohir.D06G182100 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.6e-06 58.5 62 48.4


User provided reference genes

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