Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 5.0e-145 517.7 253 100.0
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 7.6e-109 397.5 261 79.3
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 5.9e-85 318.2 310 57.1
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 1.4e-73 280.4 296 54.4
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 2.6e-72 276.2 258 57.4
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 1.5e-59 233.8 248 51.6
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 1.9e-59 233.4 202 55.4
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 3.2e-59 232.6 255 50.2
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 4.2e-59 232.3 228 52.6
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 7.2e-59 231.5 242 50.0
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 1.2e-58 230.7 244 52.5
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 3.6e-58 229.2 228 51.8
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 6.1e-58 228.4 232 50.4
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 6.1e-58 228.4 248 50.0
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 1.0e-57 227.6 299 44.1
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 3.0e-57 226.1 258 49.2
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 5.7e-56 221.9 258 47.7
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 3.7e-55 219.2 265 45.3
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 6.3e-55 218.4 248 50.0
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 8.3e-55 218.0 241 47.7
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 5.4e-54 215.3 308 42.5
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 7.0e-54 214.9 247 45.7
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 9.1e-54 214.5 232 50.4
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 9.1e-54 214.5 265 44.2
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 9.1e-54 214.5 235 49.8
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 2.0e-53 213.4 227 49.3
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 3.5e-53 212.6 229 49.3
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 4.5e-53 212.2 231 48.9
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 1.0e-52 211.1 241 47.3
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 1.7e-52 210.3 265 43.4
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 2.9e-52 209.5 232 47.4
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 2.9e-52 209.5 208 51.0
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 5.0e-52 208.8 241 46.5
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 1.9e-51 206.8 231 48.5
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 2.5e-51 206.5 275 44.7
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 4.2e-51 205.7 255 44.3
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 4.2e-51 205.7 243 45.7
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 4.2e-51 205.7 243 45.7
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 4.2e-51 205.7 243 45.7
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 4.2e-51 205.7 234 49.1
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 7.2e-51 204.9 228 47.8
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 9.5e-51 204.5 307 40.1
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 9.5e-51 204.5 266 44.7
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 9.5e-51 204.5 263 41.4
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 1.6e-50 203.8 236 46.6
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 1.6e-50 203.8 227 48.5
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 2.8e-50 203.0 284 43.7
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 2.8e-50 203.0 278 45.0
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 3.6e-50 202.6 239 46.4
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 4.7e-50 202.2 228 46.9
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 1.0e-49 201.1 279 41.6
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.8e-49 200.3 307 39.7
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 1.8e-49 200.3 317 41.6
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 3.0e-49 199.5 231 47.2
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 3.0e-49 199.5 231 46.3
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 6.8e-49 198.4 316 41.8
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 2.6e-48 196.4 252 44.0
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 3.4e-48 196.1 361 37.1
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 7.5e-48 194.9 232 46.6
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 9.8e-48 194.5 286 42.7
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 1.3e-47 194.1 306 39.2
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 3.7e-47 192.6 256 43.8
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.1e-46 191.0 228 46.1
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 1.8e-46 190.3 236 43.6
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 5.4e-46 188.7 193 50.8
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 9.2e-46 188.0 233 44.2
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 1.2e-45 187.6 315 38.7
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 1.6e-45 187.2 222 46.4
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 1.6e-45 187.2 222 46.4
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 1.6e-45 187.2 176 56.2
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 2.7e-45 186.4 227 47.1
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 7.8e-45 184.9 229 44.5
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 1.0e-44 184.5 220 45.9
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 1.3e-44 184.1 272 42.6
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 1.3e-44 184.1 223 45.7
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 1.7e-44 183.7 255 43.1
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 2.3e-44 183.3 189 50.8
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 1.9e-43 180.3 314 39.5
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 4.3e-43 179.1 172 55.8
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 7.3e-43 178.3 273 40.3
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 4.7e-42 175.6 245 42.0
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 6.1e-42 175.3 251 41.8
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 3.0e-41 172.9 188 49.5
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 4.0e-41 172.6 235 43.4
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 6.8e-41 171.8 281 40.6
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.2e-40 171.0 278 37.1
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.3e-39 167.5 230 43.0
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 3.7e-39 166.0 270 38.9
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 8.3e-39 164.9 245 40.8
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 1.8e-38 163.7 244 42.2
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 5.4e-38 162.2 228 40.8
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 4.6e-37 159.1 176 47.2
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 5.0e-36 155.6 308 38.3
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 8.6e-36 154.8 139 59.0
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 8.6e-36 154.8 195 43.1
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.2e-34 151.0 162 48.1
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 8.9e-33 144.8 271 34.7
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 2.9e-31 139.8 275 31.6
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 3.7e-31 139.4 228 40.8
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 6.4e-31 138.7 214 41.6
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 1.4e-30 137.5 156 47.4
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 3.2e-30 136.3 283 35.0
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 3.5e-29 132.9 240 31.7
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 3.9e-28 129.4 114 55.3
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 1.1e-27 127.9 228 35.1
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 3.2e-22 109.8 183 38.3
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.2e-21 107.8 106 49.1
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.5e-19 100.9 122 45.1
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 3.6e-18 96.3 234 27.8
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 1.4e-17 94.4 144 41.0
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.2e-16 91.3 126 41.3
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 1.4e-14 84.3 95 46.3
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 1.9e-14 84.0 115 37.4
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 7.1e-14 82.0 205 27.3
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 6.9e-09 65.5 192 27.1
Medtr7g047660 Medicago truncatula HOM05D052963 ORTHO05D007970 9.0e-09 65.1 48 62.5
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 1.5e-08 64.3 143 32.9
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 2.0e-08 63.9 99 39.4
MD10G1313900 Malus domestica HOM05D006314 ORTHO05D030082 6.4e-07 58.9 49 51.0
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 1.1e-06 58.2 48 47.9
QL08p032503 Quercus lobata HOM05D006314 ORTHO05D030082 2.4e-06 57.0 54 44.4


User provided reference genes

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