Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 5.3e-62 242.3 328 100.0
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 4.5e-61 239.2 328 99.4
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 6.7e-57 225.3 329 90.3
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 6.9e-54 215.3 329 89.7
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 5.9e-53 212.2 329 90.0
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 5.9e-53 212.2 329 89.7
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 2.8e-47 193.4 318 89.3
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 3.6e-42 176.4 325 81.5
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 1.0e-41 174.9 320 80.0
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 1.4e-41 174.5 325 69.8
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 6.7e-41 172.2 328 81.1
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 6.3e-39 165.6 321 83.2
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 1.4e-38 164.5 328 79.0
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 1.8e-38 164.1 324 63.9
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 1.8e-38 164.1 323 81.7
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 2.4e-38 163.7 328 79.3
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 9.1e-38 161.8 326 79.8
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 1.6e-37 161.0 322 77.0
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 3.5e-37 159.8 326 79.8
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 7.7e-37 158.7 323 79.9
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.0e-36 158.3 329 79.6
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.0e-36 158.3 329 79.9
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 1.7e-36 157.5 328 79.6
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 2.2e-36 157.1 323 77.1
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 2.9e-36 156.8 326 79.4
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 3.8e-36 156.4 328 78.4
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 1.1e-35 154.8 328 79.6
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 1.5e-35 154.5 328 78.0
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 2.5e-35 153.7 327 77.1
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 3.2e-35 153.3 328 80.2
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 3.2e-35 153.3 329 78.7
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 4.2e-35 152.9 328 75.0
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 4.2e-35 152.9 328 76.5
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 7.2e-35 152.1 329 79.0
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 7.2e-35 152.1 329 79.0
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 1.2e-34 151.4 328 80.5
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 2.1e-34 150.6 319 77.7
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 2.1e-34 150.6 329 77.8
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 2.1e-34 150.6 328 71.3
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 2.7e-34 150.2 327 81.0
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 3.6e-34 149.8 323 75.5
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 4.7e-34 149.4 328 79.3
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 6.1e-34 149.1 329 77.5
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 6.1e-34 149.1 328 74.7
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 1.0e-33 148.3 327 76.8
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 1.0e-33 148.3 327 75.5
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 1.4e-33 147.9 329 79.3
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 1.4e-33 147.9 326 75.8
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 1.8e-33 147.5 316 80.4
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 1.8e-33 147.5 329 74.5
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 1.8e-33 147.5 328 73.8
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 2.3e-33 147.1 327 75.8
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 5.2e-33 146.0 329 79.0
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 6.8e-33 145.6 319 74.9
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 1.2e-32 144.8 326 77.0
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 1.2e-32 144.8 316 79.7
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 2.0e-32 144.1 325 75.7
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 2.0e-32 144.1 323 78.6
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 3.4e-32 143.3 329 75.7
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 3.4e-32 143.3 329 75.7
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 9.8e-32 141.7 328 69.5
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 2.2e-31 140.6 328 71.6
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 2.2e-31 140.6 321 76.9
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 4.8e-31 139.4 327 74.0
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 6.3e-31 139.0 325 75.4
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 6.3e-31 139.0 326 77.6
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 8.3e-31 138.7 327 75.8
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 8.3e-31 138.7 328 68.6
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 4.1e-30 136.3 88 73.9
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 5.4e-30 136.0 326 77.3
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 5.4e-30 136.0 326 75.8
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 1.6e-29 134.4 312 81.7
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 1.6e-29 134.4 324 71.9
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 1.3e-28 131.3 86 70.9
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.8e-28 129.8 80 80.0
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 6.5e-28 129.0 324 68.8
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 8.5e-28 128.6 86 67.4
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 1.1e-27 128.3 326 74.5
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 1.1e-27 128.3 328 67.1
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 2.5e-27 127.1 322 66.1
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 2.5e-27 127.1 327 75.8
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 4.2e-27 126.3 328 68.9
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 5.5e-27 125.9 326 75.5
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 2.1e-26 124.0 327 67.0
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 3.6e-26 123.2 323 68.4
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 4.7e-26 122.9 87 66.7
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 6.8e-25 119.0 320 43.8
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 2.0e-24 117.5 322 66.8
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 2.6e-24 117.1 322 73.6
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 3.4e-24 116.7 336 71.7
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 7.5e-24 115.5 319 68.0
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 7.5e-24 115.5 75 65.3
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 2.2e-23 114.0 322 67.7
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 4.9e-23 112.8 86 60.5
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 1.2e-21 108.2 330 68.5
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 1.2e-21 108.2 330 68.5
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 2.7e-21 107.1 329 67.8
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 4.5e-21 106.3 329 67.5
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 4.5e-21 106.3 64 75.0
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 4.5e-21 106.3 64 75.0
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 2.3e-20 104.0 330 67.3
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 3.8e-20 103.2 88 61.4
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 8.0e-18 95.5 297 77.1
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 1.4e-17 94.7 314 51.6
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.0e-16 90.9 57 66.7
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.0e-16 90.9 59 69.5
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 3.4e-16 90.1 57 68.4
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 4.4e-16 89.7 57 66.7
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 3.7e-15 86.7 62 62.9
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.4e-14 84.7 60 60.0
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 1.7e-12 77.8 58 58.6
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 1.2e-10 71.6 90 42.2
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 4.7e-10 69.7 74 44.6
vmacro17002 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.2e-08 65.1 88 44.3
Actinidia20590 Actinidia chinensis HOM05D006835 ORTHO05D008587 4.4e-08 63.2 40 67.5
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 2.9e-07 60.5 59 47.5
vmacro17159 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.1e-06 58.5 42 59.5
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 1.4e-06 58.2 58 44.8
Cc07_g21430 Coffea canephora HOM05D005956 ORTHO05D007197 3.2e-06 57.0 59 40.7
FvH4_6g36600 Fragaria vesca HOM05D005956 ORTHO05D007197 4.1e-06 56.6 58 43.1
FAN02G1317 Fragaria x ananassa HOM05D005956 ORTHO05D007197 4.1e-06 56.6 58 43.1
FAN14G1696 Fragaria x ananassa HOM05D005956 ORTHO05D007197 4.1e-06 56.6 58 43.1
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 4.1e-06 56.6 42 54.8
Pp3c18_18510 Physcomitrium patens HOM05D005956 ORTHO05D007197 5.4e-06 56.2 59 40.7


User provided reference genes

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