Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 1.6e-177 625.9 306 100.0
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 1.1e-159 566.6 314 89.2
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 7.8e-124 447.6 302 74.5
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 2.3e-123 446.0 310 72.3
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 9.8e-119 430.6 311 68.8
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 6.4e-118 427.9 311 68.2
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 1.7e-99 366.7 267 65.5
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 3.9e-99 365.5 199 86.9
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 5.1e-99 365.2 258 69.4
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 2.5e-98 362.8 273 65.2
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 3.6e-97 359.0 258 65.9
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 3.6e-97 359.0 258 65.9
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 3.6e-97 359.0 258 65.9
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 8.1e-97 357.8 277 62.5
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 1.1e-96 357.5 271 64.6
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 1.4e-96 357.1 202 78.2
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 1.4e-96 357.1 263 65.4
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 1.8e-96 356.7 252 66.3
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 4.0e-96 355.5 199 79.4
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 6.8e-96 354.8 253 66.8
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 6.8e-96 354.8 262 64.1
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 8.9e-96 354.4 273 62.6
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 8.9e-96 354.4 252 66.3
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 8.9e-96 354.4 262 63.7
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 8.9e-96 354.4 254 66.1
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 8.9e-96 354.4 256 66.8
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 8.9e-96 354.4 252 65.1
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 1.2e-95 354.0 253 65.2
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 2.0e-95 353.2 262 63.7
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.6e-95 352.8 252 66.3
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 3.4e-95 352.4 252 65.9
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 3.4e-95 352.4 252 65.9
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 4.4e-95 352.1 256 66.0
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 4.4e-95 352.1 252 63.9
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 9.9e-95 350.9 258 64.3
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 9.9e-95 350.9 261 64.0
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 9.9e-95 350.9 254 64.6
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 1.3e-94 350.5 253 64.0
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 2.9e-94 349.4 253 66.0
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 2.9e-94 349.4 202 76.7
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 6.4e-94 348.2 251 67.3
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 1.1e-93 347.4 218 73.4
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 1.9e-93 346.7 203 77.3
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 3.2e-93 345.9 240 67.1
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 5.4e-93 345.1 256 64.8
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 7.1e-93 344.7 253 64.4
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 7.1e-93 344.7 253 64.4
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 7.1e-93 344.7 250 64.4
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 1.2e-92 344.0 222 69.4
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 3.5e-92 342.4 301 57.8
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 2.3e-91 339.7 246 65.0
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 2.3e-91 339.7 254 63.8
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 5.1e-91 338.6 227 68.3
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 5.1e-91 338.6 220 70.0
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 8.7e-91 337.8 265 60.0
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 1.1e-90 337.4 211 70.1
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 7.3e-90 334.7 260 61.5
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 9.6e-90 334.3 223 68.2
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 1.6e-89 333.6 256 62.9
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 1.6e-89 333.6 236 64.8
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 2.1e-89 333.2 210 70.0
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 3.6e-89 332.4 257 60.3
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 4.7e-89 332.0 218 67.9
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 4.7e-89 332.0 266 59.8
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 8.1e-89 331.3 271 58.3
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 1.1e-88 330.9 286 57.7
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 1.8e-88 330.1 262 62.2
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 4.0e-88 328.9 225 64.4
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 5.3e-88 328.6 256 62.9
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 9.0e-88 327.8 268 60.1
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 9.0e-88 327.8 209 69.9
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 1.2e-87 327.4 198 73.2
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 1.5e-87 327.0 209 69.4
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 2.6e-87 326.2 256 60.5
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 2.6e-87 326.2 201 71.6
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 3.4e-87 325.9 201 71.1
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 3.4e-87 325.9 239 65.3
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 3.4e-87 325.9 266 59.4
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 4.4e-87 325.5 253 61.7
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 7.6e-87 324.7 253 60.5
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 9.9e-87 324.3 260 59.2
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 2.9e-86 322.8 253 60.9
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 3.8e-86 322.4 261 60.9
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 6.4e-86 321.6 201 70.6
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 6.4e-86 321.6 201 70.6
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 6.4e-86 321.6 201 70.6
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 8.4e-86 321.2 211 69.7
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 1.9e-85 320.1 257 59.9
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 1.9e-85 320.1 198 71.2
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 1.9e-85 320.1 261 60.2
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 2.4e-85 319.7 195 72.3
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 7.1e-85 318.2 250 61.2
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 1.6e-84 317.0 208 68.3
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 6.0e-84 315.1 266 59.0
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 5.6e-82 308.5 263 57.4
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 9.6e-82 307.8 191 71.7
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 2.1e-81 306.6 194 70.1
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.1e-80 304.3 249 59.8
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 1.4e-80 303.9 200 66.5
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 2.4e-80 303.1 220 62.7
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 2.4e-80 303.1 204 67.6
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 5.3e-80 302.0 222 62.2
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 9.0e-80 301.2 203 64.0
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 2.6e-79 299.7 201 65.7
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 2.6e-79 299.7 204 64.7
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 2.6e-79 299.7 254 57.1
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 4.5e-79 298.9 255 57.6
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 1.3e-78 297.4 254 56.3
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 3.8e-78 295.8 259 54.8
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 4.2e-77 292.4 247 53.0
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 9.3e-77 291.2 201 62.2
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 1.2e-76 290.8 250 55.6
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 3.5e-76 289.3 225 58.7
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 1.0e-75 287.7 204 65.7
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 1.3e-75 287.3 203 62.1
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.8e-75 287.0 246 55.3
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 3.0e-75 286.2 239 53.6
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 8.7e-75 284.6 253 54.5
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 3.3e-74 282.7 224 60.7
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 7.4e-74 281.6 201 61.2
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 9.6e-74 281.2 201 60.2
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 1.6e-73 280.4 167 73.7
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 2.1e-73 280.0 264 51.5
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 8.1e-73 278.1 175 71.4
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 1.5e-71 273.9 202 60.9
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 2.6e-71 273.1 263 51.7
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 1.7e-70 270.4 214 57.0
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 2.9e-70 269.6 239 51.5
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 3.8e-70 269.2 239 51.5
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 8.4e-70 268.1 222 54.5
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 1.9e-69 266.9 239 51.0
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 3.5e-68 262.7 239 51.0
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 4.6e-68 262.3 202 59.9
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 1.0e-67 261.2 257 52.5
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 1.0e-67 261.2 257 52.5
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 1.0e-67 261.2 257 52.5
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 3.0e-67 259.6 257 52.1
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 3.9e-67 259.2 182 65.4
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 5.7e-66 255.4 257 51.8
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 9.6e-66 254.6 201 58.7
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 1.8e-64 250.4 173 66.5
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 2.6e-63 246.5 221 51.6
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 6.5e-62 241.9 267 49.4
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 6.5e-62 241.9 199 55.3
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 7.1e-61 238.4 179 65.4
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 4.6e-60 235.7 235 50.6
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 6.1e-60 235.3 198 57.1
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 1.8e-59 233.8 229 50.2
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 2.5e-58 229.9 239 49.8
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 1.3e-57 227.6 176 59.7
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 1.6e-57 227.3 200 52.5
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 1.4e-56 224.2 156 64.1
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 5.3e-56 222.2 138 71.7
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 1.2e-55 221.1 241 49.4
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 2.2e-54 216.9 202 50.5
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 8.5e-54 214.9 199 52.3
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 4.2e-53 212.6 200 48.5
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 1.1e-50 204.5 151 62.9
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 2.8e-49 199.9 194 48.5
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 1.1e-48 198.0 194 46.4
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 1.4e-48 197.6 205 47.3
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 2.4e-48 196.8 169 52.1
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 5.3e-48 195.7 228 46.1
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 6.5e-46 188.7 232 41.8
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 4.7e-44 182.6 208 46.6
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 1.4e-40 171.0 287 35.2
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 1.2e-39 167.9 113 68.1
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 2.0e-39 167.2 101 73.3
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 8.5e-38 161.8 189 41.8
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 3.2e-37 159.8 122 61.5
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 1.5e-34 151.0 216 38.4
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 2.0e-31 140.6 87 66.7
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 3.8e-22 109.8 72 63.9
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 3.7e-17 93.2 49 81.6
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 1.4e-16 91.3 73 57.5
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 7.2e-13 79.0 74 50.0
BcaC09g50623 Brassica carinata HOM05D003931 ORTHO05D004577 1.6e-12 77.8 62 59.7


User provided reference genes

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