Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 0.0e+00 1449.1 721 100.0
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 0.0e+00 1253.0 732 86.3
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 0.0e+00 1250.0 738 86.2
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 0.0e+00 1247.6 737 86.2
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 0.0e+00 1244.2 738 85.9
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 0.0e+00 1237.6 736 85.1
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 0.0e+00 1204.1 691 88.6
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 0.0e+00 1102.8 736 75.0
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 0.0e+00 1098.2 736 73.9
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 0.0e+00 1076.6 736 72.6
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 4.9e-312 1074.7 724 74.0
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 4.9e-312 1073.9 736 73.4
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 1.5e-311 1072.4 736 71.1
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 2.2e-310 1068.5 736 71.5
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.8e-309 1065.4 736 72.1
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 3.2e-309 1064.7 736 72.1
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 2.0e-308 1062.0 736 71.6
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 2.0e-308 1062.0 736 72.0
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 3.5e-308 1061.2 736 70.8
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 2.3e-307 1058.5 733 71.6
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 5.0e-307 1057.4 735 70.9
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 8.6e-307 1056.6 736 70.8
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 4.3e-306 1054.3 729 71.3
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 1.2e-305 1052.7 724 73.5
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 2.8e-305 1051.6 728 71.0
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 3.1e-304 1048.1 724 70.7
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 4.0e-304 1047.7 736 70.4
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 8.9e-304 1046.6 730 70.7
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 3.4e-303 1044.6 724 71.8
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 5.8e-303 1043.9 730 71.0
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 5.8e-303 1043.9 730 71.2
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 7.5e-303 1043.5 730 71.0
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 7.5e-303 1043.5 736 70.2
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 1.7e-302 1042.3 738 69.4
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 8.3e-302 1040.0 722 72.2
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 3.2e-301 1038.1 724 70.2
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 9.2e-301 1036.6 736 70.1
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 1.6e-300 1035.8 724 70.2
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 1.0e-299 1033.1 736 69.7
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 1.6e-297 1025.8 736 69.3
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 4.7e-297 1024.2 728 70.1
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 6.2e-297 1023.8 737 69.2
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 2.3e-296 1021.9 736 69.3
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 7.6e-295 1016.9 721 69.6
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 1.3e-294 1016.1 716 71.1
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 2.2e-294 1015.4 730 68.9
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 1.4e-293 1012.7 770 66.8
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 4.6e-292 1007.7 729 68.7
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 6.0e-292 1007.3 741 69.1
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 1.0e-291 1006.5 741 68.3
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 1.7e-291 1005.7 811 64.2
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 6.6e-291 1003.8 735 68.6
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 8.6e-291 1003.4 730 69.2
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 5.6e-290 1000.7 734 68.7
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 2.1e-289 998.8 728 67.4
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 3.6e-289 998.0 737 67.4
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 8.1e-289 996.9 738 68.3
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 2.4e-288 995.3 724 69.9
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 2.6e-287 991.9 720 69.4
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 3.4e-287 991.5 728 67.6
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 5.8e-287 990.7 728 68.7
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 1.3e-286 989.6 741 67.9
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 1.7e-286 989.2 734 67.4
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 8.4e-286 986.9 727 67.1
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 1.9e-285 985.7 728 67.4
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 3.2e-285 984.9 724 69.1
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 2.5e-282 975.3 736 66.4
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 1.3e-281 973.0 736 66.4
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 7.6e-279 963.8 716 66.6
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 9.9e-279 963.4 716 67.5
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 3.2e-277 958.4 718 67.0
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 7.1e-277 957.2 718 67.0
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 9.3e-277 956.8 714 66.5
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 1.2e-276 956.4 718 66.7
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 1.6e-276 956.1 715 67.4
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 1.6e-276 956.1 726 66.5
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 6.6e-275 950.7 714 67.1
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 8.7e-275 950.3 712 65.9
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 1.1e-274 949.9 738 65.7
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 3.3e-274 948.3 719 66.6
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 1.6e-273 946.0 715 66.9
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 9.9e-271 936.8 719 66.3
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 3.8e-270 934.9 716 65.6
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 6.4e-270 934.1 807 59.1
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 3.0e-267 925.2 772 61.3
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 1.6e-260 902.9 730 62.2
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 1.0e-259 900.2 724 63.8
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 8.4e-254 880.6 740 60.9
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 1.1e-253 880.2 728 63.2
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 5.5e-253 877.9 710 63.8
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 1.6e-249 866.3 616 69.0
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 4.8e-249 864.8 607 71.0
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 2.6e-247 859.0 737 61.3
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 6.5e-246 854.4 697 62.8
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 1.1e-245 853.6 584 71.9
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 7.4e-234 814.3 730 58.4
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 9.4e-221 770.8 557 69.1
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 5.7e-218 761.5 540 69.4
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 1.7e-206 723.4 719 52.6
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.1e-200 704.1 748 54.1
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 4.6e-199 698.7 718 50.8
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 9.5e-181 637.9 718 48.2
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 7.6e-178 628.2 886 41.9
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 1.7e-177 627.1 454 67.4
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 2.7e-167 593.2 854 41.6
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 1.5e-157 560.8 711 45.0
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 8.7e-150 535.0 516 54.3
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 4.5e-146 522.7 410 62.7
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 4.9e-145 519.2 730 42.6
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 5.7e-141 505.8 752 41.1
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 1.5e-130 471.1 769 39.3
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 1.9e-128 464.2 716 38.7
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 1.0e-121 441.8 336 69.9
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 3.8e-121 439.9 813 35.5
CDE08G0418 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 4.5e-114 416.4 303 69.6
Zm00001eb358160 Zea mays HOM05D005873 ORTHO05D007582 5.5e-104 382.9 347 58.2
SHI28554 Sapria himalayana HOM05D005873 ORTHO05D007582 9.8e-77 292.4 270 56.3
CDE08G0836 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 8.9e-70 269.2 174 72.4
unitig_0.g713 Utricularia gibba HOM05D005873 ORTHO05D007582 1.2e-66 258.8 188 69.7
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 4.7e-55 220.3 132 79.5
CDE02G2814 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 5.8e-53 213.4 137 71.5
Haze_06244 Corylus avellana HOM05D005873 ORTHO05D007582 2.5e-40 171.4 113 73.5
SHI28555 Sapria himalayana HOM05D005873 ORTHO05D007582 1.8e-38 165.2 102 78.4
Psat0s133g0080 Pisum sativum HOM05D005873 ORTHO05D007582 2.1e-34 151.8 213 45.5
SHI28562 Sapria himalayana HOM05D005873 ORTHO05D007582 3.1e-30 137.9 112 56.2
Potri.011G065402 Populus trichocarpa HOM05D005873 ORTHO05D007582 1.2e-26 125.9 96 65.6
Sabra11G0047200 Salix brachista HOM05D005873 ORTHO05D007582 3.1e-22 111.3 61 85.2
Lsat_1_v5_gn_1_96960 Lactuca sativa HOM05D001670 ORTHO05D002980 7.6e-21 106.7 149 45.6
SHI28558 Sapria himalayana HOM05D005873 ORTHO05D050808 2.5e-19 101.7 121 42.1
Lsat_1_v5_gn_9_10320 Lactuca sativa HOM05D001670 ORTHO05D002980 2.5e-16 91.7 81 58.0
Oeu041773.1 Olea europaea HOM05D005873 ORTHO05D042378 9.1e-14 83.2 63 63.5
Lsat_1_v5_gn_4_5981 Lactuca sativa HOM05D005873 ORTHO05D002980 5.9e-13 80.5 59 64.4
Cpa.g.c47463 Carica papaya HOM05D005873 ORTHO05D007582 1.4e-11 75.9 45 77.8
A06p46270 Brassica napus HOM05D005873 ORTHO05D042378 2.5e-11 75.1 46 69.6
CAN.G1017.2 Capsicum annuum HOM05D009823 ORTHO05D011888 3.3e-08 64.7 58 65.5
RcHm_v2.0_Chr2g0132441 Rosa chinensis HOM05D005873 ORTHO05D007582 5.7e-08 63.9 38 76.3
CAN.G734.4 Capsicum annuum HOM05D009823 ORTHO05D011888 1.3e-07 62.8 59 61.0


User provided reference genes

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