Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003886g0090 Nicotiana tabacum HOM05D005539 ORTHO05D006644 2.8e-109 398.7 211 100.0
Nitab4.5_0001171g0030 Nicotiana tabacum HOM05D005539 ORTHO05D006644 5.2e-95 351.3 193 97.4
CAN.G1694.1 Capsicum annuum HOM05D005539 ORTHO05D006644 7.6e-78 294.3 173 91.3
Sopen11g010350 Solanum pennellii HOM05D005539 ORTHO05D006644 9.9e-70 267.3 171 85.4
Peaxi162Scf00825g00123 Petunia axillaris HOM05D005539 ORTHO05D006644 1.7e-69 266.5 167 86.8
Solyc11g020190.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 4.9e-69 265.0 171 85.4
Solyc11g008120.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 6.4e-69 264.6 171 84.8
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 5.6e-57 224.9 173 70.5
Dinv17986 Davidia involucrata HOM05D005539 ORTHO05D006644 2.7e-51 206.1 168 66.7
Lj8A68G37 Lonicera japonica HOM05D005539 ORTHO05D006644 1.3e-50 203.8 168 64.3
MSTRG.8325 Avicennia marina HOM05D005539 ORTHO05D006644 1.8e-50 203.4 171 64.3
Actinidia33928 Actinidia chinensis HOM05D005539 ORTHO05D006644 5.1e-50 201.8 168 65.5
Actinidia29697 Actinidia chinensis HOM05D005539 ORTHO05D006644 1.1e-49 200.7 171 64.9
TAR369G0030 Trochodendron aralioides HOM05D005539 ORTHO05D006644 3.3e-49 199.1 168 64.9
Rhsim09G0176800 Rhododendron simsii HOM05D005539 ORTHO05D006644 9.6e-49 197.6 168 64.9
CSS0043358 Camellia sinensis var. sinensis HOM05D005539 ORTHO05D006644 1.3e-48 197.2 168 63.7
Cc02_g06620 Coffea canephora HOM05D005539 ORTHO05D006644 1.6e-48 196.8 172 64.5
vmacro10051 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 2.8e-48 196.1 168 63.7
vmacro10050 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 8.2e-48 194.5 164 64.6
Lsat_1_v5_gn_2_122921 Lactuca sativa HOM05D005539 ORTHO05D006644 2.4e-47 193.0 168 59.5
Oeu064386.1 Olea europaea HOM05D005539 ORTHO05D006644 2.4e-47 193.0 169 66.3
GSVIVG01032835001 Vitis vinifera HOM05D005539 ORTHO05D006644 3.1e-47 192.6 168 64.9
Duzib106G1755 Durio zibethinus HOM05D005539 ORTHO05D006644 9.0e-47 191.0 168 61.9
HanXRQChr14g0459831 Helianthus annuus HOM05D005539 ORTHO05D006644 5.8e-46 188.3 168 60.1
ECA238G2434 Erigeron canadensis HOM05D005539 ORTHO05D006644 1.0e-45 187.6 168 59.5
Prupe.2G249200 Prunus persica HOM05D005539 ORTHO05D006644 5.0e-45 185.3 173 60.7
HanXRQChr13g0392111 Helianthus annuus HOM05D005539 ORTHO05D006644 8.4e-45 184.5 168 57.7
MD01G1152200 Malus domestica HOM05D005539 ORTHO05D006644 1.9e-44 183.3 170 61.8
Manes.10G013600 Manihot esculenta HOM05D005539 ORTHO05D006644 4.2e-44 182.2 168 59.5
CANSAT56G2522 Cannabis sativa HOM05D005539 ORTHO05D006644 2.1e-43 179.9 207 50.2
Ciclev10030725m.g Citrus clementina HOM05D005539 ORTHO05D006644 2.1e-43 179.9 168 58.9
Nn2g13702 Nelumbo nucifera HOM05D005539 ORTHO05D006644 3.5e-43 179.1 170 56.5
Cpa.g.sc19.181 Carica papaya HOM05D005539 ORTHO05D006644 6.1e-43 178.3 165 57.6
Phvul.001G242300 Phaseolus vulgaris HOM05D005539 ORTHO05D006644 7.9e-43 177.9 168 57.1
RcHm_v2.0_Chr1g0370081 Rosa chinensis HOM05D005539 ORTHO05D006644 1.8e-42 176.8 168 58.9
Gohir.A10G235300 Gossypium hirsutum HOM05D005539 ORTHO05D006644 2.3e-42 176.4 168 57.7
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.0e-42 176.0 168 57.1
Glyma.11G229000 Glycine max HOM05D005539 ORTHO05D006644 3.0e-42 176.0 168 56.5
Hund15944 Selenicereus undatus HOM05D005539 ORTHO05D006644 3.0e-42 176.0 167 56.9
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 5.1e-42 175.3 168 57.1
Gohir.D10G247700 Gossypium hirsutum HOM05D005539 ORTHO05D006644 5.1e-42 175.3 168 57.7
Thecc.10G020000 Theobroma cacao HOM05D005539 ORTHO05D006644 5.1e-42 175.3 168 57.1
Atru.chr12.24 Acer truncatum HOM05D005539 ORTHO05D006644 6.7e-42 174.9 168 58.9
FvH4_7g24380 Fragaria vesca HOM05D005539 ORTHO05D006644 6.7e-42 174.9 168 57.1
FAN06G2075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 6.7e-42 174.9 168 57.1
FAN10G4325 Fragaria x ananassa HOM05D005539 ORTHO05D006644 6.7e-42 174.9 168 57.1
Haze_17219 Corylus avellana HOM05D005539 ORTHO05D006644 8.7e-42 174.5 168 58.3
CiPaw.01G297900 Carya illinoinensis HOM05D005539 ORTHO05D006644 1.9e-41 173.3 168 57.7
VMungo1383G3500 Vigna mungo HOM05D005539 ORTHO05D006644 1.9e-41 173.3 168 57.1
Cfa001325 Carpinus fangiana HOM05D005539 ORTHO05D006644 2.5e-41 172.9 170 57.6
FAN03G1336 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.3e-41 172.6 168 56.5
Eucgr.J00217 Eucalyptus grandis HOM05D005539 ORTHO05D006644 4.3e-41 172.2 168 56.0
Gorai.011G286200 Gossypium raimondii HOM05D005539 ORTHO05D006644 4.3e-41 172.2 168 57.1
Medtr3g070390 Medicago truncatula HOM05D005539 ORTHO05D006644 4.3e-41 172.2 168 56.5
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea HOM05D005539 ORTHO05D006644 7.4e-41 171.4 168 57.1
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea HOM05D005539 ORTHO05D006644 7.4e-41 171.4 168 57.1
COL.COLO4_25704 Corchorus olitorius HOM05D005539 ORTHO05D006644 1.3e-40 170.6 172 55.2
TPR.G2533 Trifolium pratense HOM05D005539 ORTHO05D006644 1.3e-40 170.6 168 56.0
Sed0009998 Sechium edule HOM05D005539 ORTHO05D006644 2.8e-40 169.5 168 53.6
Lalb_Chr15g0084151 Lupinus albus HOM05D005539 ORTHO05D006644 6.3e-40 168.3 171 54.4
ClCG07G004120 Citrullus lanatus HOM05D005539 ORTHO05D006644 8.2e-40 167.9 168 53.0
AUR62022871 Chenopodium quinoa HOM05D005539 ORTHO05D006644 1.8e-39 166.8 172 53.5
Ca_15119_v3 Cicer arietinum L. HOM05D005539 ORTHO05D006644 2.4e-39 166.4 168 55.4
Aqoxy4G02586 Aquilegia oxysepala HOM05D005539 ORTHO05D006644 4.1e-39 165.6 171 50.9
EL10Ac2g04818 Beta vulgaris HOM05D005539 ORTHO05D006644 1.2e-38 164.1 172 53.5
Lj6g0015972 Lotus japonicus HOM05D005539 ORTHO05D006644 1.2e-38 164.1 168 54.2
Psat5g128120 Pisum sativum HOM05D005539 ORTHO05D006644 1.2e-38 164.1 168 57.1
THA.LOC104826852 Tarenaya hassleriana HOM05D005539 ORTHO05D006644 1.2e-38 164.1 169 52.7
CsaV3_5G010080 Cucumis sativus L. HOM05D005539 ORTHO05D006644 1.5e-38 163.7 173 50.9
Potri.008G067600 Populus trichocarpa HOM05D005539 ORTHO05D006644 2.6e-38 162.9 168 54.2
PGR044G2440 Punica granatum HOM05D005539 ORTHO05D006644 4.5e-38 162.2 165 54.5
MELO3C025184.2 Cucumis melo HOM05D005539 ORTHO05D006644 5.9e-38 161.8 173 50.3
Potri.010G189700 Populus trichocarpa HOM05D005539 ORTHO05D006644 5.9e-38 161.8 168 56.0
Sabra10G0146300 Salix brachista HOM05D005539 ORTHO05D006644 5.9e-38 161.8 175 50.9
Ah.04g164520 Amaranthus hybridus HOM05D005539 ORTHO05D006644 7.7e-38 161.4 165 54.5
AUR62012239 Chenopodium quinoa HOM05D005539 ORTHO05D006644 1.3e-37 160.6 172 51.2
BcaC06g32273 Brassica carinata HOM05D005539 ORTHO05D006644 6.5e-37 158.3 171 51.5
AL6G15570 Arabidopsis lyrata HOM05D005539 ORTHO05D006644 1.4e-36 157.1 169 52.1
Migut.F01380 Erythranthe guttata HOM05D005539 ORTHO05D006644 1.4e-36 157.1 172 54.7
A10p30680 Brassica napus HOM05D005539 ORTHO05D006644 2.5e-36 156.4 171 50.9
BraA10t45109Z Brassica rapa HOM05D005539 ORTHO05D006644 2.5e-36 156.4 171 50.9
PSO339G2908 Papaver somniferum HOM05D005539 ORTHO05D006644 4.2e-36 155.6 166 51.8
DCAR_011807 Daucus carota HOM05D005539 ORTHO05D006644 5.5e-36 155.2 168 54.8
AT5G05680 Arabidopsis thaliana HOM05D005539 ORTHO05D006644 2.7e-35 152.9 171 50.9
Carub.0006s0457 Capsella rubella HOM05D005539 ORTHO05D006644 2.7e-35 152.9 169 50.9
Thhalv10012715m.g Eutrema salsugineum HOM05D005539 ORTHO05D006644 3.6e-35 152.5 171 50.9
Aa31LG11G6690 Aethionema arabicum HOM05D005539 ORTHO05D006644 2.3e-34 149.8 168 51.8
unitig_0.g238 Utricularia gibba HOM05D005539 ORTHO05D006644 2.3e-34 149.8 150 56.7
FAN06G5029 Fragaria x ananassa HOM05D005539 ORTHO05D006644 6.7e-34 148.3 170 51.2
BcaC06g32275 Brassica carinata HOM05D005539 ORTHO05D006644 8.8e-34 147.9 170 49.4
BolC9t59878H Brassica oleracea HOM05D005539 ORTHO05D006644 1.5e-33 147.1 170 49.4
C09p71160 Brassica napus HOM05D005539 ORTHO05D006644 2.0e-33 146.7 170 48.8
Sp6g37210 Schrenkiella parvula HOM05D005539 ORTHO05D006644 7.4e-33 144.8 169 48.5
CDE04G1676 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 2.2e-32 143.3 170 47.6
SGA_v2.0_scaffold76G25107 Striga asiatica HOM05D005539 ORTHO05D006644 2.8e-32 142.9 247 39.7
CARHR207600 Cardamine hirsuta HOM05D005539 ORTHO05D006644 1.8e-31 140.2 170 48.2
Sabra08G0049700 Salix brachista HOM05D005539 ORTHO05D006644 6.9e-31 138.3 157 49.0
ATR0193G007 Amborella trichopoda HOM05D005539 ORTHO05D006644 7.7e-30 134.8 172 48.8
Sc14g0005370 Simmondsia chinensis HOM05D005539 ORTHO05D006644 6.5e-29 131.7 137 50.4
HPP92_019887 Vanilla planifolia HOM05D005539 ORTHO05D006644 1.9e-28 130.2 164 46.3
Os04g0608400 Oryza sativa ssp. japonica HOM05D005539 ORTHO05D006644 7.9e-27 124.8 171 43.9
Hma1.2p1_0703F.1_g206540 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 2.3e-26 123.2 86 73.3
Zm00001eb430560 Zea mays HOM05D005539 ORTHO05D006644 1.5e-25 120.6 171 41.5
PSO384G3240 Papaver somniferum HOM05D005539 ORTHO05D006644 2.6e-25 119.8 166 45.2
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.4e-23 114.0 168 43.5
BcaB05g21701 Brassica carinata HOM05D005539 ORTHO05D006644 7.0e-23 111.7 169 40.8
HPP92_019878 Vanilla planifolia HOM05D005539 ORTHO05D006644 3.5e-22 109.4 166 43.4
SEGI_35888 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 1.4e-18 97.4 168 33.3
Sc14g0005420 Simmondsia chinensis HOM05D005539 ORTHO05D006644 8.8e-18 94.7 84 56.0
MD07G1220900 Malus domestica HOM05D005539 ORTHO05D006644 3.8e-13 79.3 65 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2924 Anthoceros agrestis HOM05D005539 ORTHO05D006644 8.3e-08 61.6 168 31.5
Glyma.18G028233 Glycine max HOM05D005539 ORTHO05D006644 3.5e-06 56.2 49 55.1


User provided reference genes

Program Settings