Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 0.0e+00 1145.2 655 100.0
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 0.0e+00 1118.2 655 97.9
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 4.5e-286 987.6 656 88.3
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 3.9e-282 974.5 659 87.3
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 6.5e-277 957.2 659 86.2
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 8.4e-277 956.8 659 86.0
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 2.6e-270 935.3 664 84.6
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 4.2e-236 821.6 657 72.5
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 1.4e-223 780.0 656 68.8
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 1.2e-219 766.9 656 69.1
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 5.2e-218 761.5 659 67.7
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 4.9e-216 755.0 635 69.8
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 2.4e-215 752.7 665 66.8
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 1.2e-214 750.4 662 68.6
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 4.6e-214 748.4 661 67.5
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 3.3e-212 742.3 658 67.8
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 1.6e-211 740.0 661 65.4
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 4.7e-211 738.4 665 66.0
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 1.2e-209 733.8 667 66.6
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 2.0e-209 733.0 669 66.2
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 3.4e-209 732.3 664 64.3
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 3.4e-209 732.3 668 66.3
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 1.3e-208 730.3 662 66.0
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 3.7e-208 728.8 657 64.2
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 1.6e-206 723.4 665 64.4
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 2.7e-206 722.6 661 62.9
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 4.6e-206 721.8 662 64.0
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 1.3e-205 720.3 664 64.3
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 2.5e-204 716.1 659 67.2
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 2.5e-204 716.1 659 67.2
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 4.3e-204 715.3 658 64.0
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 5.6e-204 714.9 661 63.2
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 1.2e-203 713.8 661 64.0
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 8.1e-203 711.1 658 62.2
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 8.1e-203 711.1 667 63.4
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.4e-202 710.3 661 62.9
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 2.3e-202 709.5 663 62.9
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 2.3e-202 709.5 658 62.3
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 5.2e-202 708.4 668 63.5
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 6.8e-202 708.0 657 63.5
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 1.3e-200 703.7 653 63.6
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 3.7e-200 702.2 663 62.6
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 1.1e-199 700.7 609 66.5
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 1.4e-199 700.3 659 62.2
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 1.9e-199 699.9 658 62.5
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.4e-199 699.5 660 65.3
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 2.4e-199 699.5 658 63.8
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 4.1e-199 698.7 609 67.2
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 3.0e-197 692.6 657 62.7
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 3.0e-197 692.6 661 62.2
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 6.6e-197 691.4 677 59.7
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 8.6e-197 691.0 661 61.4
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 1.1e-196 690.6 655 60.0
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 2.5e-196 689.5 668 60.6
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 3.3e-196 689.1 667 60.6
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 7.3e-196 688.0 666 62.0
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 1.6e-195 686.8 666 61.4
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 2.1e-195 686.4 695 63.5
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 2.1e-195 686.4 658 63.5
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 2.8e-195 686.0 658 65.5
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 4.7e-195 685.3 659 65.9
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 2.0e-193 679.9 668 61.7
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 2.9e-192 676.0 656 62.7
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 6.4e-192 674.9 668 61.2
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 3.2e-191 672.5 661 64.3
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 2.7e-190 669.5 538 69.9
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 3.5e-190 669.1 664 64.9
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 1.3e-189 667.2 657 60.9
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 3.0e-189 666.0 657 61.9
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 3.3e-188 662.5 662 58.8
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 1.2e-187 660.6 660 57.6
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 8.1e-187 657.9 662 59.7
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 1.4e-186 657.1 654 58.3
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 6.8e-186 654.8 664 57.4
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 1.2e-185 654.1 656 61.1
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 6.4e-184 648.3 656 57.8
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 6.4e-184 648.3 656 62.3
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 1.4e-183 647.1 660 57.0
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 5.4e-183 645.2 660 57.1
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 1.2e-182 644.0 657 60.4
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 3.5e-182 642.5 665 57.1
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 7.8e-182 641.3 656 57.0
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 6.6e-181 638.3 660 60.0
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 3.3e-180 636.0 658 57.4
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 1.6e-179 633.6 662 62.1
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 1.6e-179 633.6 656 58.5
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 3.6e-179 632.5 661 57.9
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 3.6e-179 632.5 660 57.3
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 3.6e-179 632.5 661 57.9
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 2.4e-178 629.8 654 56.9
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 6.9e-178 628.2 662 58.3
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 9.0e-178 627.9 665 61.8
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.4e-177 625.9 608 60.7
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 1.3e-176 624.0 659 59.6
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 1.3e-176 624.0 662 60.3
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 1.9e-175 620.2 660 59.8
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 1.9e-175 620.2 661 56.9
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 2.4e-175 619.8 657 60.4
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 5.4e-175 618.6 669 58.4
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 9.3e-175 617.8 663 56.0
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.6e-174 617.1 658 56.7
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 3.9e-173 612.5 662 56.8
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 8.7e-173 611.3 660 55.9
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.5e-172 610.5 620 59.5
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 1.5e-172 610.5 663 55.2
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 4.3e-172 609.0 549 63.8
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 4.3e-172 609.0 549 63.8
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 1.3e-171 607.4 661 55.4
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 2.1e-171 606.7 666 61.4
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 6.9e-170 601.7 660 55.0
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 6.9e-170 601.7 602 60.0
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.4e-169 599.4 661 54.9
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 1.7e-168 597.0 605 61.3
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.9e-168 596.3 661 55.1
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 3.5e-166 589.3 670 54.8
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 3.9e-165 585.9 654 55.4
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 1.6e-163 580.5 663 53.5
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 5.3e-162 575.5 663 55.1
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 2.6e-161 573.2 655 55.9
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 4.5e-161 572.4 656 55.3
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.9e-160 568.9 661 52.6
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 8.4e-160 568.2 566 59.4
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 5.5e-159 565.5 659 55.1
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 2.7e-158 563.1 611 57.4
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 6.0e-158 562.0 661 53.1
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 2.3e-157 560.1 665 52.2
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 1.9e-156 557.0 654 51.5
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 2.5e-156 556.6 558 57.5
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 2.1e-155 553.5 666 51.8
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 3.4e-153 546.2 659 54.3
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 4.5e-153 545.8 657 51.6
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 5.0e-152 542.3 667 50.8
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 4.6e-150 535.8 663 51.6
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 6.9e-146 521.9 606 53.1
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 2.9e-144 516.5 505 57.6
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 1.4e-143 514.2 540 57.0
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 3.2e-143 513.1 659 48.9
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 3.6e-142 509.6 618 52.8
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 1.1e-140 504.6 614 51.5
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 2.5e-140 503.4 667 49.9
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 2.8e-139 500.0 642 52.5
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 3.7e-139 499.6 668 50.1
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 5.3e-138 495.7 658 47.9
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 2.0e-137 493.8 684 46.2
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 1.3e-136 491.1 684 47.1
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 5.5e-135 485.7 615 50.2
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea HOM05D003743 ORTHO05D004311 9.4e-135 485.0 588 52.7
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 6.7e-125 452.2 401 69.6
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 4.0e-117 426.4 660 44.7
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 2.0e-116 424.1 613 47.0
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 1.6e-113 414.5 625 46.7
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 1.9e-103 380.9 423 54.4
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 6.8e-101 372.5 402 55.7
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 3.7e-99 366.7 403 55.8
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 9.8e-92 342.0 309 61.2
A03p68920 Brassica napus HOM05D003743 ORTHO05D004311 1.0e-88 332.0 657 39.4
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 3.3e-87 327.0 549 44.1
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 1.5e-84 318.2 671 37.4
Oeu016117.1 Olea europaea HOM05D003743 ORTHO05D004311 1.2e-81 308.5 588 41.8
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.2e-76 292.0 435 44.4
BraSC39t46172Z Brassica rapa HOM05D003743 ORTHO05D004311 1.3e-75 288.5 540 39.3
GSVIVG01006453001 Vitis vinifera HOM05D003743 ORTHO05D004311 1.7e-75 288.1 232 69.8
CBR_g30024 Chara braunii HOM05D003743 ORTHO05D004311 9.0e-61 239.2 632 34.0
Zm00001eb087640 Zea mays HOM05D003743 ORTHO05D004311 7.1e-50 203.0 255 45.5
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 1.2e-33 149.1 113 64.6
MBI04_g35990_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 4.3e-31 140.6 221 46.6
FvH4_6g03622 Fragaria vesca HOM05D003743 ORTHO05D004311 3.7e-30 137.5 78 85.9
EL10Ac4g08952 Beta vulgaris HOM05D003743 ORTHO05D004311 4.2e-26 124.0 156 51.9
Aqoxy3G03215 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.2e-25 122.5 109 56.0
ECA246G3327 Erigeron canadensis HOM05D001482 ORTHO05D001499 3.6e-25 120.9 93 71.0
SGA_v2.0_scaffold49G18283 Striga asiatica HOM05D003743 ORTHO05D004311 1.7e-22 112.1 390 26.4
Rhsim02G0125200 Rhododendron simsii HOM05D003743 ORTHO05D004311 1.7e-19 102.1 61 73.8
Aqoxy3G03214 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 3.2e-18 97.8 78 70.5
Aqoxy3G03213 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 7.2e-18 96.7 74 63.5
Nitab4.5_0000556g0130 Nicotiana tabacum HOM05D002396 ORTHO05D002779 7.9e-17 93.2 96 65.6
EL10Ac5g12107 Beta vulgaris HOM05D003743 ORTHO05D004311 1.7e-11 75.5 60 61.7
PRCOL_00005809 Prasinoderma coloniale HOM05D003743 ORTHO05D004311 2.5e-10 71.6 401 25.2
MD05G1317500 Malus domestica HOM05D003743 ORTHO05D004311 2.7e-09 68.2 123 41.5
Cre03.g196450 Chlamydomonas reinhardtii HOM05D003743 ORTHO05D004311 4.7e-09 67.4 470 24.3
Lj8E171T0 Lonicera japonica HOM05D003743 ORTHO05D004311 8.2e-06 56.6 78 76.9


User provided reference genes

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