Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003348g0030 Nicotiana tabacum HOM05D000032 ORTHO05D007039 5.5e-79 297.7 169 100.0
Nitab4.5_0003942g0070 Nicotiana tabacum HOM05D000032 ORTHO05D007039 6.5e-72 274.2 148 95.3
Solyc10g009070.3 Solanum lycopersicum HOM05D000032 ORTHO05D007039 3.9e-61 238.4 153 81.7
Sopen10g004850 Solanum pennellii HOM05D000032 ORTHO05D007039 3.9e-61 238.4 153 81.7
Peaxi162Scf00066g01631 Petunia axillaris HOM05D000032 ORTHO05D007039 2.0e-57 226.1 154 78.6
CAN.G313.11 Capsicum annuum HOM05D000032 ORTHO05D007039 1.6e-54 216.5 126 84.9
QL09p029474 Quercus lobata HOM05D000032 ORTHO05D007039 8.5e-48 194.1 148 67.6
CSS0036844 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D007039 4.2e-47 191.8 153 65.4
Manes.04G035200 Manihot esculenta HOM05D000032 ORTHO05D007039 6.1e-46 188.0 154 63.0
CiPaw.16G019200 Carya illinoinensis HOM05D000032 ORTHO05D007039 1.0e-45 187.2 152 63.8
TAR381G0052 Trochodendron aralioides HOM05D000032 ORTHO05D007039 1.0e-45 187.2 158 65.2
vmacro05140 Vaccinium macrocarpon HOM05D000032 ORTHO05D007039 1.4e-45 186.8 147 66.7
Sabra05G0142000 Salix brachista HOM05D001345 ORTHO05D007039 2.3e-45 186.0 140 67.9
Potri.005G185900 Populus trichocarpa HOM05D000032 ORTHO05D007039 6.8e-45 184.5 138 67.4
GSVIVG01009983001 Vitis vinifera HOM05D000032 ORTHO05D007039 8.8e-45 184.1 155 65.8
Ciclev10000341m.g Citrus clementina HOM05D000032 ORTHO05D007039 1.5e-44 183.3 156 63.5
VMungo0331G2050 Vigna mungo HOM05D000032 ORTHO05D007039 1.5e-44 183.3 153 64.7
Cfa015213 Carpinus fangiana HOM05D000032 ORTHO05D007039 3.4e-44 182.2 154 63.0
SalBow6G7032 Salvia bowleyana HOM05D000032 ORTHO05D007039 3.4e-44 182.2 157 63.7
Glyma.03G001200 Glycine max HOM05D000032 ORTHO05D007039 4.4e-44 181.8 153 62.7
arahy.Tifrunner.gnm1.ann1.5XB3VI Arachis hypogaea HOM05D000032 ORTHO05D007039 7.5e-44 181.0 154 63.0
Duzib041G0456 Durio zibethinus HOM05D000032 ORTHO05D007039 7.5e-44 181.0 157 61.8
arahy.Tifrunner.gnm1.ann1.KPVC5H Arachis hypogaea HOM05D000032 ORTHO05D007039 9.8e-44 180.6 154 63.0
Hma1.2p1_0107F.1_g051290 Hydrangea macrophylla HOM05D000032 ORTHO05D007039 9.8e-44 180.6 140 65.0
Ca_18908_v3 Cicer arietinum L. HOM05D000032 ORTHO05D007039 1.7e-43 179.9 153 62.1
Gohir.D02G075100 Gossypium hirsutum HOM05D000032 ORTHO05D007039 3.7e-43 178.7 158 61.4
Gorai.005G084500 Gossypium raimondii HOM05D000032 ORTHO05D007039 6.3e-43 177.9 158 61.4
MD07G1108300 Malus domestica HOM05D000032 ORTHO05D007039 6.3e-43 177.9 155 65.2
Rhsim07G0177900 Rhododendron simsii HOM05D003181 ORTHO05D007039 1.8e-42 176.4 135 68.1
Gohir.A02G068600 Gossypium hirsutum HOM05D000032 ORTHO05D007039 2.4e-42 176.0 158 61.4
HanXRQChr15g0473601 Helianthus annuus HOM05D000032 ORTHO05D007039 4.1e-42 175.3 147 63.3
TPR.G34855 Trifolium pratense HOM05D000032 ORTHO05D007039 4.1e-42 175.3 153 60.8
Haze_01423 Corylus avellana HOM05D000032 ORTHO05D007039 1.2e-41 173.7 143 62.2
CsaV3_1G045380 Cucumis sativus L. HOM05D000032 ORTHO05D007039 2.0e-41 172.9 153 55.6
TWI32G0140 Tripterygium wilfordii HOM05D000032 ORTHO05D007039 2.0e-41 172.9 154 62.3
Eucgr.F02760 Eucalyptus grandis HOM05D000032 ORTHO05D007039 2.7e-41 172.6 140 60.0
Medtr4g079320 Medicago truncatula HOM05D000032 ORTHO05D007039 4.5e-41 171.8 154 59.7
Glyma.16G221700 Glycine max HOM05D000032 ORTHO05D007039 1.0e-40 170.6 153 60.1
Dinv25780 Davidia involucrata HOM05D000032 ORTHO05D007039 1.3e-40 170.2 128 67.2
Sed0020079 Sechium edule HOM05D000032 ORTHO05D007039 2.9e-40 169.1 153 56.9
DCAR_014397 Daucus carota HOM05D000032 ORTHO05D007039 6.6e-40 167.9 139 61.9
Nn2g15381 Nelumbo nucifera HOM05D000032 ORTHO05D007039 1.1e-39 167.2 152 61.8
Psat7g166920 Pisum sativum HOM05D000032 ORTHO05D007039 1.1e-39 167.2 131 66.4
MELO3C017528.2 Cucumis melo HOM05D000032 ORTHO05D007039 1.5e-39 166.8 153 53.6
FvH4_2g15160 Fragaria vesca HOM05D000032 ORTHO05D007039 4.2e-39 165.2 157 61.1
MBI02_g35824_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D007039 4.2e-39 165.2 140 61.4
MBI03_g28958_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D007039 4.2e-39 165.2 140 61.4
Oeu045989.1 Olea europaea HOM05D000032 ORTHO05D007039 4.2e-39 165.2 154 59.7
THA.LOC104812064 Tarenaya hassleriana HOM05D000032 ORTHO05D007039 4.2e-39 165.2 151 61.6
Lalb_Chr13g0294911 Lupinus albus HOM05D000032 ORTHO05D007039 5.5e-39 164.9 164 56.1
RcHm_v2.0_Chr6g0277821 Rosa chinensis HOM05D000032 ORTHO05D007039 5.5e-39 164.9 155 60.6
Phvul.010G059900 Phaseolus vulgaris HOM05D000032 ORTHO05D007039 7.2e-39 164.5 144 61.1
FAN24G0655 Fragaria x ananassa HOM05D000032 ORTHO05D007039 9.5e-39 164.1 157 60.5
Hund17378 Selenicereus undatus HOM05D000032 ORTHO05D007039 9.5e-39 164.1 140 60.7
COL.COLO4_35483 Corchorus olitorius HOM05D000032 ORTHO05D007039 4.7e-38 161.8 136 60.3
Aa31LG4G7090 Aethionema arabicum HOM05D000032 ORTHO05D007039 6.1e-38 161.4 143 62.2
FAN20G1738 Fragaria x ananassa HOM05D001345 ORTHO05D007039 6.1e-38 161.4 157 59.9
Prupe.2G131100 Prunus persica HOM05D000032 ORTHO05D007039 6.1e-38 161.4 141 61.7
Cpa.g.sc26.76 Carica papaya HOM05D000032 ORTHO05D007039 8.0e-38 161.0 127 65.4
ClCG10G008660 Citrullus lanatus HOM05D000032 ORTHO05D007039 8.0e-38 161.0 133 58.6
Cc00_g22660 Coffea canephora HOM05D000032 ORTHO05D007039 1.4e-37 160.2 122 66.4
FAN27G2140 Fragaria x ananassa HOM05D000032 ORTHO05D007039 1.4e-37 160.2 157 59.9
Lsat_1_v5_gn_1_39880 Lactuca sativa HOM05D000703 ORTHO05D007039 1.4e-37 160.2 159 57.2
Lj4A689G43 Lonicera japonica HOM05D000032 ORTHO05D007039 1.4e-37 160.2 131 65.6
Lj3g0011799 Lotus japonicus HOM05D000032 ORTHO05D007039 1.4e-37 160.2 155 57.4
Aqoxy5G02326 Aquilegia oxysepala HOM05D000032 ORTHO05D007039 2.3e-37 159.5 171 53.8
Thecc.08G139100 Theobroma cacao HOM05D000032 ORTHO05D007039 2.3e-37 159.5 132 62.9
Lju3549A0T30 Lonicera japonica HOM05D000032 ORTHO05D007039 6.8e-37 157.9 131 64.9
AUR62007669 Chenopodium quinoa HOM05D000032 ORTHO05D007039 1.2e-36 157.1 153 56.9
FAN15G1637 Fragaria x ananassa HOM05D000032 ORTHO05D007039 1.2e-36 157.1 157 59.9
unitig_52.g17544 Utricularia gibba HOM05D000032 ORTHO05D007039 1.2e-36 157.1 121 64.5
CDE11G0771 Ceratophyllum demersum HOM05D000032 ORTHO05D007039 3.4e-36 155.6 152 54.6
ECA248G0200 Erigeron canadensis HOM05D000032 ORTHO05D007039 5.7e-36 154.8 129 63.6
CDE05G3385 Ceratophyllum demersum HOM05D000032 ORTHO05D007039 9.8e-36 154.1 151 55.0
Migut.N03249 Erythranthe guttata HOM05D000032 ORTHO05D007039 1.3e-35 153.7 203 49.3
ATR0584G252 Amborella trichopoda HOM05D000032 ORTHO05D007039 6.3e-35 151.4 154 55.8
CARHR070560 Cardamine hirsuta HOM05D000032 ORTHO05D007039 8.3e-35 151.0 151 58.3
PSO017G0672 Papaver somniferum HOM05D000032 ORTHO05D007039 8.3e-35 151.0 160 51.2
C06p31480 Brassica napus HOM05D000032 ORTHO05D007039 1.8e-34 149.8 143 58.0
PSO478G2531 Papaver somniferum HOM05D000032 ORTHO05D007039 1.8e-34 149.8 160 51.2
BcaB02g07093 Brassica carinata HOM05D000032 ORTHO05D007039 5.4e-34 148.3 143 57.3
BolC6t38280H Brassica oleracea HOM05D000032 ORTHO05D007039 5.4e-34 148.3 143 57.3
BraA07t30454Z Brassica rapa HOM05D000032 ORTHO05D007039 7.0e-34 147.9 143 57.3
BcaNung04681 Brassica carinata HOM05D000032 ORTHO05D007039 1.2e-33 147.1 152 55.9
SGA_v2.0_scaffold25G11147 Striga asiatica HOM05D000032 ORTHO05D007039 1.2e-33 147.1 123 60.2
AT1G77030 Arabidopsis thaliana HOM05D000032 ORTHO05D007039 1.6e-33 146.7 139 57.6
A07p28090 Brassica napus HOM05D000032 ORTHO05D007039 1.6e-33 146.7 143 56.6
BcaNung04684 Brassica carinata HOM05D000032 ORTHO05D007039 2.7e-33 146.0 152 55.9
SHI09252 Sapria himalayana HOM05D000032 ORTHO05D007039 2.7e-33 146.0 138 56.5
PGR042G3397 Punica granatum HOM05D000032 ORTHO05D007039 7.8e-33 144.4 154 52.6
Sp5g32190 Schrenkiella parvula HOM05D000032 ORTHO05D007039 2.3e-32 142.9 150 54.7
AL2G37210 Arabidopsis lyrata HOM05D000032 ORTHO05D007039 2.9e-32 142.5 126 61.1
EL10Ac1g01414 Beta vulgaris HOM05D000032 ORTHO05D007039 2.9e-32 142.5 152 53.9
Carub.0002s2395 Capsella rubella HOM05D000032 ORTHO05D007039 1.9e-31 139.8 123 64.2
SEGI_17341 Sequoiadendron giganteum HOM05D000032 ORTHO05D007039 4.3e-31 138.7 149 53.7
Thhalv10018119m.g Eutrema salsugineum HOM05D000032 ORTHO05D007039 7.3e-31 137.9 126 63.5
HPP92_015492 Vanilla planifolia HOM05D000032 ORTHO05D007039 9.5e-31 137.5 150 50.0
Actinidia10684 Actinidia chinensis HOM05D000032 ORTHO05D007039 6.1e-30 134.8 100 67.0
AUR62013465 Chenopodium quinoa HOM05D000032 ORTHO05D007039 8.0e-30 134.4 131 57.3
BcaB02g07095 Brassica carinata HOM05D000032 ORTHO05D007039 4.0e-29 132.1 126 58.7
Pp3c14_6810 Physcomitrium patens HOM05D000032 ORTHO05D007039 6.4e-27 124.8 138 50.0
Glyma.16G116400 Glycine max HOM05D000032 ORTHO05D007039 3.5e-25 119.0 103 62.1
Zm00001eb179010 Zea mays HOM05D000032 ORTHO05D007039 1.7e-24 116.7 143 48.3
Mapoly0165s0019 Marchantia polymorpha HOM05D000032 ORTHO05D007039 6.6e-24 114.8 131 46.6
Os08g0416100 Oryza sativa ssp. japonica HOM05D000032 ORTHO05D007039 1.5e-23 113.6 156 45.5
SMO361G0600 Selaginella moellendorffii HOM05D000032 ORTHO05D007039 2.5e-23 112.8 153 46.4
SMO361G0757 Selaginella moellendorffii HOM05D000032 ORTHO05D007039 2.5e-23 112.8 153 46.4
AagrBONN_evm.TU.Sc2ySwM_228.4830 Anthoceros agrestis HOM05D000032 ORTHO05D007039 3.3e-23 112.5 135 46.7
CANSAT80G2781 Cannabis sativa HOM05D000032 ORTHO05D007039 5.6e-23 111.7 73 67.1
Thecc.08G140000 Theobroma cacao HOM05D000032 ORTHO05D007039 8.3e-19 97.8 92 59.8
CBR_g757 Chara braunii HOM05D000032 ORTHO05D007039 3.1e-13 79.3 167 33.5
BolC5t30359H Brassica oleracea HOM05D001251 ORTHO05D020080 4.9e-11 72.0 50 70.0
C05p33370 Brassica napus HOM05D019533 ORTHO05D020080 1.4e-10 70.5 73 57.5
BolC5t32062H Brassica oleracea HOM05D019533 ORTHO05D020080 1.4e-10 70.5 73 57.5
PRCOL_00001178 Prasinoderma coloniale HOM05D000032 ORTHO05D007039 7.1e-10 68.2 157 33.8
Cre12.g513701 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D007039 1.5e-07 60.5 72 41.7
SGA_v2.0_scaffold19G08689 Striga asiatica HOM05D001345 ORTHO05D001190 1.6e-06 57.0 36 72.2


User provided reference genes

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