Gene: Lsat_1_v5_gn_1_39880

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_1_39880
  • Transcript Identifier Lsat_1_v5_gn_1_39880.5
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_1 : 45557177-45568426 : negative

Gene Family Information

  • ID HOM05D000703
  • #Genes/#Species 815/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_1_39880.v5
  • pacid 38948350

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IEA
InterProprotein phosphorylation
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc10g009070.3
GO:1902584
ISO
PLAZA Integrative Orthologypositive regulation of response to water deprivation AT3G17410
GO:0009789
ISO
PLAZA Integrative Orthologypositive regulation of abscisic acid-activated signaling pathway AT3G17410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003724
IEA
InterProRNA helicase activity
GO:0005524
IEA
InterProATP binding
GO:0004672
IEA
InterProprotein kinase activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0000287
ISO
PLAZA Integrative Orthologymagnesium ion binding AT3G17410
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Solyc12g098980.2
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G77030

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G17410
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G48210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR012541 DBP10, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000719 Protein kinase domain
IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR011009 Protein kinase-like domain superfamily
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
18.4.1.38.1 Protein modification.phosphorylation.TKL protein kinase superfamily.RLCK-VIII receptor-like protein kinase families.receptor-like protein kinase (RLCK-VIII)