Gene: Sopen10g004850

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g004850
  • Transcript Identifier Sopen10g004850.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 3216339-3227107 : negative

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g004850.1

Descriptions

  • Description hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides, ATP-dependent helicases, nucleic acid binding, ATP binding, RNA binding, helicases | FUNCTIONS IN: in 6 functions | INVOLVED IN: biological_process unknown | LOCATED IN: nucleus | CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , DBP10CT , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc10g009070.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003723
IEA
InterProRNA binding
GO:0003724
IEA
InterProRNA helicase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G77030

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011545 DEAD/DEAH box helicase domain
IPR012541 DBP10, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated