Gene: Sopen10g004850
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g004850
- Transcript Identifier Sopen10g004850.1
- Gene Type Coding gene
- Location Spenn-ch10 : 3216339-3227107 : negative
Gene Family Information
- ID HOM05D000032
- #Genes/#Species 5307/100
- Phylogenetic origin
- ID ORTHO05D007039
- #Genes/#Species 135/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen10g004850.1
Descriptions
- Description hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides, ATP-dependent helicases, nucleic acid binding, ATP binding, RNA binding, helicases | FUNCTIONS IN: in 6 functions | INVOLVED IN: biological_process unknown | LOCATED IN: nucleus | CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , DBP10CT , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc10g009070.3 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0003723 | IEA | InterPro | RNA binding | |
GO:0003724 | IEA | InterPro | RNA helicase activity | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G77030 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | InterPro | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |