Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003247g0070 Nicotiana tabacum HOM05D005817 ORTHO05D007140 4.3e-136 488.0 254 100.0
Nitab4.5_0007689g0010 Nicotiana tabacum HOM05D005817 ORTHO05D007140 3.0e-129 465.3 246 97.6
Solyc01g103020.4 Solanum lycopersicum HOM05D005817 ORTHO05D007140 3.4e-117 425.2 246 90.7
PGSC0003DMG400020713 Solanum tuberosum HOM05D005817 ORTHO05D007140 7.6e-117 424.1 246 90.2
CAN.G855.54 Capsicum annuum HOM05D005817 ORTHO05D007140 1.0e-116 423.7 246 88.6
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 3.1e-94 349.0 285 68.8
Cc02_g23610 Coffea canephora HOM05D005817 ORTHO05D007140 1.5e-93 346.7 248 74.2
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 1.5e-93 346.7 251 74.5
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 1.7e-92 343.2 244 75.0
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 5.0e-92 341.7 243 75.3
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 5.0e-92 341.7 253 70.8
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 1.4e-91 340.1 245 73.1
Oeu028476.1 Olea europaea HOM05D005817 ORTHO05D007140 5.5e-91 338.2 245 72.7
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 1.2e-90 337.0 245 75.1
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 2.1e-90 336.3 244 75.0
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 2.3e-89 332.8 244 73.4
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 3.0e-89 332.4 244 72.5
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 8.8e-89 330.9 243 73.3
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 2.0e-88 329.7 262 69.5
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 2.0e-88 329.7 244 71.3
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 3.3e-88 328.9 251 72.1
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 4.4e-88 328.6 244 71.3
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 7.4e-88 327.8 262 69.1
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 7.4e-88 327.8 248 73.4
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 1.7e-87 326.6 242 71.9
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 2.2e-87 326.2 245 72.2
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 2.2e-87 326.2 245 73.1
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 6.3e-87 324.7 252 69.8
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 4.1e-86 322.0 244 74.2
Sopen01g045430 Solanum pennellii HOM05D005817 ORTHO05D007140 7.0e-86 321.2 179 90.5
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 7.0e-86 321.2 247 71.7
Glyma.07G272500 Glycine max HOM05D005817 ORTHO05D007140 9.1e-86 320.9 243 71.6
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 1.2e-85 320.5 244 73.4
SGA_v2.0_scaffold8G04460 Striga asiatica HOM05D005817 ORTHO05D007140 1.6e-85 320.1 245 70.2
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 2.0e-85 319.7 254 70.9
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 7.7e-85 317.8 248 69.8
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 1.0e-84 317.4 245 68.6
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.0e-84 317.4 245 68.6
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 1.3e-84 317.0 244 71.7
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 1.3e-84 317.0 244 72.5
Migut.N00865 Erythranthe guttata HOM05D005817 ORTHO05D007140 1.7e-84 316.6 251 68.1
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 2.2e-84 316.2 247 71.7
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 3.8e-84 315.5 244 72.1
ECA236G3641 Erigeron canadensis HOM05D000284 ORTHO05D000805 6.5e-84 314.7 251 71.3
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 1.1e-83 313.9 244 72.5
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 1.5e-83 313.5 248 69.0
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 1.5e-83 313.5 247 70.4
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 1.5e-83 313.5 247 70.9
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 4.2e-83 312.0 240 69.2
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 5.5e-83 311.6 244 71.7
Aqoxy6G00025 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 7.2e-83 311.2 247 68.4
Duzib235G1547 Durio zibethinus HOM05D005817 ORTHO05D007140 7.2e-83 311.2 244 73.0
HanXRQChr15g0469671 Helianthus annuus HOM05D005817 ORTHO05D007140 1.2e-82 310.5 255 70.2
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 1.6e-82 310.1 246 70.7
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 3.6e-82 308.9 243 69.1
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 8.0e-82 307.8 251 68.5
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.0e-81 307.4 246 69.5
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 5.2e-81 305.1 246 69.5
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 4.4e-80 302.0 279 64.2
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 5.7e-80 301.6 247 65.6
MSTRG.27880 Avicennia marina HOM05D005817 ORTHO05D007140 9.7e-80 300.8 229 70.7
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 2.2e-79 299.7 251 66.1
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 3.7e-79 298.9 309 56.0
BcaC06g31224 Brassica carinata HOM05D005817 ORTHO05D007140 4.8e-79 298.5 249 68.7
ATR1089G128 Amborella trichopoda HOM05D005817 ORTHO05D007140 8.2e-79 297.7 247 66.8
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 1.1e-78 297.4 249 66.3
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 1.1e-78 297.4 249 67.1
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.1e-78 297.4 246 67.1
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 1.1e-78 297.4 297 59.9
AT2G02570 Arabidopsis thaliana HOM05D005817 ORTHO05D007140 1.8e-78 296.6 249 65.9
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 1.8e-78 296.6 246 66.3
Hund15375 Selenicereus undatus HOM05D005817 ORTHO05D007140 2.4e-78 296.2 221 72.4
C07p33290 Brassica napus HOM05D005817 ORTHO05D007140 5.3e-78 295.0 243 67.1
BolC7t43840H Brassica oleracea HOM05D005817 ORTHO05D007140 5.3e-78 295.0 243 67.1
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 1.6e-77 293.5 265 64.9
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 5.9e-77 291.6 229 70.7
Ah.03g136770 Amaranthus hybridus HOM05D005817 ORTHO05D007140 1.3e-76 290.4 270 61.5
A06p43560 Brassica napus HOM05D005817 ORTHO05D007140 1.3e-76 290.4 243 66.7
BcaC03g17157 Brassica carinata HOM05D005817 ORTHO05D007140 1.1e-75 287.3 247 65.2
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.1e-75 287.3 313 53.7
BraA06t27241Z Brassica rapa HOM05D005817 ORTHO05D007140 3.6e-74 282.3 269 61.0
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 1.4e-73 280.4 241 64.3
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 1.8e-73 280.0 203 74.4
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 8.8e-73 277.7 225 68.4
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.1e-70 270.8 239 63.2
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 7.0e-70 268.1 281 56.2
C02p50820 Brassica napus HOM05D005817 ORTHO05D007140 5.9e-69 265.0 240 63.8
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 1.0e-68 264.2 203 72.4
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 2.2e-68 263.1 207 69.6
AUR62043876 Chenopodium quinoa HOM05D005817 ORTHO05D007140 3.8e-68 262.3 227 66.1
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 5.0e-68 261.9 200 70.5
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 8.5e-68 261.2 314 51.6
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 1.5e-67 260.4 256 60.9
unitig_22.g6849 Utricularia gibba HOM05D005817 ORTHO05D007140 1.5e-67 260.4 277 55.6
BolC2t11164H Brassica oleracea HOM05D005817 ORTHO05D007140 7.2e-67 258.1 244 62.7
MSTRG.601 Avicennia marina HOM05D005817 ORTHO05D007140 6.1e-66 255.0 207 67.1
Mapoly0107s0026 Marchantia polymorpha HOM05D005817 ORTHO05D007140 7.5e-64 248.1 245 58.8
BraA02t08326Z Brassica rapa HOM05D005817 ORTHO05D007140 4.9e-63 245.4 248 59.3
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 1.8e-62 243.4 202 68.3
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 3.1e-62 242.7 202 68.3
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 3.1e-62 242.7 152 78.9
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 9.2e-62 241.1 200 66.5
Actinidia26194 Actinidia chinensis HOM05D005817 ORTHO05D007140 1.6e-61 240.4 255 60.0
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 7.7e-61 238.0 205 64.9
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 1.7e-60 236.9 159 76.1
SHI04993 Sapria himalayana HOM05D005817 ORTHO05D007140 1.9e-59 233.4 269 51.7
Lj5C284T7 Lonicera japonica HOM05D005817 ORTHO05D007140 6.1e-58 228.4 154 76.6
Pp3c14_9240 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.0e-57 227.6 268 51.5
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 1.8e-57 226.9 199 64.8
AUR62032450 Chenopodium quinoa HOM05D005817 ORTHO05D007140 5.2e-57 225.3 233 58.4
A02p33050 Brassica napus HOM05D005817 ORTHO05D007140 4.4e-56 222.2 203 64.0
Dinv29634 Davidia involucrata HOM05D005817 ORTHO05D007140 7.5e-56 221.5 157 73.2
Pp3c10_3580 Physcomitrium patens HOM05D005817 ORTHO05D007140 4.9e-55 218.8 271 49.4
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis HOM05D005817 ORTHO05D007140 3.9e-52 209.1 252 49.2
Aqoxy385s001 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 1.9e-51 206.8 247 53.8
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.9e-51 206.8 201 58.7
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 5.6e-51 205.3 131 80.9
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 3.7e-47 192.6 130 74.6
CBR_g40810 Chara braunii HOM05D005817 ORTHO05D007140 5.0e-44 182.2 297 42.8
SMO117G0163 Selaginella moellendorffii HOM05D005817 ORTHO05D007140 1.1e-43 181.0 145 64.8
Pp3c10_3582 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.9e-43 180.3 192 53.1
Pp3c1_22040 Physcomitrium patens HOM05D005817 ORTHO05D007140 6.4e-39 165.2 228 45.2
RcHm_v2.0_Chr5g0068831 Rosa chinensis HOM05D005817 ORTHO05D007140 8.6e-36 154.8 102 78.4
VMungo0766G0001 Vigna mungo HOM05D005817 ORTHO05D007140 2.9e-31 139.8 122 64.8
Zm00001eb174130 Zea mays HOM05D005817 ORTHO05D007140 6.4e-23 112.1 76 81.6
VMungo1148G0001 Vigna mungo HOM05D005817 ORTHO05D007140 7.3e-19 98.6 75 76.0
MCO12G229 Micromonas commoda HOM05D005817 ORTHO05D007140 7.6e-16 88.6 256 30.1
Cre02.g106550 Chlamydomonas reinhardtii HOM05D005817 ORTHO05D007140 3.8e-15 86.3 289 31.1
SEGI_07435 Sequoiadendron giganteum HOM05D005817 ORTHO05D007140 9.3e-14 81.6 89 49.4
Thhalv10005196m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 6.9e-09 65.5 43 79.1
Lalb_Chr12g0195851 Lupinus albus HOM05D005817 ORTHO05D007140 9.0e-09 65.1 51 64.7
COL.COLO4_38165 Corchorus olitorius HOM05D011921 ORTHO05D160408 9.9e-08 61.6 89 47.2
PRCOL_00002712 Prasinoderma coloniale HOM05D005817 ORTHO05D007140 1.7e-07 60.8 282 24.8
CARHR145100 Cardamine hirsuta HOM05D005817 ORTHO05D007140 3.2e-06 56.6 68 52.9


User provided reference genes

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