Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003113g0020 Nicotiana tabacum HOM05D004958 ORTHO05D005983 9.4e-128 460.3 248 100.0
Nitab4.5_0003994g0020 Nicotiana tabacum HOM05D004958 ORTHO05D005983 5.5e-112 407.9 246 91.1
Nitab4.5_0001586g0220 Nicotiana tabacum HOM05D004958 ORTHO05D005983 8.8e-110 400.6 248 87.5
Nitab4.5_0002553g0040 Nicotiana tabacum HOM05D004958 ORTHO05D005983 4.1e-107 391.7 248 86.3
PGSC0003DMG400026921 Solanum tuberosum HOM05D004958 ORTHO05D005983 9.1e-107 390.6 246 85.4
Sopen06g029470 Solanum pennellii HOM05D004958 ORTHO05D005983 2.2e-105 386.0 246 84.1
CAN.G65.155 Capsicum annuum HOM05D004958 ORTHO05D005983 7.2e-104 380.9 246 85.0
Solyc06g073120.4 Solanum lycopersicum HOM05D004958 ORTHO05D005983 1.6e-103 379.8 243 83.5
Peaxi162Scf01294g00034 Petunia axillaris HOM05D004958 ORTHO05D005983 4.5e-98 361.7 248 80.6
CSS0008368 Camellia sinensis var. sinensis HOM05D004958 ORTHO05D005983 1.5e-88 330.1 250 70.4
MSTRG.1893 Avicennia marina HOM05D004958 ORTHO05D005983 8.0e-87 324.3 243 72.0
SGA_v2.0_scaffold196G40881 Striga asiatica HOM05D004958 ORTHO05D005983 3.1e-86 322.4 247 69.2
Migut.E01294 Erythranthe guttata HOM05D004958 ORTHO05D005983 8.9e-86 320.9 249 70.7
Actinidia27408 Actinidia chinensis HOM05D004958 ORTHO05D005983 4.1e-83 312.0 247 68.4
Hma1.2p1_0514F.1_g170070 Hydrangea macrophylla HOM05D004958 ORTHO05D005983 1.9e-80 303.1 240 67.5
Eucgr.D01919 Eucalyptus grandis HOM05D004958 ORTHO05D005983 1.2e-79 300.4 232 70.3
Hund11528 Selenicereus undatus HOM05D004958 ORTHO05D005983 1.6e-79 300.1 242 65.7
GSVIVG01019856001 Vitis vinifera HOM05D004958 ORTHO05D005983 8.0e-79 297.7 245 66.1
vmacro13919 Vaccinium macrocarpon HOM05D004958 ORTHO05D005983 1.8e-78 296.6 247 67.6
Lsat_1_v5_gn_6_87641 Lactuca sativa HOM05D004958 ORTHO05D005983 5.2e-78 295.0 249 65.9
DCAR_008420 Daucus carota HOM05D004958 ORTHO05D005983 9.8e-77 290.8 252 63.1
PGR031G1609 Punica granatum HOM05D004958 ORTHO05D005983 4.9e-76 288.5 248 65.3
Thecc.03G271700 Theobroma cacao HOM05D004958 ORTHO05D005983 1.4e-75 287.0 258 58.9
Atru.chr12.1358 Acer truncatum HOM05D004958 ORTHO05D005983 5.4e-75 285.0 244 63.1
Potri.001G110000 Populus trichocarpa HOM05D004958 ORTHO05D005983 3.5e-74 282.3 228 64.0
Ah.12g057600 Amaranthus hybridus HOM05D004958 ORTHO05D005983 4.6e-74 282.0 244 61.5
Duzib068G0251 Durio zibethinus HOM05D004958 ORTHO05D005983 7.8e-74 281.2 263 57.8
Manes.01G066700 Manihot esculenta HOM05D004958 ORTHO05D005983 1.0e-73 280.8 218 65.1
FvH4_7g07500 Fragaria vesca HOM05D004958 ORTHO05D005983 5.1e-73 278.5 248 60.9
Ciclev10021851m.g Citrus clementina HOM05D004958 ORTHO05D005983 6.6e-73 278.1 249 59.8
Prupe.6G131000 Prunus persica HOM05D004958 ORTHO05D005983 1.5e-72 276.9 247 61.1
RcHm_v2.0_Chr5g0045251 Rosa chinensis HOM05D004958 ORTHO05D005983 1.5e-72 276.9 246 61.8
Gohir.D11G021000 Gossypium hirsutum HOM05D004958 ORTHO05D005983 1.9e-72 276.6 216 65.7
Nn6g34244 Nelumbo nucifera HOM05D004958 ORTHO05D005983 3.3e-72 275.8 247 61.9
VMungo0331G1538 Vigna mungo HOM05D004958 ORTHO05D005983 5.6e-72 275.0 254 57.5
Sed0017231 Sechium edule HOM05D004958 ORTHO05D005983 7.3e-72 274.6 252 60.3
FAN03G3010 Fragaria x ananassa HOM05D004958 ORTHO05D005983 9.5e-72 274.2 248 60.1
Gorai.007G022300 Gossypium raimondii HOM05D004958 ORTHO05D005983 9.5e-72 274.2 209 66.5
FvH4_3g25070 Fragaria vesca HOM05D000097 ORTHO05D005983 1.6e-71 273.5 220 65.5
FAN06G2073 Fragaria x ananassa HOM05D004958 ORTHO05D005983 2.1e-71 273.1 248 60.1
FAN10G1939 Fragaria x ananassa HOM05D004958 ORTHO05D005983 2.1e-71 273.1 248 60.1
Ca_05359_v3 Cicer arietinum L. HOM05D004958 ORTHO05D005983 2.8e-71 272.7 211 65.4
ClCG08G000800 Citrullus lanatus HOM05D004958 ORTHO05D005983 3.6e-71 272.3 250 59.2
Phvul.009G080900 Phaseolus vulgaris HOM05D004958 ORTHO05D005983 4.7e-71 271.9 223 63.2
Phvul.010G049100 Phaseolus vulgaris HOM05D004958 ORTHO05D005983 6.2e-71 271.6 223 63.7
Glyma.07G082900 Glycine max HOM05D004958 ORTHO05D005983 8.1e-71 271.2 243 59.3
Lj3g0000848 Lotus japonicus HOM05D004958 ORTHO05D005983 6.8e-70 268.1 210 64.3
arahy.Tifrunner.gnm1.ann1.BCQ50G Arachis hypogaea HOM05D004958 ORTHO05D005983 1.2e-69 267.3 212 64.6
MELO3C019927.2 Cucumis melo HOM05D004958 ORTHO05D005983 1.2e-69 267.3 252 59.5
Gohir.A11G021300 Gossypium hirsutum HOM05D004958 ORTHO05D005983 1.2e-69 267.3 261 57.1
Ca_24641_v3 Cicer arietinum L. HOM05D004958 ORTHO05D005983 1.5e-69 266.9 248 57.7
Lalb_Chr12g0208371 Lupinus albus HOM05D004958 ORTHO05D005983 1.5e-69 266.9 244 57.8
Lalb_Chr12g0208451 Lupinus albus HOM05D004958 ORTHO05D005983 1.5e-69 266.9 244 57.8
HPP92_003759 Vanilla planifolia HOM05D004958 ORTHO05D005983 2.6e-69 266.2 224 64.3
Aqoxy5G02043 Aquilegia oxysepala HOM05D004958 ORTHO05D005983 3.4e-69 265.8 246 61.4
FAN01G2068 Fragaria x ananassa HOM05D004958 ORTHO05D005983 4.4e-69 265.4 241 59.8
Medtr5g058150 Medicago truncatula HOM05D004958 ORTHO05D005983 5.8e-69 265.0 210 64.3
SalBow7G2511 Salvia bowleyana HOM05D004958 ORTHO05D005983 9.9e-69 264.2 212 68.4
ECA240G3664 Erigeron canadensis HOM05D004958 ORTHO05D005983 3.7e-68 262.3 241 61.0
Rhsim07G0094600 Rhododendron simsii HOM05D004958 ORTHO05D005983 3.7e-68 262.3 214 69.2
Lalb_Chr07g0189581 Lupinus albus HOM05D004958 ORTHO05D005983 4.9e-68 261.9 239 58.2
Glyma.03G021100 Glycine max HOM05D004958 ORTHO05D005983 1.4e-67 260.4 235 58.7
MD03G1146200 Malus domestica HOM05D004958 ORTHO05D005983 2.4e-67 259.6 236 61.0
THA.LOC104823571 Tarenaya hassleriana HOM05D004958 ORTHO05D005983 5.4e-67 258.5 212 65.6
Psat0s646g0120 Pisum sativum HOM05D004958 ORTHO05D005983 7.1e-67 258.1 233 59.7
CsaV3_5G039810 Cucumis sativus L. HOM05D004958 ORTHO05D005983 9.2e-67 257.7 276 55.1
Cc08_g14020 Coffea canephora HOM05D004958 ORTHO05D005983 1.6e-66 256.9 209 68.4
TWI81G1011 Tripterygium wilfordii HOM05D004958 ORTHO05D005983 2.7e-66 256.1 258 57.8
vmacro12796 Vaccinium macrocarpon HOM05D004958 ORTHO05D005983 2.7e-66 256.1 302 52.6
Prupe.8G125000 Prunus persica HOM05D004958 ORTHO05D005983 3.5e-66 255.8 257 56.8
ATR0757G162 Amborella trichopoda HOM05D004958 ORTHO05D005983 4.6e-66 255.4 225 61.3
MBI11_g40802_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 4.6e-66 255.4 211 64.5
Carub.0001s1234 Capsella rubella HOM05D004958 ORTHO05D005983 2.3e-65 253.1 247 58.3
EL10Ac5g12729 Beta vulgaris HOM05D004958 ORTHO05D005983 2.5e-64 249.6 239 58.2
Os09g0525200 Oryza sativa ssp. japonica HOM05D004958 ORTHO05D005983 3.3e-64 249.2 214 64.5
unitig_899.g14861 Utricularia gibba HOM05D004958 ORTHO05D005983 4.3e-64 248.8 273 55.3
TPR.G27805 Trifolium pratense HOM05D004958 ORTHO05D005983 9.5e-64 247.7 211 60.2
MBI11_g41127_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 1.6e-63 246.9 198 65.7
PSO782G2900 Papaver somniferum HOM05D004958 ORTHO05D005983 1.6e-63 246.9 215 60.5
PSO478G4928 Papaver somniferum HOM05D004958 ORTHO05D005983 1.4e-62 243.8 219 59.4
SEGI_09748 Sequoiadendron giganteum HOM05D004958 ORTHO05D005983 1.8e-62 243.4 209 59.8
COL.COLO4_09338 Corchorus olitorius HOM05D001926 ORTHO05D002121 8.9e-62 241.1 217 60.8
FAN11G1832 Fragaria x ananassa HOM05D000097 ORTHO05D005983 2.6e-61 239.6 241 56.8
MBI11_g31491_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 3.4e-61 239.2 228 57.9
Medtr6g075250 Medicago truncatula HOM05D004958 ORTHO05D005983 4.4e-61 238.8 250 52.0
AL1G24110 Arabidopsis lyrata HOM05D004958 ORTHO05D005983 1.3e-60 237.3 237 56.5
Zm00001eb103160 Zea mays HOM05D004958 ORTHO05D005983 1.7e-60 236.9 213 60.6
Cfa012106 Carpinus fangiana HOM05D004958 ORTHO05D005983 1.2e-58 230.7 251 55.0
AT1G12650 Arabidopsis thaliana HOM05D004958 ORTHO05D005983 1.6e-58 230.3 239 55.2
QL12p017317 Quercus lobata HOM05D004958 ORTHO05D005983 1.9e-56 223.4 324 43.5
Sp1g11240 Schrenkiella parvula HOM05D004958 ORTHO05D005983 9.6e-56 221.1 214 54.7
CARHR012940 Cardamine hirsuta HOM05D004958 ORTHO05D005983 2.8e-55 219.5 241 51.9
AUR62017291 Chenopodium quinoa HOM05D004958 ORTHO05D005983 1.8e-54 216.9 171 64.3
Haze_20475 Corylus avellana HOM05D004958 ORTHO05D005983 1.8e-54 216.9 309 45.6
Pp3c15_19260 Physcomitrium patens HOM05D004958 ORTHO05D005983 4.0e-54 215.7 212 53.8
BcaB08g34261 Brassica carinata HOM05D004958 ORTHO05D005983 2.6e-53 213.0 182 59.3
Sc22g0000230 Simmondsia chinensis HOM05D004958 ORTHO05D005983 1.3e-52 210.7 196 61.2
BraA09t41722Z Brassica rapa HOM05D004958 ORTHO05D005983 1.7e-52 210.3 224 51.3
MBI11_g47761_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 2.9e-52 209.5 170 64.1
A09p63740 Brassica napus HOM05D004958 ORTHO05D005983 3.8e-52 209.1 224 50.9
MBI11_g41124_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 3.8e-52 209.1 164 65.9
C08p47240 Brassica napus HOM05D004958 ORTHO05D005983 1.1e-51 207.6 223 51.6
AagrBONN_evm.TU.Sc2ySwM_362.2285 Anthoceros agrestis HOM05D004958 ORTHO05D005983 1.9e-51 206.8 211 53.1
MBI04_g02075_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 1.9e-51 206.8 250 52.4
Dinv39007 Davidia involucrata HOM05D004958 ORTHO05D005983 9.3e-51 204.5 157 68.8
BolC8t52265H Brassica oleracea HOM05D004958 ORTHO05D005983 1.2e-50 204.1 261 47.9
MD11G1165500 Malus domestica HOM05D004958 ORTHO05D005983 1.0e-49 201.1 317 44.5
Mapoly0004s0034 Marchantia polymorpha HOM05D004958 ORTHO05D005983 1.3e-49 200.7 226 49.1
Aa31LG1G2030 Aethionema arabicum HOM05D004958 ORTHO05D005983 3.9e-49 199.1 233 52.4
Sabra01G0083200 Salix brachista HOM05D004958 ORTHO05D005983 6.6e-49 198.4 221 50.7
CiPaw.12G097900 Carya illinoinensis HOM05D004958 ORTHO05D005983 4.3e-48 195.7 282 44.7
SMO228G0196 Selaginella moellendorffii HOM05D004958 ORTHO05D005983 4.3e-48 195.7 203 50.7
AUR62010651 Chenopodium quinoa HOM05D004958 ORTHO05D005983 1.6e-47 193.7 216 51.9
Thhalv10008688m.g Eutrema salsugineum HOM05D004958 ORTHO05D005983 1.6e-47 193.7 211 54.5
BcaC07g41688 Brassica carinata HOM05D004958 ORTHO05D005983 1.4e-46 190.7 257 46.7
FAN21G2287 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.4e-46 190.7 169 60.9
Eucgr.L01965 Eucalyptus grandis HOM05D004958 ORTHO05D005983 4.5e-45 185.7 156 66.0
Atru.chr12.1359 Acer truncatum HOM05D004958 ORTHO05D005983 8.4e-44 181.4 244 45.9
CDE02G4341 Ceratophyllum demersum HOM05D004958 ORTHO05D005983 4.6e-34 149.1 144 56.2
Cre09.g401663 Chlamydomonas reinhardtii HOM05D004958 ORTHO05D005983 1.8e-33 147.1 223 41.7
CBR_g12215 Chara braunii HOM05D004958 ORTHO05D005983 3.0e-33 146.4 174 46.6
Zm00001eb297680 Zea mays HOM05D004958 ORTHO05D005983 1.4e-27 127.5 94 69.1
Phvul.009G247000 Phaseolus vulgaris HOM05D004958 ORTHO05D005983 7.1e-27 125.2 244 36.5
Haze_08945 Corylus avellana HOM05D004958 ORTHO05D005983 2.3e-25 120.2 119 56.3
MBI11_g32389_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 2.3e-25 120.2 234 40.2
PRCOL_00004135 Prasinoderma coloniale HOM05D004958 ORTHO05D005983 4.8e-23 112.5 211 34.6
Aqoxy60s002 Aquilegia oxysepala HOM05D004958 ORTHO05D005983 1.1e-22 111.3 126 56.3
SEGI_22925 Sequoiadendron giganteum HOM05D004958 ORTHO05D005983 9.0e-22 108.2 95 62.1
Oeu011662.1 Olea europaea HOM05D004958 ORTHO05D005983 3.2e-19 99.8 106 57.5
QL02p071798 Quercus lobata HOM05D004958 ORTHO05D005983 4.2e-19 99.4 232 34.9
Cfa023436 Carpinus fangiana HOM05D004958 ORTHO05D005983 8.8e-17 91.7 230 30.9
FvH4_3g24970 Fragaria vesca HOM05D004958 ORTHO05D005983 2.0e-16 90.5 82 61.0
MBI11_g12655_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 2.5e-16 90.1 166 39.2
A09p63730 Brassica napus HOM05D007482 ORTHO05D003038 3.3e-16 89.7 73 64.4
TAR636G1581 Trochodendron aralioides HOM05D004958 ORTHO05D005983 4.3e-16 89.4 83 59.0
MBI11_g47763_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 9.7e-16 88.2 178 37.1
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 3.7e-15 86.3 59 64.4
FAN11G3948 Fragaria x ananassa HOM05D004958 ORTHO05D005983 6.9e-14 82.0 213 33.3
Zm00001eb199630 Zea mays HOM05D004958 ORTHO05D005983 4.5e-13 79.3 56 62.5
Cpa.g.sc53.73 Carica papaya HOM05D004958 ORTHO05D005983 4.2e-11 72.8 50 70.0
Zm00001eb282240 Zea mays HOM05D004142 ORTHO05D005411 7.2e-11 72.0 55 74.5
Zm00001eb112060 Zea mays HOM05D004142 ORTHO05D005983 3.6e-10 69.7 55 72.7
FAN15G1616 Fragaria x ananassa HOM05D004958 ORTHO05D005983 6.3e-07 58.9 47 59.6
Zm00001eb118520 Zea mays HOM05D004958 ORTHO05D005983 8.2e-07 58.5 51 66.7
C08p47230 Brassica napus HOM05D007482 ORTHO05D003038 1.8e-06 57.4 73 49.3
Aqoxy107s001 Aquilegia oxysepala HOM05D004958 ORTHO05D005983 7.0e-06 55.5 84 50.0
BcaB03g13174 Brassica carinata HOM05D004958 ORTHO05D005983 9.1e-06 55.1 49 55.1


User provided reference genes

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