Gene: COL.COLO4_09338
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_09338
- Transcript Identifier COL.rna8134
- Gene Type Coding gene
- Location AWUE01014222.1 : 93620-98836 : positive
Gene Family Information
- ID HOM05D001926
- #Genes/#Species 343/98
- Phylogenetic origin
- ID ORTHO05D002121
- #Genes/#Species 315/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna8134
- GenBank OMP04763.1
- id gene9310
- gene_name COLO4_09338
- uniprot A0A1R3KCF2
Descriptions
- Description Ribosomal protein S7e
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation | |
| GO:0000469 | IEA | GOA Database | cleavage involved in rRNA processing | |
| GO:0000469 | IEA | InterPro | cleavage involved in rRNA processing | |
| GO:0042254 | IEA | GOA Database | ribosome biogenesis | |
| GO:0006364 | IEA | GOA Database | rRNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G16130 |
| GO:0003735 | IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT5G16130 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G16130 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G16130 |
| GO:0022627 | ISO | PLAZA Integrative Orthology | cytosolic small ribosomal subunit | AT5G16130 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT5G16130 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G16130 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G02560 |
| GO:0005730 | IEA | GOA Database | nucleolus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.3.1.8 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS7 |