Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 1.4e-175 619.8 386 100.0
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 2.2e-168 595.9 386 90.9
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 2.1e-142 509.6 407 79.6
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 2.2e-131 473.0 441 68.5
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 2.0e-121 439.9 458 63.5
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 1.5e-108 397.1 438 65.3
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 1.4e-106 390.6 628 47.1
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 1.8e-93 347.1 389 58.9
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 3.1e-93 346.3 431 53.8
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 2.6e-92 343.2 424 56.8
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 2.6e-92 343.2 416 55.5
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 4.4e-92 342.4 428 53.5
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 1.1e-87 327.8 443 50.6
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 1.1e-87 327.8 423 53.0
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 1.9e-87 327.0 443 49.9
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 2.8e-86 323.2 427 52.2
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 4.7e-86 322.4 394 59.6
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 6.2e-86 322.0 387 54.5
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 6.9e-85 318.5 418 57.2
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 9.0e-85 318.2 460 55.4
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 1.2e-84 317.8 418 57.2
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 1.2e-84 317.8 418 58.4
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 2.6e-84 316.6 399 60.2
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 4.4e-84 315.8 442 50.0
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 7.6e-84 315.1 410 55.1
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 1.7e-83 313.9 419 53.2
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 1.7e-83 313.9 423 51.1
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 3.8e-83 312.8 421 59.4
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 3.8e-83 312.8 421 59.4
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 4.9e-83 312.4 404 52.7
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 4.9e-83 312.4 413 55.4
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 6.4e-83 312.0 410 52.0
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 1.4e-82 310.8 469 51.4
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 1.4e-82 310.8 446 52.9
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 2.7e-81 306.6 491 47.5
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 3.0e-80 303.1 425 52.9
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 8.7e-80 301.6 430 52.1
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 1.1e-79 301.2 479 45.3
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 1.5e-79 300.8 450 52.0
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 2.5e-79 300.1 450 51.8
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 3.3e-79 299.7 422 56.9
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 4.3e-79 299.3 453 55.4
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 6.2e-78 295.4 453 47.5
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 1.4e-77 294.3 450 51.6
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 1.4e-77 294.3 453 47.2
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 1.4e-77 294.3 478 44.8
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 1.4e-77 294.3 392 53.6
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 3.1e-77 293.1 441 51.5
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 5.3e-77 292.4 437 50.8
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 9.0e-77 291.6 414 52.7
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 1.2e-76 291.2 424 54.5
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 2.0e-76 290.4 453 51.0
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 2.6e-76 290.0 498 53.0
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 1.7e-75 287.3 503 43.3
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 2.2e-75 287.0 431 52.4
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 2.2e-75 287.0 508 44.5
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 2.9e-75 286.6 468 53.2
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 3.8e-75 286.2 403 53.3
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 1.9e-74 283.9 471 44.8
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 1.9e-74 283.9 471 44.8
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 3.2e-74 283.1 447 51.7
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 5.4e-74 282.3 451 50.6
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 5.4e-74 282.3 449 49.7
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 5.4e-74 282.3 488 42.8
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 2.1e-73 280.4 478 50.6
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 2.7e-73 280.0 464 53.0
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 1.0e-72 278.1 571 40.5
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 5.1e-72 275.8 444 49.3
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 1.5e-71 274.2 468 44.7
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 3.3e-71 273.1 469 48.8
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 5.6e-71 272.3 422 52.4
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 1.8e-69 267.3 511 45.4
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 2.4e-69 266.9 510 43.3
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 9.0e-69 265.0 555 41.6
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 9.0e-69 265.0 574 44.3
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 1.5e-68 264.2 495 45.5
CsaV3_4G004310 Cucumis sativus L. HOM05D005328 ORTHO05D006049 2.6e-68 263.5 430 53.5
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 3.4e-68 263.1 513 43.3
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 1.3e-67 261.2 535 43.0
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 2.2e-67 260.4 542 42.6
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 3.2e-66 256.5 549 38.8
ClCG07G017100 Citrullus lanatus HOM05D005328 ORTHO05D006049 4.2e-66 256.1 436 48.2
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 2.1e-65 253.8 503 44.1
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 1.0e-64 251.5 534 45.3
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 1.0e-64 251.5 552 42.0
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.3e-64 251.1 582 38.7
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 1.3e-64 251.1 521 39.5
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 2.3e-64 250.4 483 42.2
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 7.4e-63 245.4 603 38.8
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 2.1e-62 243.8 623 36.4
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 2.1e-62 243.8 609 36.3
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 2.1e-62 243.8 623 36.4
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 4.0e-61 239.6 623 37.4
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 1.7e-59 234.2 535 40.2
THA.LOC104798630 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 6.5e-59 232.3 223 64.1
DCAR_022839 Daucus carota HOM05D005328 ORTHO05D006049 1.2e-57 228.0 171 76.6
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 2.7e-57 226.9 513 41.3
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 1.8e-56 224.2 521 40.5
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 6.7e-56 222.2 171 72.5
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 2.0e-52 210.7 552 38.2
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 5.0e-51 206.1 171 67.3
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.1e-50 204.9 413 41.4
AagrBONN_evm.TU.Sc2ySwM_228.5016 Anthoceros agrestis HOM05D005328 ORTHO05D006049 3.2e-50 203.4 188 62.8
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 3.1e-45 186.8 401 42.4
Prupe.1G162300 Prunus persica HOM05D005328 ORTHO05D006049 9.7e-39 165.2 316 51.3
Mapoly0104s0032 Marchantia polymorpha HOM05D005328 ORTHO05D006049 7.0e-37 159.1 185 53.0
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 7.0e-37 159.1 507 35.5
Carub.0004s2677 Capsella rubella HOM05D005328 ORTHO05D006049 2.6e-36 157.1 161 60.9
CBR_g2953 Chara braunii HOM05D005328 ORTHO05D006049 1.0e-35 155.2 177 54.2
CDE06G1717 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 8.5e-35 152.1 89 88.8
AUR62016005 Chenopodium quinoa HOM05D005328 ORTHO05D006049 1.4e-34 151.4 89 88.8
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 2.5e-34 150.6 351 37.9
ATR0751G077 Amborella trichopoda HOM05D005328 ORTHO05D006049 2.1e-33 147.5 105 79.0
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 2.7e-33 147.1 364 38.2
AT2G44195 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 5.2e-32 142.9 152 59.2
QL05p065813 Quercus lobata HOM05D005328 ORTHO05D006049 1.5e-31 141.4 82 90.2
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 1.7e-27 127.9 299 48.8
Zm00001eb097520 Zea mays HOM05D005328 ORTHO05D006049 6.1e-25 119.4 104 64.4
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 1.4e-21 108.2 142 52.1
Cre01.g021400 Chlamydomonas reinhardtii HOM05D005328 ORTHO05D006049 2.2e-19 100.9 179 35.8
DCAR_022842 Daucus carota HOM05D005328 ORTHO05D006049 5.0e-19 99.8 130 52.3
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.1e-18 98.6 361 35.7
SMO246G0007 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.1e-18 98.6 63 81.0
TAR371G0561 Trochodendron aralioides HOM05D005328 ORTHO05D006049 9.4e-18 95.5 67 76.1
AL4G43150 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 2.1e-17 94.4 155 45.8
VMungo1383G0559 Vigna mungo HOM05D005328 ORTHO05D006049 2.3e-16 90.9 53 86.8
CDE06G0152 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 1.2e-15 88.6 102 53.9
PRCOL_00001794 Prasinoderma coloniale HOM05D005328 ORTHO05D006049 4.4e-15 86.7 179 35.2
Actinidia26768 Actinidia chinensis HOM05D005328 ORTHO05D006049 1.0e-11 75.5 67 65.7
SMO117G0022 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 7.2e-10 69.3 98 39.8
Haze_07067 Corylus avellana HOM05D005328 ORTHO05D006049 1.6e-09 68.2 155 40.6
MCO07G343 Micromonas commoda HOM05D005328 ORTHO05D006049 1.8e-08 64.7 153 32.7
SMO117G0182 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 8.9e-08 62.4 70 45.7
Cfa024420 Carpinus fangiana HOM05D005328 ORTHO05D006049 3.4e-07 60.5 185 30.3
SMO117G0245 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.7e-06 58.2 59 44.1
Potri.016G000501 Populus trichocarpa HOM05D005328 ORTHO05D006049 6.3e-06 56.2 62 62.9


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