Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002783g0030 Nicotiana tabacum HOM05D007256 ORTHO05D009109 6.7e-89 330.5 149 100.0
Peaxi162Scf00357g00431 Petunia axillaris HOM05D007256 ORTHO05D009109 1.7e-76 289.3 150 86.7
Solyc01g100990.3 Solanum lycopersicum HOM05D007256 ORTHO05D009109 6.1e-74 280.8 151 84.8
Sopen01g044450 Solanum pennellii HOM05D007256 ORTHO05D009109 1.5e-72 276.2 151 83.4
Nitab4.5_0005710g0050 Nicotiana tabacum HOM05D007256 ORTHO05D009109 1.3e-71 273.1 149 84.6
CAN.G1374.8 Capsicum annuum HOM05D007256 ORTHO05D009109 2.3e-68 262.3 149 79.9
PGSC0003DMG400002748 Solanum tuberosum HOM05D007256 ORTHO05D009109 3.8e-68 261.5 149 80.5
Nn4g25434 Nelumbo nucifera HOM05D007256 ORTHO05D009109 1.3e-55 219.9 155 65.8
TAR362G0938 Trochodendron aralioides HOM05D007256 ORTHO05D009109 6.6e-52 207.6 154 63.6
GSVIVG01031300001 Vitis vinifera HOM05D007256 ORTHO05D009109 6.6e-52 207.6 155 63.9
Oeu060662.1 Olea europaea HOM05D007256 ORTHO05D009109 8.6e-52 207.2 161 60.2
Hma1.2p1_0052F.1_g030520 Hydrangea macrophylla HOM05D007256 ORTHO05D009109 8.3e-47 190.7 156 57.1
MSTRG.20366 Avicennia marina HOM05D007256 ORTHO05D009109 1.1e-46 190.3 160 58.1
Cc02_g35540 Coffea canephora HOM05D007256 ORTHO05D009109 1.1e-46 190.3 161 60.9
PSO210G0513 Papaver somniferum HOM05D007256 ORTHO05D009109 4.1e-46 188.3 156 58.3
PSO761G0366 Papaver somniferum HOM05D007256 ORTHO05D009109 4.1e-46 188.3 156 57.7
AUR62006795 Chenopodium quinoa HOM05D007256 ORTHO05D009109 9.2e-46 187.2 150 61.3
Zm00001eb333750 Zea mays HOM05D007256 ORTHO05D009109 9.2e-46 187.2 167 54.5
CANSAT54G0501 Cannabis sativa HOM05D007256 ORTHO05D009109 1.6e-45 186.4 154 57.8
CiPaw.07G034000 Carya illinoinensis HOM05D007256 ORTHO05D009109 1.6e-45 186.4 152 58.6
Haze_04019 Corylus avellana HOM05D007256 ORTHO05D009109 1.6e-45 186.4 154 59.1
Cfa006739 Carpinus fangiana HOM05D007256 ORTHO05D009109 2.0e-45 186.0 151 60.3
QL03p009011 Quercus lobata HOM05D007256 ORTHO05D009109 2.0e-45 186.0 156 59.0
Ciclev10012993m.g Citrus clementina HOM05D007256 ORTHO05D009109 2.7e-45 185.7 159 57.9
Aqoxy2G02591 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 3.5e-45 185.3 150 60.7
Prupe.6G307100 Prunus persica HOM05D007256 ORTHO05D009109 4.6e-45 184.9 155 57.4
QL03p009202 Quercus lobata HOM05D007256 ORTHO05D009109 6.0e-45 184.5 156 58.3
ECA238G0534 Erigeron canadensis HOM05D007256 ORTHO05D009109 7.8e-45 184.1 161 57.8
SalBow7G1589 Salvia bowleyana HOM05D007256 ORTHO05D009109 1.0e-44 183.7 178 54.5
SGA_v2.0_scaffold438G51636 Striga asiatica HOM05D007256 ORTHO05D009109 1.0e-44 183.7 154 56.5
Migut.B00859 Erythranthe guttata HOM05D007256 ORTHO05D009109 1.7e-44 183.0 154 59.7
RcHm_v2.0_Chr3g0458031 Rosa chinensis HOM05D007256 ORTHO05D009109 1.7e-44 183.0 162 54.9
FvH4_6g08160 Fragaria vesca HOM05D007256 ORTHO05D009109 3.0e-44 182.2 151 57.6
CsaV3_1G037970 Cucumis sativus L. HOM05D007256 ORTHO05D009109 8.6e-44 180.6 157 53.5
HanXRQChr14g0433581 Helianthus annuus HOM05D007256 ORTHO05D009109 8.6e-44 180.6 150 60.0
FAN09G0386 Fragaria x ananassa HOM05D007256 ORTHO05D009109 1.1e-43 180.3 154 56.5
Lsat_1_v5_gn_2_17440 Lactuca sativa HOM05D007256 ORTHO05D009109 7.3e-43 177.6 149 57.7
ClCG03G017800 Citrullus lanatus HOM05D007256 ORTHO05D009109 9.5e-43 177.2 155 54.2
FAN02G0906 Fragaria x ananassa HOM05D007256 ORTHO05D009109 9.5e-43 177.2 154 55.8
Eucgr.B01795 Eucalyptus grandis HOM05D007256 ORTHO05D009109 1.2e-42 176.8 153 56.9
DCAR_002110 Daucus carota HOM05D007256 ORTHO05D009109 2.8e-42 175.6 150 55.3
COL.COLO4_05498 Corchorus olitorius HOM05D007256 ORTHO05D009109 3.6e-42 175.3 149 56.4
FAN14G3866 Fragaria x ananassa HOM05D007256 ORTHO05D009109 3.6e-42 175.3 156 55.1
Duzib177G1002 Durio zibethinus HOM05D007256 ORTHO05D009109 6.2e-42 174.5 151 56.3
Thecc.05G327400 Theobroma cacao HOM05D007256 ORTHO05D009109 6.2e-42 174.5 157 56.1
Gohir.A13G030200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 8.1e-42 174.1 152 57.2
QL03p009259 Quercus lobata HOM05D007256 ORTHO05D009109 1.8e-41 172.9 156 57.1
Gohir.D13G028200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 2.3e-41 172.6 152 57.2
Gorai.013G032200 Gossypium raimondii HOM05D007256 ORTHO05D009109 2.3e-41 172.6 152 57.2
TWI12G0874 Tripterygium wilfordii HOM05D007256 ORTHO05D009109 3.1e-41 172.2 162 54.9
Duzib177G0019 Durio zibethinus HOM05D007256 ORTHO05D009109 4.0e-41 171.8 156 53.8
Atru.chr12.1603 Acer truncatum HOM05D007256 ORTHO05D009109 5.2e-41 171.4 180 51.1
Manes.08G108700 Manihot esculenta HOM05D007256 ORTHO05D009109 8.9e-41 170.6 165 52.7
Potri.013G004801 Populus trichocarpa HOM05D007256 ORTHO05D009109 8.9e-41 170.6 160 51.2
EL10Ac4g09530 Beta vulgaris HOM05D007256 ORTHO05D009109 1.2e-40 170.2 153 54.9
Hund07289 Selenicereus undatus HOM05D007256 ORTHO05D009109 1.5e-40 169.9 235 41.3
unitig_699.g19800 Utricularia gibba HOM05D007256 ORTHO05D009109 2.0e-40 169.5 185 49.7
CDE08G0276 Ceratophyllum demersum HOM05D007256 ORTHO05D009109 1.3e-39 166.8 149 55.7
Os01g0252200 Oryza sativa ssp. japonica HOM05D007256 ORTHO05D009109 1.7e-39 166.4 168 50.6
TPR.G2616 Trifolium pratense HOM05D007256 ORTHO05D009109 6.4e-39 164.5 144 54.2
Sabra13G0003900 Salix brachista HOM05D007256 ORTHO05D009109 8.3e-39 164.1 159 50.3
MELO3C015247.2 Cucumis melo HOM05D000487 ORTHO05D000405 1.9e-38 162.9 153 51.6
MD12G1202300 Malus domestica HOM05D007256 ORTHO05D009109 1.2e-37 160.2 149 53.7
Ca_10190_v3 Cicer arietinum L. HOM05D007256 ORTHO05D009109 6.0e-37 157.9 149 50.3
AL6G38610 Arabidopsis lyrata HOM05D007256 ORTHO05D009109 1.7e-36 156.4 153 51.6
Glyma.10G144700 Glycine max HOM05D007256 ORTHO05D009109 2.3e-36 156.0 149 55.0
Phvul.007G203900 Phaseolus vulgaris HOM05D007256 ORTHO05D009109 1.9e-35 152.9 152 52.0
SEGI_23053 Sequoiadendron giganteum HOM05D007256 ORTHO05D009109 2.5e-35 152.5 160 50.0
Lj5g0000046 Lotus japonicus HOM05D007256 ORTHO05D009109 5.6e-35 151.4 154 48.7
Lalb_Chr02g0147641 Lupinus albus HOM05D007256 ORTHO05D009109 7.3e-35 151.0 146 49.3
arahy.Tifrunner.gnm1.ann1.Q851GZ Arachis hypogaea HOM05D007256 ORTHO05D009109 1.6e-34 149.8 156 46.8
Thhalv10005088m.g Eutrema salsugineum HOM05D007256 ORTHO05D009109 1.6e-34 149.8 151 51.0
Gorai.001G184000 Gossypium raimondii HOM05D007256 ORTHO05D009109 1.6e-34 149.8 151 51.7
VMungo0720G0365 Vigna mungo HOM05D007256 ORTHO05D009109 2.1e-34 149.4 152 50.7
arahy.Tifrunner.gnm1.ann1.H7RZSB Arachis hypogaea HOM05D007256 ORTHO05D009109 2.8e-34 149.1 156 46.8
Sed0013353 Sechium edule HOM05D007256 ORTHO05D009109 3.6e-34 148.7 158 48.7
THA.LOC104821748 Tarenaya hassleriana HOM05D007256 ORTHO05D009109 3.6e-34 148.7 149 49.0
A09p05700 Brassica napus HOM05D007256 ORTHO05D009109 8.1e-34 147.5 152 48.0
TPR.G2644 Trifolium pratense HOM05D007256 ORTHO05D009109 8.1e-34 147.5 151 49.7
Psat1g134200 Pisum sativum HOM05D007256 ORTHO05D009109 1.8e-33 146.4 151 49.7
Medtr1g084750 Medicago truncatula HOM05D007256 ORTHO05D009109 5.2e-33 144.8 149 49.7
BcaB04g19715 Brassica carinata HOM05D007256 ORTHO05D009109 1.2e-32 143.7 157 49.7
BcaC04g23634 Brassica carinata HOM05D007256 ORTHO05D009109 2.0e-32 142.9 151 49.0
C09p06290 Brassica napus HOM05D007256 ORTHO05D009109 2.0e-32 142.9 151 49.0
Cpa.g.sc48.207 Carica papaya HOM05D007256 ORTHO05D009109 2.6e-32 142.5 149 50.3
AT5G26749 Arabidopsis thaliana HOM05D007256 ORTHO05D009109 7.6e-32 141.0 173 44.5
HPP92_001218 Vanilla planifolia HOM05D007256 ORTHO05D009109 1.3e-31 140.2 152 49.3
Aa31LG11G9900 Aethionema arabicum HOM05D007256 ORTHO05D009109 3.8e-31 138.7 158 48.7
Sc09g0002500 Simmondsia chinensis HOM05D007256 ORTHO05D009109 1.1e-30 137.1 94 66.0
Pp3c18_1910 Physcomitrium patens HOM05D007256 ORTHO05D009109 4.1e-30 135.2 150 47.3
BraA09t36210Z Brassica rapa HOM05D007256 ORTHO05D009109 2.1e-29 132.9 172 43.0
Sp2g21240 Schrenkiella parvula HOM05D007256 ORTHO05D009109 2.1e-29 132.9 152 47.4
ATR0693G354 Amborella trichopoda HOM05D007256 ORTHO05D009109 2.7e-29 132.5 80 70.0
BolC9t53549H Brassica oleracea HOM05D007256 ORTHO05D009109 6.0e-29 131.3 170 44.1
Mapoly0054s0011 Marchantia polymorpha HOM05D007256 ORTHO05D009109 1.2e-26 123.6 153 41.8
vmacro19770 Vaccinium macrocarpon HOM05D007256 ORTHO05D009109 4.7e-26 121.7 241 33.2
FAN05G3272 Fragaria x ananassa HOM05D000487 ORTHO05D000405 9.0e-25 117.5 117 51.3
Gohir.D01G139700 Gossypium hirsutum HOM05D007256 ORTHO05D009109 2.9e-23 112.5 123 48.8
Carub.0006s2440 Capsella rubella HOM05D007256 ORTHO05D009109 4.2e-22 108.6 90 56.7
PGR042G2181 Punica granatum HOM05D007256 ORTHO05D009109 1.3e-20 103.6 120 47.5
Ah.10g027130 Amaranthus hybridus HOM05D007256 ORTHO05D009109 1.7e-20 103.2 69 66.7
Rhsim05G0121300 Rhododendron simsii HOM05D007256 ORTHO05D009109 2.5e-19 99.4 70 65.7
Aqoxy4G00797 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 3.6e-18 95.5 149 38.9
HPP92_001189 Vanilla planifolia HOM05D007256 ORTHO05D009109 5.4e-14 81.6 44 75.0
Nitab4.5_0000185g0380 Nicotiana tabacum HOM05D007256 ORTHO05D009109 1.2e-13 80.5 112 42.9
CARHR186830 Cardamine hirsuta HOM05D007256 ORTHO05D009109 6.7e-12 74.7 41 78.0
SHI06526 Sapria himalayana HOM05D007256 ORTHO05D009109 1.9e-11 73.2 43 65.1
Glyma.20G093702 Glycine max HOM05D007256 ORTHO05D009109 8.1e-10 67.8 68 47.1
Gohir.D01G148000 Gossypium hirsutum HOM05D002544 ORTHO05D009109 1.5e-08 63.5 71 49.3
Cc02_g35520 Coffea canephora HOM05D007256 ORTHO05D009109 2.2e-07 59.7 50 62.0


User provided reference genes

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