Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 1.2e-194 682.9 338 100.0
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 1.3e-183 646.4 334 96.1
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 2.9e-164 582.0 334 85.9
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 2.6e-160 568.9 355 80.6
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 1.7e-159 566.2 364 79.4
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 6.3e-159 564.3 329 86.3
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 1.2e-114 417.2 337 63.8
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 2.3e-108 396.4 329 60.2
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 1.1e-102 377.5 336 58.0
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 2.4e-102 376.3 333 57.7
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 1.6e-101 373.6 335 58.8
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 3.9e-100 369.0 336 57.4
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 1.5e-99 367.1 330 58.5
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 1.5e-99 367.1 335 59.1
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 3.3e-99 365.9 337 57.6
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 5.6e-99 365.2 332 55.4
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 9.5e-99 364.4 332 56.3
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 3.6e-98 362.5 338 57.7
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 1.4e-97 360.5 335 58.8
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 2.0e-96 356.7 329 57.8
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 2.0e-96 356.7 336 54.8
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 4.4e-96 355.5 311 58.8
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 4.4e-96 355.5 338 57.4
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 2.9e-95 352.8 338 54.7
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 2.9e-95 352.8 337 57.0
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 1.1e-94 350.9 337 55.5
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 5.4e-94 348.6 335 55.8
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 1.2e-93 347.4 333 57.1
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 4.6e-93 345.5 337 55.8
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 2.3e-92 343.2 337 55.5
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 1.1e-91 340.9 320 58.8
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 1.1e-91 340.9 352 55.4
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 1.1e-91 340.9 360 53.3
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 5.6e-91 338.6 335 52.8
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 5.6e-91 338.6 336 54.8
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 1.6e-90 337.0 337 52.8
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 3.6e-90 335.9 336 54.2
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 3.1e-89 332.8 334 55.4
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 1.2e-88 330.9 335 55.5
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 2.0e-88 330.1 336 54.2
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 3.4e-88 329.3 337 53.1
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 3.4e-88 329.3 334 54.8
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 5.8e-88 328.6 336 52.7
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 7.6e-88 328.2 336 53.0
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.8e-87 325.9 333 54.1
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 3.8e-87 325.9 332 53.6
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 6.4e-87 325.1 341 51.6
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 8.4e-87 324.7 334 54.2
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 1.4e-86 323.9 337 51.3
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.4e-86 323.9 334 53.3
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 3.2e-86 322.8 328 53.7
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 5.4e-86 322.0 334 53.0
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 7.1e-86 321.6 384 47.1
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 1.2e-85 320.9 336 51.8
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 6.0e-85 318.5 336 50.9
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 1.1e-83 314.3 355 50.7
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 2.5e-83 313.2 329 52.0
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 2.5e-83 313.2 347 51.0
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 4.3e-83 312.4 336 48.8
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 1.6e-82 310.5 343 51.3
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 3.6e-82 309.3 333 51.1
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 4.8e-82 308.9 340 49.4
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 5.3e-81 305.4 276 60.9
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 6.9e-81 305.1 337 50.7
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 1.5e-80 303.9 334 51.5
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 9.9e-80 301.2 346 49.7
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 1.9e-78 297.0 329 49.8
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 4.6e-77 292.4 296 53.7
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 6.0e-77 292.0 311 50.2
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 1.5e-75 287.3 296 53.4
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 5.6e-75 285.4 335 46.9
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 1.8e-73 280.4 336 47.0
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 4.0e-73 279.3 333 49.5
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 7.6e-72 275.0 355 45.9
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 2.9e-71 273.1 355 45.6
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 4.9e-71 272.3 336 46.1
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 1.4e-70 270.8 311 48.9
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 9.3e-70 268.1 330 46.4
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 9.3e-70 268.1 338 45.9
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 1.6e-69 267.3 310 48.7
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 2.7e-69 266.5 311 47.9
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 4.6e-69 265.8 344 44.8
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 1.3e-68 264.2 203 64.5
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 3.9e-68 262.7 360 46.7
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 8.7e-68 261.5 329 47.4
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 1.9e-67 260.4 263 51.7
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 9.6e-67 258.1 311 46.3
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 9.6e-67 258.1 311 46.3
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 1.6e-66 257.3 334 47.0
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 2.1e-66 256.9 341 46.0
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 2.8e-66 256.5 310 46.8
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 1.4e-65 254.2 312 47.1
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 4.0e-65 252.7 330 44.8
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 9.0e-65 251.5 207 59.4
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 2.6e-64 250.0 265 50.6
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 1.3e-63 247.7 314 46.2
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 3.2e-62 243.0 253 51.8
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 1.6e-61 240.7 272 47.4
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 2.1e-61 240.4 335 43.0
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 1.3e-60 237.7 268 48.1
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 2.3e-60 236.9 300 46.3
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 1.6e-58 230.7 251 49.0
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 6.3e-58 228.8 202 59.4
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 4.1e-57 226.1 282 46.8
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 3.8e-55 219.5 242 49.6
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 8.2e-50 201.8 210 51.0
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 2.0e-48 197.2 191 54.5
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.9e-47 193.4 203 49.8
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 3.9e-44 183.0 202 48.0
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 3.9e-44 183.0 191 50.8
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 1.5e-43 181.0 198 53.0
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 7.4e-43 178.7 202 47.5
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 6.3e-42 175.6 206 48.1
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 1.4e-41 174.5 208 45.2
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 1.2e-40 171.4 136 64.0
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.3e-39 167.9 144 58.3
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.9e-39 166.8 206 44.7
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 1.4e-36 157.9 191 43.5
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 2.3e-36 157.1 142 55.6
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 2.3e-36 157.1 208 44.2
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 3.8e-31 139.8 127 54.3
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 1.7e-26 124.4 179 41.3
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 2.5e-22 110.5 80 67.5
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 3.1e-17 93.6 212 32.5
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 4.5e-16 89.7 87 56.3
Cre01.g021850 Chlamydomonas reinhardtii HOM05D005236 ORTHO05D006557 3.6e-13 80.1 184 34.8


User provided reference genes

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