Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 4.5e-197 691.0 341 100.0
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 1.7e-159 566.2 337 86.6
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 4.7e-154 548.1 333 84.4
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 1.0e-153 547.0 333 84.4
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 3.0e-153 545.4 333 83.8
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 2.9e-151 538.9 333 83.5
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 1.4e-150 536.6 333 82.6
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 8.3e-135 484.2 335 74.9
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 3.2e-134 482.3 345 72.8
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 3.2e-134 482.3 333 75.1
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 7.1e-134 481.1 333 74.2
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 2.1e-133 479.6 333 73.6
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 3.9e-132 475.3 335 72.5
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 9.5e-131 470.7 327 73.4
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 9.5e-131 470.7 333 72.7
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 1.2e-130 470.3 327 72.2
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 1.6e-130 469.9 333 72.7
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 1.6e-130 469.9 336 72.9
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 2.1e-130 469.5 333 72.4
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 6.2e-130 468.0 366 68.0
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 8.1e-130 467.6 327 74.6
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 2.3e-129 466.1 334 71.9
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 3.1e-129 465.7 333 70.9
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 3.1e-129 465.7 333 71.2
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 4.0e-129 465.3 332 71.7
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 1.5e-128 463.4 327 71.6
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 2.6e-128 462.6 344 70.3
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 2.6e-128 462.6 334 70.7
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 2.6e-128 462.6 327 70.6
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 3.4e-128 462.2 334 71.9
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 3.4e-128 462.2 333 70.9
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 3.4e-128 462.2 332 71.7
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 4.4e-128 461.8 333 72.1
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 7.6e-128 461.1 327 71.6
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 9.9e-128 460.7 334 72.2
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 1.3e-127 460.3 333 70.6
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 1.3e-127 460.3 334 70.7
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 2.2e-127 459.5 335 71.0
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 2.9e-127 459.1 327 71.9
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 3.7e-127 458.8 334 70.4
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 6.4e-127 458.0 333 68.8
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 8.4e-127 457.6 333 69.1
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 8.4e-127 457.6 333 70.0
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 1.4e-126 456.8 333 69.1
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 4.1e-126 455.3 332 69.0
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 7.1e-126 454.5 330 70.9
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 1.6e-125 453.4 333 71.5
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 4.6e-125 451.8 333 70.6
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 1.7e-124 449.9 329 70.2
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 2.3e-124 449.5 341 68.3
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 2.3e-124 449.5 334 68.9
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 3.9e-124 448.7 333 68.5
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 3.9e-124 448.7 333 69.1
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 5.1e-124 448.4 334 68.6
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 1.1e-123 447.2 333 68.8
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 1.1e-123 447.2 336 68.2
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 2.5e-123 446.0 330 68.8
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 3.3e-123 445.7 325 70.2
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 7.3e-123 444.5 328 70.7
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 1.2e-122 443.7 364 64.3
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 2.1e-122 443.0 333 69.1
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 2.8e-122 442.6 330 68.5
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 2.4e-121 439.5 334 67.4
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 3.1e-121 439.1 333 69.4
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 4.0e-121 438.7 332 67.5
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 5.8e-120 434.9 317 72.6
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 7.6e-120 434.5 333 68.8
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 1.7e-119 433.3 317 69.1
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 1.4e-118 430.3 326 66.3
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 1.9e-118 429.9 333 64.9
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 2.4e-118 429.5 326 66.3
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 7.1e-118 427.9 326 65.3
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 2.1e-117 426.4 326 64.4
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 1.0e-116 424.1 326 65.3
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 1.0e-116 424.1 326 65.3
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 1.0e-116 424.1 326 65.3
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 1.0e-116 424.1 326 65.0
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 1.3e-116 423.7 326 64.7
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 6.6e-116 421.4 333 67.0
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 1.1e-115 420.6 330 67.9
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 2.5e-115 419.5 333 63.7
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 4.3e-115 418.7 274 76.6
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 9.6e-115 417.5 333 64.0
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 9.6e-115 417.5 328 64.9
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 8.1e-114 414.5 329 66.0
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 2.4e-113 412.9 346 63.6
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 5.3e-113 411.8 307 70.0
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 3.8e-111 405.6 284 71.8
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 1.1e-110 404.1 303 70.6
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 4.6e-109 398.7 272 73.2
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 1.0e-108 397.5 304 67.8
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 1.6e-106 390.2 302 66.2
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 1.2e-104 384.0 266 72.6
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 2.2e-103 379.8 326 60.1
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 8.4e-103 377.9 282 70.6
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 7.9e-101 371.3 257 71.6
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 4.6e-93 345.5 273 64.8
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 5.5e-86 322.0 318 53.5
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 2.3e-84 316.6 319 52.4
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 6.7e-84 315.1 317 59.0
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 9.7e-83 311.2 323 50.8
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 7.9e-77 291.6 445 43.4
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 3.9e-76 289.3 243 60.5
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 9.4e-62 241.5 304 46.1
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 6.1e-61 238.8 158 74.7
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 4.4e-51 206.1 119 83.2
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 5.7e-51 205.7 293 47.4
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 2.4e-49 200.3 321 35.5
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 5.4e-49 199.1 281 39.9
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 1.7e-47 194.1 192 54.7
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 9.5e-46 188.3 152 59.2
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 3.3e-38 163.3 253 41.9
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 9.8e-35 151.8 210 45.2
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 2.4e-33 147.1 269 36.1
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 8.0e-29 132.1 146 50.7
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 2.6e-27 127.1 82 78.0
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 2.2e-26 124.0 73 80.8
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 2.6e-19 100.5 52 90.4
SEGI_12669 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 2.2e-18 97.4 54 83.3
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 3.2e-17 93.6 60 75.0
Psat4g071240 Pisum sativum HOM05D005598 ORTHO05D006587 2.1e-16 90.9 213 33.8
MBI01_g19134_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 5.1e-15 86.3 47 83.0
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 8.6e-15 85.5 52 75.0
Lalb_Chr21g0309141 Lupinus albus HOM05D005598 ORTHO05D006587 1.4e-12 78.2 46 80.4
Cre13.g561900 Chlamydomonas reinhardtii HOM05D016613 ORTHO05D014817 2.4e-09 67.4 162 33.3
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 4.1e-09 66.6 168 29.8
Sabra10G0187600 Salix brachista HOM05D005598 ORTHO05D006587 9.2e-09 65.5 94 41.5
Mapoly0023s0164 Marchantia polymorpha HOM05D016613 ORTHO05D014817 4.6e-08 63.2 186 30.1
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 1.7e-07 61.2 65 52.3
Pp3c2_19600 Physcomitrium patens HOM05D016613 ORTHO05D014817 1.7e-07 61.2 164 29.3
ClCG05G021840 Citrullus lanatus HOM05D005598 ORTHO05D006587 2.3e-07 60.8 81 45.7
MCO01G455 Micromonas commoda HOM05D016613 ORTHO05D014817 3.0e-07 60.5 166 30.1
Lsat_1_v5_gn_5_43780 Lactuca sativa HOM05D005598 ORTHO05D008354 5.1e-07 59.7 42 64.3
BolC8t51460H Brassica oleracea HOM05D005598 ORTHO05D041141 1.9e-06 57.8 42 64.3
Lsat_1_v5_gn_3_11781 Lactuca sativa HOM05D000104 ORTHO05D008354 1.9e-06 57.8 54 51.9
Psat6g162040 Pisum sativum HOM05D005598 ORTHO05D006587 2.5e-06 57.4 82 45.1


User provided reference genes

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