Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002482g0010 Nicotiana tabacum HOM05D000104 ORTHO05D004363 2.7e-80 302.0 155 100.0
Solyc08g074520.2 Solanum lycopersicum HOM05D000104 ORTHO05D004363 2.0e-67 259.2 144 95.1
Sopen08g023150 Solanum pennellii HOM05D000104 ORTHO05D004363 2.0e-67 259.2 144 95.1
CAN.G195.25 Capsicum annuum HOM05D000104 ORTHO05D004363 4.9e-66 254.6 139 95.0
Peaxi162Scf00213g01732 Petunia axillaris HOM05D000104 ORTHO05D004363 4.3e-54 214.9 126 89.7
Manes.08G155800 Manihot esculenta HOM05D000104 ORTHO05D004363 9.5e-54 213.8 145 80.0
Thecc.05G236400 Theobroma cacao HOM05D000104 ORTHO05D004363 9.5e-54 213.8 145 79.3
TWI32G0549 Tripterygium wilfordii HOM05D000104 ORTHO05D004363 2.8e-53 212.2 146 74.7
Medtr4g035100 Medicago truncatula HOM05D000104 ORTHO05D004363 3.6e-53 211.8 147 78.2
Oeu007492.1 Olea europaea HOM05D000104 ORTHO05D004363 3.6e-53 211.8 142 81.0
Duzib128G0660 Durio zibethinus HOM05D000104 ORTHO05D004363 4.7e-53 211.5 145 79.3
TPR.G31923 Trifolium pratense HOM05D000104 ORTHO05D004363 8.1e-53 210.7 141 81.6
MSTRG.11830 Avicennia marina HOM05D000104 ORTHO05D004363 1.4e-52 209.9 142 78.2
Psat7g148080 Pisum sativum HOM05D000104 ORTHO05D004363 2.4e-52 209.1 141 80.9
COL.COLO4_33474 Corchorus olitorius HOM05D000104 ORTHO05D004363 3.1e-52 208.8 145 79.3
Ca_19676_v3 Cicer arietinum L. HOM05D000104 ORTHO05D004363 4.0e-52 208.4 141 80.9
Migut.A00510 Erythranthe guttata HOM05D000104 ORTHO05D004363 4.0e-52 208.4 137 78.8
Atru.chr2.1616 Acer truncatum HOM05D000104 ORTHO05D004363 5.2e-52 208.0 142 79.6
Prupe.6G000100 Prunus persica HOM05D000104 ORTHO05D004363 5.2e-52 208.0 141 78.0
Lalb_Chr01g0000141 Lupinus albus HOM05D000104 ORTHO05D004363 8.9e-52 207.2 141 79.4
CSS0023365 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D004363 1.2e-51 206.8 142 80.3
Duzib177G0255 Durio zibethinus HOM05D000104 ORTHO05D004363 1.5e-51 206.5 145 77.9
arahy.Tifrunner.gnm1.ann1.YM0GIL Arachis hypogaea HOM05D000104 ORTHO05D004363 2.6e-51 205.7 147 76.2
SGA_v2.0_scaffold447G51747 Striga asiatica HOM05D000104 ORTHO05D004363 4.4e-51 204.9 137 77.4
VMungo1127G2256 Vigna mungo HOM05D000104 ORTHO05D004363 4.4e-51 204.9 141 78.7
Actinidia03314 Actinidia chinensis HOM05D000104 ORTHO05D004363 9.9e-51 203.8 141 79.4
Ciclev10030472m.g Citrus clementina HOM05D000104 ORTHO05D004363 9.9e-51 203.8 142 78.9
Cc11_g04400 Coffea canephora HOM05D000104 ORTHO05D004363 9.9e-51 203.8 140 76.4
SGA_v2.0_scaffold269G46291 Striga asiatica HOM05D000104 ORTHO05D004363 9.9e-51 203.8 137 76.6
Gorai.013G197700 Gossypium raimondii HOM05D000104 ORTHO05D004363 1.3e-50 203.4 145 76.6
Lj3g0018732 Lotus japonicus HOM05D000104 ORTHO05D004363 1.3e-50 203.4 141 78.7
Gohir.A13G159800 Gossypium hirsutum HOM05D000104 ORTHO05D004363 1.7e-50 203.0 145 75.9
Dinv09441 Davidia involucrata HOM05D000104 ORTHO05D004363 2.2e-50 202.6 142 78.9
Glyma.12G002300 Glycine max HOM05D000104 ORTHO05D004363 2.9e-50 202.2 141 77.3
Potri.013G068400 Populus trichocarpa HOM05D000104 ORTHO05D004363 2.9e-50 202.2 145 76.6
RcHm_v2.0_Chr5g0084181 Rosa chinensis HOM05D000104 ORTHO05D004363 2.9e-50 202.2 144 75.7
Dinv37465 Davidia involucrata HOM05D000104 ORTHO05D004363 3.8e-50 201.8 142 77.5
Hma1.2p1_0268F.1_g107680 Hydrangea macrophylla HOM05D000104 ORTHO05D004363 3.8e-50 201.8 152 72.4
SalBow4G3014 Salvia bowleyana HOM05D000104 ORTHO05D004363 6.4e-50 201.1 142 76.8
vmacro00211 Vaccinium macrocarpon HOM05D000104 ORTHO05D004363 6.4e-50 201.1 137 78.1
Gohir.D13G165000 Gossypium hirsutum HOM05D000104 ORTHO05D004363 8.4e-50 200.7 145 75.9
Phvul.011G002900 Phaseolus vulgaris HOM05D000104 ORTHO05D004363 8.4e-50 200.7 141 76.6
PGR083G0814 Punica granatum HOM05D000104 ORTHO05D004363 8.4e-50 200.7 145 71.7
arahy.Tifrunner.gnm1.ann1.64GWQS Arachis hypogaea HOM05D000104 ORTHO05D004363 1.1e-49 200.3 147 74.8
SGA_v2.0_scaffold27G11711 Striga asiatica HOM05D000104 ORTHO05D004363 1.1e-49 200.3 142 76.1
GSVIVG01019359001 Vitis vinifera HOM05D000104 ORTHO05D004363 1.1e-49 200.3 153 73.2
FvH4_3g46101 Fragaria vesca HOM05D000104 ORTHO05D004363 1.4e-49 199.9 144 75.0
MD03G1000600 Malus domestica HOM05D000104 ORTHO05D004363 5.4e-49 198.0 141 72.3
Thhalv10010052m.g Eutrema salsugineum HOM05D000104 ORTHO05D004363 7.1e-49 197.6 146 74.7
FAN21G1945 Fragaria x ananassa HOM05D000104 ORTHO05D004363 7.1e-49 197.6 144 73.6
Glyma.09G234400 Glycine max HOM05D000104 ORTHO05D004363 7.1e-49 197.6 141 75.9
Sp5g08110 Schrenkiella parvula HOM05D000104 ORTHO05D004363 7.1e-49 197.6 146 74.7
Nitab4.5_0001131g0020 Nicotiana tabacum HOM05D000104 ORTHO05D004363 9.2e-49 197.2 117 88.9
Cfa017683 Carpinus fangiana HOM05D000104 ORTHO05D004363 2.1e-48 196.1 141 74.5
MD11G1000100 Malus domestica HOM05D000104 ORTHO05D004363 2.1e-48 196.1 141 73.8
PSO832G0838 Papaver somniferum HOM05D000104 ORTHO05D004363 3.5e-48 195.3 143 76.2
Carub.0005s2087 Capsella rubella HOM05D000104 ORTHO05D004363 6.0e-48 194.5 146 74.0
Eucgr.D01125 Eucalyptus grandis HOM05D000104 ORTHO05D004363 7.8e-48 194.1 141 70.9
CARHR164200 Cardamine hirsuta HOM05D000104 ORTHO05D004363 1.3e-47 193.4 145 73.8
AT3G54280 Arabidopsis thaliana HOM05D000104 ORTHO05D004363 1.7e-47 193.0 146 73.3
Nn3g17003 Nelumbo nucifera HOM05D000104 ORTHO05D004363 5.1e-47 191.4 143 72.7
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 5.1e-47 191.4 139 73.4
A09p47280 Brassica napus HOM05D000104 ORTHO05D004363 1.1e-46 190.3 144 72.9
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 1.1e-46 190.3 142 73.2
AL5G35320 Arabidopsis lyrata HOM05D000104 ORTHO05D004363 1.5e-46 189.9 146 72.6
C08p29510 Brassica napus HOM05D000104 ORTHO05D004363 7.3e-46 187.6 144 72.2
BolC8t50557H Brassica oleracea HOM05D000104 ORTHO05D004363 7.3e-46 187.6 144 72.2
THA.LOC104819143 Tarenaya hassleriana HOM05D000104 ORTHO05D004363 9.6e-46 187.2 143 72.0
Aa31sc392G40 Aethionema arabicum HOM05D000104 ORTHO05D004363 1.3e-45 186.8 143 72.7
BraA09t40189Z Brassica rapa HOM05D000104 ORTHO05D004363 1.6e-45 186.4 138 73.2
BcaC02g09076 Brassica carinata HOM05D000104 ORTHO05D004363 2.1e-45 186.0 143 71.3
ClCG05G011380 Citrullus lanatus HOM05D000104 ORTHO05D004363 2.8e-45 185.7 136 71.3
Lsat_1_v5_gn_5_59321 Lactuca sativa HOM05D000104 ORTHO05D004363 2.8e-45 185.7 137 73.7
CANSAT35G1590 Cannabis sativa HOM05D000104 ORTHO05D004363 4.8e-45 184.9 144 69.4
Sed0011777 Sechium edule HOM05D000104 ORTHO05D004363 1.4e-44 183.3 143 68.5
HanXRQChr03g0082351 Helianthus annuus HOM05D000104 ORTHO05D004363 2.4e-44 182.6 137 71.5
Aqoxy7G00075 Aquilegia oxysepala HOM05D000104 ORTHO05D004363 6.9e-44 181.0 152 68.4
ECA240G3782 Erigeron canadensis HOM05D000104 ORTHO05D004363 5.8e-43 177.9 137 71.5
MELO3C020235.2 Cucumis melo HOM05D000104 ORTHO05D004363 7.6e-43 177.6 136 69.1
CsaV3_3G021040 Cucumis sativus L. HOM05D000104 ORTHO05D004363 2.2e-42 176.0 136 68.4
CsaV3_4G017740 Cucumis sativus L. HOM05D000104 ORTHO05D004363 2.2e-42 176.0 136 68.4
SHI06790 Sapria himalayana HOM05D000190 ORTHO05D004363 6.4e-42 174.5 142 66.9
HPP92_015726 Vanilla planifolia HOM05D000104 ORTHO05D004363 3.2e-41 172.2 143 65.0
SEGI_24237 Sequoiadendron giganteum HOM05D000104 ORTHO05D004363 3.3e-38 162.2 143 62.9
CDE06G1340 Ceratophyllum demersum HOM05D000104 ORTHO05D004363 4.3e-38 161.8 143 61.5
C04p38170 Brassica napus HOM05D000104 ORTHO05D004363 5.6e-38 161.4 132 65.9
Zm00001eb297280 Zea mays HOM05D000104 ORTHO05D004363 1.3e-37 160.2 145 62.1
ATR0665G650 Amborella trichopoda HOM05D000104 ORTHO05D004363 1.4e-36 156.8 125 65.6
Sc05g0007890 Simmondsia chinensis HOM05D000104 ORTHO05D004363 2.6e-35 152.5 142 64.1
Hund23685 Selenicereus undatus HOM05D000104 ORTHO05D004363 4.5e-35 151.8 142 62.7
AUR62014777 Chenopodium quinoa HOM05D000104 ORTHO05D004363 2.2e-34 149.4 141 61.7
AUR62016963 Chenopodium quinoa HOM05D000104 ORTHO05D004363 2.9e-34 149.1 141 61.7
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.4e-33 146.7 122 63.1
Mapoly0038s0059 Marchantia polymorpha HOM05D000104 ORTHO05D004363 2.5e-30 136.0 143 54.5
Pp3c3_11220 Physcomitrium patens HOM05D000104 ORTHO05D004363 1.3e-29 133.7 142 53.5
AagrBONN_evm.TU.Sc2ySwM_228.1549 Anthoceros agrestis HOM05D000104 ORTHO05D004363 5.3e-28 128.3 144 49.3
Haze_20467 Corylus avellana HOM05D000104 ORTHO05D004363 3.4e-27 125.6 90 70.0
Ah.14g089210 Amaranthus hybridus HOM05D000104 ORTHO05D004363 4.5e-27 125.2 143 54.5
Lj7C413G9 Lonicera japonica HOM05D000104 ORTHO05D004363 2.2e-26 122.9 89 73.0
SMO223G0022 Selaginella moellendorffii HOM05D000104 ORTHO05D004363 3.8e-26 122.1 148 51.4
Rhsim03G0207500 Rhododendron simsii HOM05D000104 ORTHO05D004363 4.9e-26 121.7 260 36.2
unitig_92.g28135 Utricularia gibba HOM05D000104 ORTHO05D004363 1.6e-24 116.7 120 57.5
unitig_93.g30710 Utricularia gibba HOM05D000104 ORTHO05D004363 7.9e-24 114.4 103 60.2
CBR_g57043 Chara braunii HOM05D000104 ORTHO05D004363 2.8e-21 105.9 190 38.4
Sabra13G0059700 Salix brachista HOM05D000104 ORTHO05D004363 3.7e-21 105.5 112 57.1
MCO02G056 Micromonas commoda HOM05D000104 ORTHO05D004363 5.5e-17 91.7 144 37.5
Cre16.g687301 Chlamydomonas reinhardtii HOM05D000104 ORTHO05D004363 6.7e-15 84.7 140 38.6
BraA04t16249Z Brassica rapa HOM05D000104 ORTHO05D004363 3.1e-12 75.9 45 88.9
VMungo0464G1762 Vigna mungo HOM05D000001 ORTHO05D001247 1.8e-07 60.1 91 47.3


User provided reference genes

Program Settings