Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002399g0090 Nicotiana tabacum HOM05D000246 ORTHO05D009140 5.2e-218 760.8 388 100.0
Nitab4.5_0000539g0090 Nicotiana tabacum HOM05D000246 ORTHO05D009140 9.9e-201 703.4 439 85.0
CAN.G478.17 Capsicum annuum HOM05D000246 ORTHO05D009140 1.7e-184 649.4 442 77.4
Sopen09g012230 Solanum pennellii HOM05D000246 ORTHO05D009140 1.3e-176 623.2 441 76.0
Solyc09g018690.4 Solanum lycopersicum HOM05D000246 ORTHO05D009140 3.8e-176 621.7 436 76.1
Peaxi162Scf00293g00723 Petunia axillaris HOM05D000246 ORTHO05D009140 3.1e-162 575.5 455 69.0
Migut.D00789 Erythranthe guttata HOM05D000246 ORTHO05D009140 2.3e-117 426.4 389 57.3
Oeu020449.1 Olea europaea HOM05D000246 ORTHO05D009140 2.6e-116 422.9 421 53.0
CSS0047282 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D009140 4.4e-108 395.6 415 51.8
SGA_v2.0_scaffold158G37464 Striga asiatica HOM05D000246 ORTHO05D009140 1.9e-106 390.2 406 51.0
Prupe.6G037500 Prunus persica HOM05D000246 ORTHO05D009140 1.2e-105 387.5 440 49.5
Cc01_g15610 Coffea canephora HOM05D000246 ORTHO05D009140 1.0e-104 384.4 440 47.7
Lj1A109T41 Lonicera japonica HOM05D000246 ORTHO05D009140 1.3e-104 384.0 417 51.1
GSVIVG01024519001 Vitis vinifera HOM05D000246 ORTHO05D009140 3.0e-104 382.9 422 49.5
MD03G1046200 Malus domestica HOM05D000246 ORTHO05D009140 3.9e-104 382.5 439 49.2
CiPaw.13G059300 Carya illinoinensis HOM05D000246 ORTHO05D009140 6.6e-104 381.7 442 47.7
TWI74G1630 Tripterygium wilfordii HOM05D000246 ORTHO05D009140 4.3e-103 379.0 436 48.2
CANSAT54G0602 Cannabis sativa HOM05D000246 ORTHO05D009140 9.6e-103 377.9 399 51.4
FAN11G0500 Fragaria x ananassa HOM05D000246 ORTHO05D009140 4.8e-102 375.6 442 49.8
FAN16G3185 Fragaria x ananassa HOM05D000246 ORTHO05D009140 4.8e-102 375.6 442 49.8
TAR633G0607 Trochodendron aralioides HOM05D000246 ORTHO05D009140 4.8e-102 375.6 446 48.4
QL01p023430 Quercus lobata HOM05D000246 ORTHO05D009140 1.4e-101 374.0 447 49.0
Rhsim13G0056800 Rhododendron simsii HOM05D000246 ORTHO05D009140 1.4e-101 374.0 431 51.3
Manes.18G122300 Manihot esculenta HOM05D000246 ORTHO05D009140 3.1e-101 372.9 416 50.2
HanXRQChr01g0013541 Helianthus annuus HOM05D000246 ORTHO05D009140 4.0e-101 372.5 390 52.3
Atru.chr10.2369 Acer truncatum HOM05D000246 ORTHO05D009140 9.0e-101 371.3 442 47.1
TPR.G37358 Trifolium pratense HOM05D000246 ORTHO05D009140 9.9e-100 367.9 434 49.3
Potri.013G161200 Populus trichocarpa HOM05D000246 ORTHO05D009140 2.2e-99 366.7 440 46.4
RcHm_v2.0_Chr5g0074061 Rosa chinensis HOM05D000246 ORTHO05D009140 1.1e-98 364.4 442 48.2
Lj6g0007866 Lotus japonicus HOM05D000246 ORTHO05D009140 2.4e-98 363.2 442 48.9
Duzib168G1839 Durio zibethinus HOM05D000246 ORTHO05D009140 4.2e-98 362.5 430 46.5
arahy.Tifrunner.gnm1.ann1.32IKG8 Arachis hypogaea HOM05D000246 ORTHO05D009140 1.3e-96 357.5 408 49.3
MBI15_g11744_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D009140 1.3e-96 357.5 448 47.1
vmacro02858 Vaccinium macrocarpon HOM05D000246 ORTHO05D009140 2.3e-96 356.7 447 47.2
Haze_24501 Corylus avellana HOM05D000246 ORTHO05D009140 2.5e-95 353.2 432 47.9
MELO3C008833.2 Cucumis melo HOM05D000246 ORTHO05D009140 2.5e-95 353.2 411 48.2
EL10Ac4g08390 Beta vulgaris HOM05D000246 ORTHO05D009140 1.3e-94 350.9 416 47.4
Lalb_Chr15g0085521 Lupinus albus HOM05D000246 ORTHO05D009140 2.8e-94 349.7 424 48.8
Sed0012503 Sechium edule HOM05D000246 ORTHO05D009140 8.1e-94 348.2 423 46.8
Hund18366 Selenicereus undatus HOM05D000246 ORTHO05D009140 8.1e-94 348.2 416 48.3
CsaV3_4G012090 Cucumis sativus L. HOM05D000246 ORTHO05D009140 2.4e-93 346.7 413 47.9
Medtr3g063040 Medicago truncatula HOM05D000246 ORTHO05D009140 2.4e-93 346.7 435 46.0
MSTRG.18522 Avicennia marina HOM05D000246 ORTHO05D009140 2.6e-92 343.2 399 49.4
Glyma.18G048900 Glycine max HOM05D000246 ORTHO05D009140 3.4e-92 342.8 443 46.7
Phvul.006G082600 Phaseolus vulgaris HOM05D000246 ORTHO05D009140 1.7e-91 340.5 443 45.6
ECA248G0782 Erigeron canadensis HOM05D000246 ORTHO05D009140 2.9e-91 339.7 402 48.8
Ca_15092_v3 Cicer arietinum L. HOM05D000246 ORTHO05D009140 3.8e-91 339.3 436 45.2
AUR62037584 Chenopodium quinoa HOM05D000246 ORTHO05D009140 1.4e-90 337.4 402 48.8
Actinidia11642 Actinidia chinensis HOM05D000246 ORTHO05D009140 1.9e-90 337.0 266 63.5
arahy.Tifrunner.gnm1.ann1.KDY275 Arachis hypogaea HOM05D000246 ORTHO05D009140 4.6e-89 332.4 390 49.0
Aqoxy5G02490 Aquilegia oxysepala HOM05D000246 ORTHO05D009140 1.0e-88 331.3 435 46.0
DCAR_004785 Daucus carota HOM05D000246 ORTHO05D009140 8.7e-88 328.2 425 46.1
FvH4_3g41250 Fragaria vesca HOM05D000246 ORTHO05D009140 2.5e-87 326.6 402 48.8
Sc12g0000050 Simmondsia chinensis HOM05D000246 ORTHO05D009140 1.6e-86 323.9 439 42.8
Psat5g146240 Pisum sativum HOM05D000246 ORTHO05D009140 3.7e-86 322.8 421 44.9
PGSC0003DMG402025422 Solanum tuberosum HOM05D000246 ORTHO05D009140 3.1e-85 319.7 260 68.5
Ciclev10001421m.g Citrus clementina HOM05D000246 ORTHO05D009140 4.5e-84 315.8 391 47.8
Ah.04g164140 Amaranthus hybridus HOM05D000246 ORTHO05D009140 6.4e-83 312.0 424 44.1
Lsat_1_v5_gn_5_176881 Lactuca sativa HOM05D000246 ORTHO05D009140 2.1e-81 307.0 398 46.0
ATR1127G158 Amborella trichopoda HOM05D000246 ORTHO05D009140 3.5e-81 306.2 439 43.7
Sabra13G0128900 Salix brachista HOM05D000246 ORTHO05D009140 3.0e-80 303.1 412 43.7
Glyma.11G201900 Glycine max HOM05D000246 ORTHO05D009140 2.5e-79 300.1 269 59.5
VMungo0540G2472 Vigna mungo HOM05D000246 ORTHO05D009140 1.2e-76 291.2 269 56.9
MELO3C008825.2 Cucumis melo HOM05D000246 ORTHO05D009140 5.5e-74 282.3 285 51.6
SEGI_37344 Sequoiadendron giganteum HOM05D000246 ORTHO05D009140 5.7e-71 272.3 448 38.8
HPP92_014358 Vanilla planifolia HOM05D000246 ORTHO05D009140 2.9e-67 260.0 400 39.8
ClCG04G005480 Citrullus lanatus HOM05D000246 ORTHO05D009140 1.1e-66 258.1 439 39.2
Os07g0681600 Oryza sativa ssp. japonica HOM05D000246 ORTHO05D009140 1.9e-66 257.3 415 38.3
CsaV3_4G012100 Cucumis sativus L. HOM05D000246 ORTHO05D009140 1.2e-65 254.6 264 47.7
Zm00001eb330800 Zea mays HOM05D000246 ORTHO05D009140 9.1e-61 238.4 426 37.1
SMO367G0949 Selaginella moellendorffii HOM05D000246 ORTHO05D009140 7.7e-52 208.8 396 36.1
Pp3c12_1610 Physcomitrium patens HOM05D000246 ORTHO05D009140 1.7e-46 191.0 271 42.4
TPR.G37336 Trifolium pratense HOM05D000246 ORTHO05D009140 6.3e-46 189.1 314 39.2
AagrBONN_evm.TU.Sc2ySwM_228.2819 Anthoceros agrestis HOM05D000246 ORTHO05D009140 4.5e-44 183.0 433 31.4
Dinv17919 Davidia involucrata HOM05D000246 ORTHO05D009140 2.7e-41 173.7 125 69.6
Mapoly0130s0046 Marchantia polymorpha HOM05D000246 ORTHO05D009140 6.8e-40 169.1 264 39.8
MD11G1048500 Malus domestica HOM05D000246 ORTHO05D009140 1.0e-35 155.2 142 52.8
SGA_v2.0_scaffold158G37461 Striga asiatica HOM05D000246 ORTHO05D009140 5.2e-32 142.9 140 52.9
FvH4_4g07250 Fragaria vesca HOM05D002724 ORTHO05D002995 4.4e-31 139.8 124 62.1
FAN12G4280 Fragaria x ananassa HOM05D000289 ORTHO05D209272 4.9e-30 136.3 144 54.2
VMungo0540G0783 Vigna mungo HOM05D000246 ORTHO05D009140 8.3e-30 135.6 168 45.2
CBR_g39230 Chara braunii HOM05D000246 ORTHO05D009140 1.1e-21 108.6 173 35.3
MD11G1048600 Malus domestica HOM05D000246 ORTHO05D009140 3.6e-17 93.6 89 56.2
Atru.chr10.2371 Acer truncatum HOM05D000246 ORTHO05D009140 3.7e-14 83.6 83 45.8
Actinidia23144 Actinidia chinensis HOM05D000246 ORTHO05D009140 3.3e-10 70.5 83 49.4
CsaV3_4G012070 Cucumis sativus L. HOM05D000246 ORTHO05D172834 4.0e-08 63.5 75 45.3
Lsat_1_v5_gn_5_105701 Lactuca sativa HOM05D000246 ORTHO05D005396 8.3e-06 55.8 122 33.6


User provided reference genes

Program Settings