Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002312g0010 Nicotiana tabacum HOM05D005041 ORTHO05D006003 4.3e-185 651.4 375 100.0
Peaxi162Scf00828g00019 Petunia axillaris HOM05D005041 ORTHO05D006003 1.4e-180 636.3 375 83.7
Solyc05g006470.4 Solanum lycopersicum HOM05D005041 ORTHO05D006003 3.0e-178 628.6 376 82.4
Nitab4.5_0004310g0020 Nicotiana tabacum HOM05D005041 ORTHO05D006003 1.1e-177 626.7 414 77.5
Actinidia11183 Actinidia chinensis HOM05D005041 ORTHO05D006003 6.3e-152 541.2 379 69.7
Dinv26517 Davidia involucrata HOM05D005041 ORTHO05D006003 6.3e-152 541.2 378 69.8
CiPaw.04G135200 Carya illinoinensis HOM05D005041 ORTHO05D006003 4.1e-151 538.5 379 79.9
CSS0038733 Camellia sinensis var. sinensis HOM05D005041 ORTHO05D006003 5.3e-151 538.1 379 68.9
Eucgr.K01189 Eucalyptus grandis HOM05D005041 ORTHO05D006003 9.1e-151 537.3 379 68.1
Cc05_g09060 Coffea canephora HOM05D005041 ORTHO05D006003 1.6e-150 536.6 380 69.7
Ciclev10015615m.g Citrus clementina HOM05D005041 ORTHO05D006003 3.8e-149 531.9 377 67.4
Atru.chr6.3564 Acer truncatum HOM05D005041 ORTHO05D006003 5.0e-149 531.6 379 67.8
Manes.01G129200 Manihot esculenta HOM05D005041 ORTHO05D006003 1.5e-148 530.0 378 73.3
GSVIVG01020787001 Vitis vinifera HOM05D005041 ORTHO05D006003 1.5e-148 530.0 379 68.6
PGR142G0148 Punica granatum HOM05D005041 ORTHO05D006003 3.2e-148 528.9 376 67.8
Potri.014G141700 Populus trichocarpa HOM05D005041 ORTHO05D006003 4.2e-148 528.5 379 81.3
QL08p043305 Quercus lobata HOM05D005041 ORTHO05D006003 4.2e-148 528.5 378 81.7
Cfa022568 Carpinus fangiana HOM05D005041 ORTHO05D006003 5.5e-148 528.1 380 77.4
Thecc.01G157600 Theobroma cacao HOM05D005041 ORTHO05D006003 9.4e-148 527.3 379 68.1
Nn3g21016 Nelumbo nucifera HOM05D005041 ORTHO05D006003 2.7e-147 525.8 379 67.8
Hma1.2p1_0178F.1_g078240 Hydrangea macrophylla HOM05D005041 ORTHO05D006003 1.0e-146 523.9 378 68.0
COL.COLO4_33676 Corchorus olitorius HOM05D005041 ORTHO05D006003 3.0e-146 522.3 372 68.0
ECA234G0116 Erigeron canadensis HOM05D005041 ORTHO05D006003 4.0e-146 521.9 377 65.0
CANSAT11G1484 Cannabis sativa HOM05D005041 ORTHO05D006003 6.8e-146 521.2 380 80.3
Prupe.3G170000 Prunus persica HOM05D005041 ORTHO05D006003 6.8e-146 521.2 379 77.6
TAR626G0242 Trochodendron aralioides HOM05D005041 ORTHO05D006003 6.8e-146 521.2 379 74.4
MSTRG.15060 Avicennia marina HOM05D005041 ORTHO05D006003 1.2e-145 520.4 376 67.3
Haze_13460 Corylus avellana HOM05D005041 ORTHO05D006003 5.7e-145 518.1 388 75.8
HanXRQChr16g0518211 Helianthus annuus HOM05D005041 ORTHO05D006003 2.8e-144 515.8 378 65.6
MD17G1143300 Malus domestica HOM05D005041 ORTHO05D006003 2.8e-144 515.8 379 77.6
Migut.D00514 Erythranthe guttata HOM05D005041 ORTHO05D006003 4.8e-144 515.0 382 67.3
Glyma.18G103800 Glycine max HOM05D005041 ORTHO05D006003 6.3e-144 514.6 376 79.5
TWI63G0392 Tripterygium wilfordii HOM05D005041 ORTHO05D006003 6.3e-144 514.6 377 65.5
DCAR_013571 Daucus carota HOM05D005041 ORTHO05D006003 1.8e-143 513.1 379 65.2
Lj6g0019726 Lotus japonicus HOM05D005041 ORTHO05D006003 3.1e-143 512.3 376 79.3
Glyma.08G311700 Glycine max HOM05D005041 ORTHO05D006003 4.1e-143 511.9 376 79.5
Gorai.011G123100 Gossypium raimondii HOM05D005041 ORTHO05D006003 5.4e-143 511.5 379 66.2
Lsat_1_v5_gn_4_52360 Lactuca sativa HOM05D005041 ORTHO05D006003 5.4e-143 511.5 379 64.9
Ah.01g004760 Amaranthus hybridus HOM05D005041 ORTHO05D006003 9.1e-143 510.8 379 67.0
MELO3C031066.2 Cucumis melo HOM05D005041 ORTHO05D006003 1.2e-142 510.4 379 65.4
Gohir.D10G111500 Gossypium hirsutum HOM05D005041 ORTHO05D006003 2.7e-142 509.2 379 66.0
Ca_14633_v3 Cicer arietinum L. HOM05D005041 ORTHO05D006003 7.7e-142 507.7 376 78.7
Sed0005186 Sechium edule HOM05D005041 ORTHO05D006003 7.7e-142 507.7 379 65.2
Gohir.A10G154500 Gossypium hirsutum HOM05D005041 ORTHO05D006003 1.0e-141 507.3 379 65.4
Phvul.005G127400 Phaseolus vulgaris HOM05D005041 ORTHO05D006003 1.3e-141 506.9 376 78.5
VMungo1080G0034 Vigna mungo HOM05D005041 ORTHO05D006003 1.7e-141 506.5 376 78.5
Psat5g186840 Pisum sativum HOM05D005041 ORTHO05D006003 1.5e-140 503.4 376 78.7
CsaV3_6G037940 Cucumis sativus L. HOM05D005041 ORTHO05D006003 1.9e-140 503.1 381 64.8
MD09G1156800 Malus domestica HOM05D005041 ORTHO05D006003 2.5e-140 502.7 388 64.7
Lalb_Chr20g0114161 Lupinus albus HOM05D005041 ORTHO05D006003 4.2e-140 501.9 376 64.9
Medtr3g049070 Medicago truncatula HOM05D005041 ORTHO05D006003 4.2e-140 501.9 376 77.4
Carub.0004s1211 Capsella rubella HOM05D005041 ORTHO05D006003 5.5e-140 501.5 374 65.0
AT2G30910 Arabidopsis thaliana HOM05D005041 ORTHO05D006003 1.6e-139 500.0 374 65.0
RcHm_v2.0_Chr2g0150441 Rosa chinensis HOM05D005041 ORTHO05D006003 1.6e-139 500.0 379 75.5
Manes.02G087100 Manihot esculenta HOM05D005041 ORTHO05D006003 2.1e-139 499.6 379 64.1
AL4G25850 Arabidopsis lyrata HOM05D005041 ORTHO05D006003 2.8e-139 499.2 374 65.0
BcaB02g10347 Brassica carinata HOM05D005041 ORTHO05D006003 3.6e-139 498.8 375 63.7
AL283U10030 Arabidopsis lyrata HOM05D005041 ORTHO05D006003 4.7e-139 498.4 374 65.0
PSO541G3312 Papaver somniferum HOM05D005041 ORTHO05D006003 8.0e-139 497.7 375 63.7
THA.LOC104826236 Tarenaya hassleriana HOM05D005041 ORTHO05D006003 8.0e-139 497.7 369 74.0
EL10Ac9g21025 Beta vulgaris HOM05D005041 ORTHO05D006003 1.8e-138 496.5 383 64.0
BcaC02g11169 Brassica carinata HOM05D005041 ORTHO05D006003 3.0e-138 495.7 375 63.2
A05p14760 Brassica napus HOM05D005041 ORTHO05D006003 3.0e-138 495.7 375 63.2
C04p19760 Brassica napus HOM05D005041 ORTHO05D006003 3.0e-138 495.7 375 63.2
BolC4t23509H Brassica oleracea HOM05D005041 ORTHO05D006003 3.0e-138 495.7 375 63.2
FAN09G1464 Fragaria x ananassa HOM05D000054 ORTHO05D006003 3.0e-138 495.7 374 74.1
Sp4g13380 Schrenkiella parvula HOM05D005041 ORTHO05D006003 3.0e-138 495.7 375 62.9
SGA_v2.0_scaffold1G00710 Striga asiatica HOM05D005041 ORTHO05D006003 4.0e-138 495.4 375 64.5
A03p17270 Brassica napus HOM05D005041 ORTHO05D006003 1.2e-137 493.8 375 62.7
BcaB01g04071 Brassica carinata HOM05D005041 ORTHO05D006003 1.5e-137 493.4 375 62.4
PSO675G8631 Papaver somniferum HOM05D005041 ORTHO05D006003 2.0e-137 493.0 375 63.2
BraA03t11001Z Brassica rapa HOM05D005041 ORTHO05D006003 2.6e-137 492.7 375 62.4
arahy.Tifrunner.gnm1.ann1.5LHA9P Arachis hypogaea HOM05D005041 ORTHO05D006003 7.5e-137 491.1 378 76.7
arahy.Tifrunner.gnm1.ann1.RC242R Arachis hypogaea HOM05D005041 ORTHO05D006003 7.5e-137 491.1 378 76.7
C03p20380 Brassica napus HOM05D005041 ORTHO05D006003 9.8e-137 490.7 375 62.7
BolC3t14416H Brassica oleracea HOM05D005041 ORTHO05D006003 9.8e-137 490.7 375 62.7
Hund00824 Selenicereus undatus HOM05D005041 ORTHO05D006003 2.8e-136 489.2 377 71.9
Aqoxy1G01950 Aquilegia oxysepala HOM05D005041 ORTHO05D006003 4.9e-136 488.4 372 63.7
BraA05t20405Z Brassica rapa HOM05D005041 ORTHO05D006003 1.1e-135 487.3 377 62.3
Aa31LG5G6010 Aethionema arabicum HOM05D005041 ORTHO05D006003 5.4e-135 485.0 406 62.3
SGA_v2.0_scaffold8G04656 Striga asiatica HOM05D005041 ORTHO05D006003 9.2e-135 484.2 375 62.7
CDE10G0970 Ceratophyllum demersum HOM05D005041 ORTHO05D006003 5.0e-133 478.4 369 63.7
vmacro12428 Vaccinium macrocarpon HOM05D005041 ORTHO05D006003 5.0e-133 478.4 389 64.0
Os02g0817200 Oryza sativa ssp. japonica HOM05D005041 ORTHO05D006003 3.3e-132 475.7 374 61.8
Sc12g0003800 Simmondsia chinensis HOM05D005041 ORTHO05D006003 1.2e-131 473.8 379 75.2
MBI06_g08528_MAGBIO Magnolia biondii HOM05D005041 ORTHO05D006003 2.1e-131 473.0 379 62.5
AT2G31300 Arabidopsis thaliana HOM05D005041 ORTHO05D006003 4.7e-131 471.9 358 64.8
Zm00001eb258930 Zea mays HOM05D005041 ORTHO05D006003 1.0e-130 470.7 369 62.3
FAN14G1924 Fragaria x ananassa HOM05D000054 ORTHO05D006003 1.4e-130 470.3 356 67.4
Phvul.006G036500 Phaseolus vulgaris HOM05D005041 ORTHO05D006003 1.4e-130 470.3 376 74.7
ClCG09G022250 Citrullus lanatus HOM05D005041 ORTHO05D006003 4.4e-129 465.3 386 60.1
Lj2A374G38 Lonicera japonica HOM05D005041 ORTHO05D006003 1.4e-127 460.3 353 66.0
Sed0006581 Sechium edule HOM05D005041 ORTHO05D006003 7.0e-127 458.0 341 65.4
TPR.G13543 Trifolium pratense HOM05D005041 ORTHO05D006003 4.6e-126 455.3 394 58.9
Dinv06276 Davidia involucrata HOM05D005041 ORTHO05D006003 3.0e-125 452.6 267 80.9
unitig_37.g12857 Utricularia gibba HOM05D005041 ORTHO05D006003 3.0e-125 452.6 367 59.7
FAN02G2360 Fragaria x ananassa HOM05D000054 ORTHO05D006003 5.6e-124 448.4 383 61.9
Glyma.10G216300 Glycine max HOM05D005041 ORTHO05D006003 3.6e-123 445.7 339 64.6
CDE10G1309 Ceratophyllum demersum HOM05D005041 ORTHO05D006003 2.3e-122 443.0 369 60.7
A04p23600 Brassica napus HOM05D005041 ORTHO05D006003 4.0e-122 442.2 380 57.9
HPP92_025809 Vanilla planifolia HOM05D005041 ORTHO05D006003 3.4e-121 439.1 368 61.4
VMungo0540G2345 Vigna mungo HOM05D005041 ORTHO05D006003 9.2e-119 431.0 335 64.2
Duzib187G1062 Durio zibethinus HOM05D005041 ORTHO05D006003 2.1e-115 419.9 379 57.8
Thhalv10017625m.g Eutrema salsugineum HOM05D005041 ORTHO05D006003 2.1e-115 419.9 263 74.5
Lju124A34T49 Lonicera japonica HOM05D005041 ORTHO05D006003 1.8e-114 416.8 281 70.5
C04p60050 Brassica napus HOM05D005041 ORTHO05D006003 6.8e-114 414.8 361 58.2
BolC4t27508H Brassica oleracea HOM05D005041 ORTHO05D006003 6.4e-112 408.3 371 56.3
FvH4_6g37551 Fragaria vesca HOM05D005041 ORTHO05D006003 2.4e-111 406.4 281 80.8
BcaB06g28392 Brassica carinata HOM05D005041 ORTHO05D006003 2.1e-110 403.3 335 59.4
Sopen05g002420 Solanum pennellii HOM05D005041 ORTHO05D006003 1.0e-109 401.0 257 76.3
SMO364G0091 Selaginella moellendorffii HOM05D005041 ORTHO05D006003 1.1e-108 397.5 380 51.3
BraA04t17886Z Brassica rapa HOM05D005041 ORTHO05D006003 1.5e-108 397.1 368 55.7
Pp3c18_4810 Physcomitrium patens HOM05D005041 ORTHO05D006003 3.4e-105 386.0 381 56.4
Pp3c19_12930 Physcomitrium patens HOM05D005041 ORTHO05D006003 2.9e-104 382.9 371 55.8
AagrBONN_evm.TU.Sc2ySwM_228.2899 Anthoceros agrestis HOM05D005041 ORTHO05D006003 1.6e-102 377.1 362 51.7
Mapoly0090s0056 Marchantia polymorpha HOM05D005041 ORTHO05D006003 3.5e-102 375.9 389 51.7
Mapoly0116s0052 Marchantia polymorpha HOM05D005041 ORTHO05D006003 2.3e-101 373.2 389 48.8
Cpa.g.sc50.61 Carica papaya HOM05D005041 ORTHO05D006003 3.4e-97 359.4 253 67.6
ATR0787G051 Amborella trichopoda HOM05D005041 ORTHO05D006003 1.3e-88 330.9 190 79.5
Zm00001eb191400 Zea mays HOM05D005041 ORTHO05D006003 1.1e-87 327.8 253 61.7
AUR62024003 Chenopodium quinoa HOM05D005041 ORTHO05D006003 1.1e-82 311.2 309 62.8
Nn6g34435 Nelumbo nucifera HOM05D005041 ORTHO05D006003 2.5e-79 300.1 215 67.9
SalBow4G0308 Salvia bowleyana HOM05D005041 ORTHO05D006003 6.0e-78 295.4 209 70.3
AUR62031794 Chenopodium quinoa HOM05D005041 ORTHO05D006003 9.0e-74 281.6 245 59.6
Thhalv10017010m.g Eutrema salsugineum HOM05D005041 ORTHO05D006003 1.3e-67 261.2 374 40.6
Sabra14G0106900 Salix brachista HOM05D005041 ORTHO05D006003 1.1e-66 258.1 220 61.4
CBR_g18699 Chara braunii HOM05D005041 ORTHO05D006003 9.1e-58 228.4 538 29.4
Actinidia12824 Actinidia chinensis HOM05D005041 ORTHO05D006003 2.0e-57 227.3 153 73.9
Oeu032123.1 Olea europaea HOM05D005041 ORTHO05D006003 3.4e-57 226.5 146 73.3
CARHR124910 Cardamine hirsuta HOM05D005041 ORTHO05D006003 3.9e-53 213.0 110 87.3
CARHR124390 Cardamine hirsuta HOM05D005041 ORTHO05D006003 4.4e-52 209.5 110 86.4
Sopen05g002410 Solanum pennellii HOM05D005041 ORTHO05D006003 3.1e-50 203.4 271 45.4
SEGI_31471 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 3.0e-45 186.8 139 64.0
Cfa026893 Carpinus fangiana HOM05D005041 ORTHO05D006003 2.8e-43 180.3 363 31.4
Duzib147G0812 Durio zibethinus HOM05D005041 ORTHO05D006003 1.8e-26 124.4 146 47.9
SHI23137 Sapria himalayana HOM05D005041 ORTHO05D006003 3.6e-22 110.2 61 73.8
Cre16.g648100 Chlamydomonas reinhardtii HOM05D005041 ORTHO05D006003 8.0e-22 109.0 199 33.7
SEGI_23574 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 8.9e-21 105.5 66 69.7
Duzib147G0224 Durio zibethinus HOM05D005041 ORTHO05D006003 2.9e-19 100.5 59 76.3
TAR383G0169 Trochodendron aralioides HOM05D005041 ORTHO05D006003 5.9e-17 92.8 56 67.9
CARHR285180 Cardamine hirsuta HOM05D005041 ORTHO05D006003 2.3e-16 90.9 52 69.2
Lsat_1_v5_gn_9_20280 Lactuca sativa HOM05D005041 ORTHO05D002973 3.6e-14 83.6 78 51.3
Haze_27289 Corylus avellana HOM05D005041 ORTHO05D006003 2.3e-13 80.9 285 29.1
AUR62031783 Chenopodium quinoa HOM05D004756 ORTHO05D005793 7.5e-12 75.9 48 72.9
SEGI_36522 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 3.9e-08 63.5 42 64.3
Glyma.02G162651 Glycine max HOM05D005041 ORTHO05D006003 1.5e-07 61.6 37 70.3


User provided reference genes

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