Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001823g0090 Nicotiana tabacum HOM05D005846 ORTHO05D007369 2.8e-132 476.5 484 100.0
Nitab4.5_0003110g0060 Nicotiana tabacum HOM05D005846 ORTHO05D007369 1.6e-87 327.8 606 70.5
Peaxi162Scf00377g00722 Petunia axillaris HOM05D005846 ORTHO05D007369 9.9e-69 265.4 173 85.5
CAN.G899.26 Capsicum annuum HOM05D005846 ORTHO05D007369 4.2e-67 260.0 225 69.3
Solyc01g090670.3 Solanum lycopersicum HOM05D005846 ORTHO05D007369 1.2e-66 258.5 225 69.3
Sopen01g036400 Solanum pennellii HOM05D005846 ORTHO05D007369 6.0e-66 256.1 225 68.9
HanXRQChr06g0168821 Helianthus annuus HOM05D005846 ORTHO05D007369 1.4e-62 245.0 173 76.3
ECA236G0469 Erigeron canadensis HOM05D005846 ORTHO05D007369 2.4e-62 244.2 173 76.9
QL04p035021 Quercus lobata HOM05D005846 ORTHO05D007369 3.1e-62 243.8 169 77.5
SGA_v2.0_scaffold52G19202 Striga asiatica HOM05D005846 ORTHO05D007369 5.3e-62 243.0 170 78.2
TPR.G39153 Trifolium pratense HOM05D005846 ORTHO05D007369 1.5e-61 241.5 171 74.9
Haze_02742 Corylus avellana HOM05D005846 ORTHO05D007369 2.6e-61 240.7 169 76.9
Migut.B01566 Erythranthe guttata HOM05D005846 ORTHO05D007369 4.4e-61 240.0 171 76.0
Prupe.2G134200 Prunus persica HOM05D005846 ORTHO05D007369 9.9e-61 238.8 171 76.0
COL.COLO4_35176 Corchorus olitorius HOM05D005846 ORTHO05D007369 1.3e-60 238.4 171 76.6
Lj9C561G11 Lonicera japonica HOM05D005846 ORTHO05D007369 1.7e-60 238.0 173 74.6
CANSAT21G1379 Cannabis sativa HOM05D005846 ORTHO05D007369 2.2e-60 237.7 171 73.7
Manes.05G051500 Manihot esculenta HOM05D005846 ORTHO05D007369 2.2e-60 237.7 171 75.4
PGR004G1251 Punica granatum HOM05D005846 ORTHO05D007369 2.2e-60 237.7 171 76.0
Dinv44098 Davidia involucrata HOM05D005846 ORTHO05D007369 2.9e-60 237.3 171 77.2
Duzib116G0440 Durio zibethinus HOM05D005846 ORTHO05D007369 2.9e-60 237.3 170 76.5
MD07G1110700 Malus domestica HOM05D005846 ORTHO05D007369 2.9e-60 237.3 171 76.0
arahy.Tifrunner.gnm1.ann1.DPE9LE Arachis hypogaea HOM05D005846 ORTHO05D007369 4.9e-60 236.5 171 73.1
arahy.Tifrunner.gnm1.ann1.SA9NP4 Arachis hypogaea HOM05D005846 ORTHO05D007369 4.9e-60 236.5 171 73.1
Ciclev10019079m.g Citrus clementina HOM05D005846 ORTHO05D007369 6.4e-60 236.1 171 76.0
VMungo1383G2837 Vigna mungo HOM05D005846 ORTHO05D007369 8.4e-60 235.7 171 73.1
Eucgr.D02512 Eucalyptus grandis HOM05D005846 ORTHO05D007369 1.1e-59 235.3 171 74.3
CiPaw.06G031700 Carya illinoinensis HOM05D005846 ORTHO05D007369 1.4e-59 235.0 171 74.9
Medtr7g045280 Medicago truncatula HOM05D005846 ORTHO05D007369 1.4e-59 235.0 170 73.5
DCAR_031886 Daucus carota HOM05D005846 ORTHO05D007369 1.9e-59 234.6 171 74.3
Lsat_1_v5_gn_7_11161 Lactuca sativa HOM05D005846 ORTHO05D007369 2.4e-59 234.2 177 73.4
CSS0006984 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 4.2e-59 233.4 171 75.4
Lj1g0009878 Lotus japonicus HOM05D005846 ORTHO05D007369 4.2e-59 233.4 171 72.5
Thecc.01G387400 Theobroma cacao HOM05D005846 ORTHO05D007369 4.2e-59 233.4 171 75.4
vmacro13469 Vaccinium macrocarpon HOM05D005846 ORTHO05D007369 4.2e-59 233.4 170 75.9
Psat3g158120 Pisum sativum HOM05D005846 ORTHO05D007369 5.4e-59 233.0 171 73.1
Rhsim02G0216700 Rhododendron simsii HOM05D005846 ORTHO05D007369 5.4e-59 233.0 171 74.3
CSS0013945 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 7.1e-59 232.6 171 74.9
Cc02_g24740 Coffea canephora HOM05D005846 ORTHO05D007369 7.1e-59 232.6 223 61.4
Cfa011122 Carpinus fangiana HOM05D005846 ORTHO05D007369 1.2e-58 231.9 169 75.7
RcHm_v2.0_Chr1g0348261 Rosa chinensis HOM05D005846 ORTHO05D007369 1.6e-58 231.5 171 73.1
Sp4g27070 Schrenkiella parvula HOM05D005846 ORTHO05D007369 7.9e-58 229.2 171 73.1
Potri.014G057000 Populus trichocarpa HOM05D005846 ORTHO05D007369 1.0e-57 228.8 167 75.4
TWI14G0811 Tripterygium wilfordii HOM05D005846 ORTHO05D007369 1.3e-57 228.4 171 72.5
Atru.chr5.196 Acer truncatum HOM05D005846 ORTHO05D007369 3.0e-57 227.3 171 71.9
Phvul.007G143350 Phaseolus vulgaris HOM05D005846 ORTHO05D007369 3.0e-57 227.3 171 70.8
Hund27391 Selenicereus undatus HOM05D005846 ORTHO05D007369 3.0e-57 227.3 169 72.2
ClCG06G002930 Citrullus lanatus HOM05D005846 ORTHO05D007369 5.1e-57 226.5 172 72.7
Glyma.01G074700 Glycine max HOM05D005846 ORTHO05D007369 5.1e-57 226.5 171 71.9
GSVIVG01018216001 Vitis vinifera HOM05D005846 ORTHO05D007369 5.1e-57 226.5 171 71.3
Thhalv10001339m.g Eutrema salsugineum HOM05D005846 ORTHO05D007369 6.6e-57 226.1 171 72.5
AL4G44100 Arabidopsis lyrata HOM05D005846 ORTHO05D007369 8.7e-57 225.7 171 72.5
MBI05_g14240_MAGBIO Magnolia biondii HOM05D005846 ORTHO05D007369 8.7e-57 225.7 171 71.3
Aqoxy5G03824 Aquilegia oxysepala HOM05D005846 ORTHO05D007369 1.1e-56 225.3 171 71.9
MSTRG.28219 Avicennia marina HOM05D005846 ORTHO05D007369 1.1e-56 225.3 171 71.9
Carub.0004s2760 Capsella rubella HOM05D005846 ORTHO05D007369 1.1e-56 225.3 171 72.5
CsaV3_6G009050 Cucumis sativus L. HOM05D005846 ORTHO05D007369 1.1e-56 225.3 172 72.7
Gohir.D11G145600 Gossypium hirsutum HOM05D005846 ORTHO05D007369 1.1e-56 225.3 172 73.8
Actinidia22778 Actinidia chinensis HOM05D005846 ORTHO05D007369 1.5e-56 224.9 167 74.9
Actinidia22833 Actinidia chinensis HOM05D005846 ORTHO05D007369 1.5e-56 224.9 167 74.9
FAN03G1473 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.5e-56 224.9 171 69.6
FAN06G0321 Fragaria x ananassa HOM05D005846 ORTHO05D007369 1.5e-56 224.9 171 69.6
CARHR140260 Cardamine hirsuta HOM05D005846 ORTHO05D007369 1.9e-56 224.6 171 72.5
AT2G45000 Arabidopsis thaliana HOM05D005846 ORTHO05D007369 3.3e-56 223.8 171 72.5
FAN01G1706 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.6e-56 223.0 171 69.0
FAN10G4209 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.6e-56 223.0 171 69.0
Ah.05g173450 Amaranthus hybridus HOM05D005846 ORTHO05D007369 9.6e-56 222.2 169 71.6
FAN06G3163 Fragaria x ananassa HOM05D005846 ORTHO05D007369 9.6e-56 222.2 171 69.0
FAN10G1341 Fragaria x ananassa HOM05D005846 ORTHO05D007369 9.6e-56 222.2 171 69.0
Glyma.11G162365 Glycine max HOM05D005846 ORTHO05D007369 9.6e-56 222.2 171 70.8
Gohir.A11G139400 Gossypium hirsutum HOM05D005846 ORTHO05D007369 9.6e-56 222.2 172 72.7
A05p05100 Brassica napus HOM05D005846 ORTHO05D007369 2.1e-55 221.1 172 72.1
Sabra14G0041600 Salix brachista HOM05D002053 ORTHO05D002135 2.1e-55 221.1 164 74.4
EL10Ac1g00809 Beta vulgaris HOM05D005846 ORTHO05D007369 3.6e-55 220.3 169 72.2
Ca_26287_v3 Cicer arietinum L. HOM05D005846 ORTHO05D007369 4.8e-55 219.9 172 70.9
BcaC02g12270 Brassica carinata HOM05D005846 ORTHO05D007369 1.4e-54 218.4 172 71.5
Gorai.007G156100 Gossypium raimondii HOM05D005846 ORTHO05D007369 1.4e-54 218.4 179 70.9
BraA05t19484Z Brassica rapa HOM05D005846 ORTHO05D007369 2.4e-54 217.6 171 71.9
THA.LOC104802481 Tarenaya hassleriana HOM05D005846 ORTHO05D007369 3.1e-54 217.2 171 71.3
C04p05950 Brassica napus HOM05D005846 ORTHO05D007369 1.2e-53 215.3 172 70.9
BolC4t22226H Brassica oleracea HOM05D005846 ORTHO05D007369 1.2e-53 215.3 172 70.9
Aa31LG1G26590 Aethionema arabicum HOM05D005846 ORTHO05D007369 1.5e-53 214.9 171 69.0
PSO675G5996 Papaver somniferum HOM05D005846 ORTHO05D007369 1.5e-53 214.9 170 69.4
MELO3C022237.2 Cucumis melo HOM05D005846 ORTHO05D007369 2.6e-53 214.2 174 69.5
PSO541G5798 Papaver somniferum HOM05D005846 ORTHO05D007369 2.6e-53 214.2 170 69.4
Lalb_Chr19g0126671 Lupinus albus HOM05D005846 ORTHO05D007369 3.4e-53 213.8 173 68.8
Sed0022623 Sechium edule HOM05D005846 ORTHO05D007369 3.4e-53 213.8 173 69.9
unitig_26.g8879 Utricularia gibba HOM05D005846 ORTHO05D007369 1.1e-51 208.8 172 68.6
CDE02G2440 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 1.9e-51 208.0 170 67.1
CDE04G1707 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 4.6e-50 203.4 170 65.9
ATR0559G037 Amborella trichopoda HOM05D005846 ORTHO05D007369 7.9e-50 202.6 169 66.3
Nn6g33892 Nelumbo nucifera HOM05D005846 ORTHO05D007369 1.5e-48 198.4 123 84.6
Oeu061505.1 Olea europaea HOM05D005846 ORTHO05D007369 1.5e-48 198.4 133 78.2
arahy.Tifrunner.gnm1.ann1.2XVX2B Arachis hypogaea HOM05D005846 ORTHO05D007369 3.3e-48 197.2 183 62.3
HanXRQChr04g0123471 Helianthus annuus HOM05D005846 ORTHO05D007369 9.6e-48 195.7 124 80.6
TAR375G0515 Trochodendron aralioides HOM05D005846 ORTHO05D007369 2.8e-47 194.1 124 82.3
Zm00001eb367060 Zea mays HOM05D005846 ORTHO05D007369 6.2e-47 193.0 171 62.0
FvH4_7g10470 Fragaria vesca HOM05D005846 ORTHO05D007369 4.5e-45 186.8 124 77.4
Pp3c15_14630 Physcomitrium patens HOM05D005846 ORTHO05D007369 7.9e-42 176.0 168 57.1
AagrBONN_evm.TU.Sc2ySwM_117.1077 Anthoceros agrestis HOM05D005846 ORTHO05D007369 1.0e-41 175.6 161 59.0
AUR62004139 Chenopodium quinoa HOM05D005846 ORTHO05D007369 1.3e-41 175.3 187 58.8
AUR62013700 Chenopodium quinoa HOM05D005846 ORTHO05D007369 2.3e-41 174.5 135 71.9
HPP92_027757 Vanilla planifolia HOM05D005846 ORTHO05D007369 1.1e-40 172.2 152 61.2
HPP92_002750 Vanilla planifolia HOM05D005846 ORTHO05D007369 2.5e-40 171.0 166 56.0
Mapoly0005s0221 Marchantia polymorpha HOM05D005846 ORTHO05D007369 2.1e-39 167.9 158 58.2
CBR_g21126 Chara braunii HOM05D005846 ORTHO05D007369 3.3e-32 144.1 124 64.5
Sc02g0002920 Simmondsia chinensis HOM05D005846 ORTHO05D007369 9.7e-32 142.5 122 67.2
PGR004G1857 Punica granatum HOM05D005846 ORTHO05D007369 1.3e-31 142.1 100 77.0
Os01g0856600 Oryza sativa ssp. japonica HOM05D005846 ORTHO05D007369 2.6e-29 134.4 131 54.2
Atru.chr5.198 Acer truncatum HOM05D002424 ORTHO05D002640 2.2e-28 131.3 110 64.5
QL04p035108 Quercus lobata HOM05D005846 ORTHO05D007369 2.8e-23 114.4 94 68.1
Cpa.g.sc22.4 Carica papaya HOM05D005846 ORTHO05D007369 1.1e-22 112.5 62 90.3
QL04p035237 Quercus lobata HOM05D005846 ORTHO05D007369 3.8e-20 104.0 92 65.2
Lsat_1_v5_gn_4_126501 Lactuca sativa HOM05D005846 ORTHO05D007369 5.1e-17 93.6 63 76.2
HPP92_006013 Vanilla planifolia HOM05D005846 ORTHO05D007369 8.8e-17 92.8 107 45.8
Atru.chr5.201 Acer truncatum HOM05D005846 ORTHO05D007369 7.0e-14 83.2 79 57.0
PRCOL_00002612 Prasinoderma coloniale HOM05D005846 ORTHO05D007369 3.2e-11 74.3 149 36.9
Cre16.g677700 Chlamydomonas reinhardtii HOM05D005846 ORTHO05D007369 2.3e-09 68.2 124 37.1
HanXRQChr02g0053971 Helianthus annuus HOM05D005846 ORTHO05D000176 2.6e-08 64.7 32 96.9
HanXRQChr12g0366671 Helianthus annuus HOM05D005846 ORTHO05D007369 2.6e-08 64.7 35 88.6
arahy.Tifrunner.gnm1.ann1.V1AVP1 Arachis hypogaea HOM05D005846 ORTHO05D007369 1.3e-07 62.4 62 62.9
HanXRQChr16g0530801 Helianthus annuus HOM05D005846 ORTHO05D007369 1.3e-07 62.4 32 90.6
HanXRQChr01g0009681 Helianthus annuus HOM05D005846 ORTHO05D007369 9.1e-06 56.2 32 81.2


User provided reference genes

Program Settings