Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001668g0140 Nicotiana tabacum HOM05D002244 ORTHO05D002269 1.2e-95 354.0 308 100.0
Nitab4.5_0001668g0100 Nicotiana tabacum HOM05D002244 ORTHO05D002269 3.1e-56 223.0 169 75.1
TPR.G29269 Trifolium pratense HOM05D002244 ORTHO05D002269 6.3e-41 172.2 215 47.4
MD10G1337400 Malus domestica HOM05D002244 ORTHO05D002269 7.0e-40 168.7 213 47.4
FvH4_3g00440 Fragaria vesca HOM05D002244 ORTHO05D002269 1.7e-38 164.1 216 45.4
PGSC0003DMG400013362 Solanum tuberosum HOM05D002244 ORTHO05D002269 5.0e-38 162.5 172 57.6
Sopen11g007400 Solanum pennellii HOM05D002244 ORTHO05D002269 8.6e-38 161.8 172 57.0
Solyc11g012670.1 Solanum lycopersicum HOM05D002244 ORTHO05D002269 3.3e-37 159.8 172 57.0
Glyma.09G013300 Glycine max HOM05D002244 ORTHO05D002269 2.8e-33 146.7 226 40.7
Dinv15359 Davidia involucrata HOM05D002244 ORTHO05D002269 4.9e-33 146.0 173 52.0
Oeu047045.1 Olea europaea HOM05D002244 ORTHO05D002269 3.1e-32 143.3 161 55.3
CAN.G1156.10 Capsicum annuum HOM05D002244 ORTHO05D002269 5.4e-32 142.5 148 56.1
Lj6g0010986 Lotus japonicus HOM05D002244 ORTHO05D002269 5.4e-32 142.5 203 41.9
Peaxi162Scf00008g00025 Petunia axillaris HOM05D002244 ORTHO05D002269 3.5e-31 139.8 190 49.5
HanXRQChr17g0558121 Helianthus annuus HOM05D002244 ORTHO05D002269 1.7e-30 137.5 230 38.3
CSS0012721 Camellia sinensis var. sinensis HOM05D002244 ORTHO05D002269 2.3e-30 137.1 192 45.3
RcHm_v2.0_Chr5g0000631 Rosa chinensis HOM05D002244 ORTHO05D002269 6.6e-30 135.6 170 50.0
Sed0013425 Sechium edule HOM05D002244 ORTHO05D002269 8.6e-30 135.2 201 41.3
Prupe.4G005200 Prunus persica HOM05D002244 ORTHO05D002269 1.5e-29 134.4 179 45.8
VMungo0540G1149 Vigna mungo HOM05D002244 ORTHO05D002269 5.6e-29 132.5 201 39.8
GSVIVG01003493001 Vitis vinifera HOM05D002244 ORTHO05D002269 5.6e-29 132.5 175 45.7
Cc09_g00480 Coffea canephora HOM05D002244 ORTHO05D002269 7.3e-29 132.1 153 51.0
TAR626G0509 Trochodendron aralioides HOM05D002244 ORTHO05D002269 2.1e-28 130.6 171 47.4
QL05p068130 Quercus lobata HOM05D002244 ORTHO05D002269 3.6e-28 129.8 181 47.5
ClCG01G010980 Citrullus lanatus HOM05D002244 ORTHO05D002269 1.0e-27 128.3 178 47.2
THA.LOC104815477 Tarenaya hassleriana HOM05D002244 ORTHO05D002269 1.0e-27 128.3 145 49.0
Cpa.g.sc27.242 Carica papaya HOM05D002244 ORTHO05D002269 1.4e-27 127.9 171 48.5
Hma1.2p1_1963F.1_g309320 Hydrangea macrophylla HOM05D002244 ORTHO05D002269 1.4e-27 127.9 173 45.7
Glyma.09G013400 Glycine max HOM05D002244 ORTHO05D002269 1.8e-27 127.5 233 38.6
CiPaw.09G107900 Carya illinoinensis HOM05D002244 ORTHO05D002269 2.3e-27 127.1 167 46.1
Manes.08G070000 Manihot esculenta HOM05D002244 ORTHO05D002269 2.3e-27 127.1 170 44.7
FAN21G3814 Fragaria x ananassa HOM05D002244 ORTHO05D002269 3.1e-27 126.7 168 48.2
Lj4g0014160 Lotus japonicus HOM05D002244 ORTHO05D002269 3.1e-27 126.7 168 44.0
Sabra16G0011600 Salix brachista HOM05D002244 ORTHO05D002269 3.1e-27 126.7 170 44.7
Haze_07007 Corylus avellana HOM05D002244 ORTHO05D002269 4.0e-27 126.3 180 45.6
Eucgr.E03880 Eucalyptus grandis HOM05D002244 ORTHO05D002269 4.0e-27 126.3 178 46.6
Lj1P1246T17 Lonicera japonica HOM05D002244 ORTHO05D002269 6.8e-27 125.6 193 41.5
Potri.016G006800 Populus trichocarpa HOM05D002244 ORTHO05D002269 8.9e-27 125.2 170 43.5
Cfa000046 Carpinus fangiana HOM05D002244 ORTHO05D002269 1.2e-26 124.8 172 45.3
Glyma.07G267500 Glycine max HOM05D002244 ORTHO05D002269 1.5e-26 124.4 170 45.9
Glyma.15G118200 Glycine max HOM05D002244 ORTHO05D002269 1.5e-26 124.4 229 37.6
Rhsim13G0142000 Rhododendron simsii HOM05D002244 ORTHO05D002269 2.6e-26 123.6 158 44.9
FvH4_3g00470 Fragaria vesca HOM05D002244 ORTHO05D002269 4.4e-26 122.9 168 46.4
HPP92_007731 Vanilla planifolia HOM05D002244 ORTHO05D002269 5.8e-26 122.5 217 35.5
Ciclev10014469m.g Citrus clementina HOM05D002244 ORTHO05D002269 7.5e-26 122.1 168 44.6
FAN25G1760 Fragaria x ananassa HOM05D002244 ORTHO05D002269 7.5e-26 122.1 168 46.4
PSO302G0128 Papaver somniferum HOM05D002244 ORTHO05D002269 9.8e-26 121.7 171 42.7
Glyma.17G006500 Glycine max HOM05D002244 ORTHO05D002269 2.9e-25 120.2 191 40.3
HanXRQChr16g0516391 Helianthus annuus HOM05D002244 ORTHO05D002269 2.9e-25 120.2 176 43.8
Glyma.15G118100 Glycine max HOM05D002244 ORTHO05D002269 3.7e-25 119.8 217 35.9
Gohir.D06G217100 Gossypium hirsutum HOM05D002244 ORTHO05D002269 4.9e-25 119.4 202 41.6
Potri.006G019000 Populus trichocarpa HOM05D002244 ORTHO05D002269 4.9e-25 119.4 170 41.8
CsaV3_1G015490 Cucumis sativus L. HOM05D002244 ORTHO05D002269 6.4e-25 119.0 178 43.3
Medtr4g133740 Medicago truncatula HOM05D002244 ORTHO05D002269 6.4e-25 119.0 178 43.3
Gorai.010G249100 Gossypium raimondii HOM05D002244 ORTHO05D002269 8.3e-25 118.6 199 41.2
MD05G1360400 Malus domestica HOM05D002244 ORTHO05D002269 8.3e-25 118.6 179 42.5
Ah.09g233970 Amaranthus hybridus HOM05D002244 ORTHO05D002269 1.1e-24 118.2 132 46.2
EL10Ac8g20253 Beta vulgaris HOM05D002244 ORTHO05D002269 1.4e-24 117.9 138 47.8
Phvul.003G086100 Phaseolus vulgaris HOM05D002244 ORTHO05D002269 1.9e-24 117.5 169 44.4
Thecc.06G238800 Theobroma cacao HOM05D002244 ORTHO05D002269 1.9e-24 117.5 175 46.9
Sc05g0009800 Simmondsia chinensis HOM05D002244 ORTHO05D002269 2.4e-24 117.1 173 42.2
Lalb_Chr13g0304341 Lupinus albus HOM05D002244 ORTHO05D002269 3.2e-24 116.7 194 39.7
Ca_21003_v3 Cicer arietinum L. HOM05D002244 ORTHO05D002269 5.4e-24 115.9 165 43.6
SGA_v2.0_scaffold49G18233 Striga asiatica HOM05D002244 ORTHO05D002269 5.4e-24 115.9 203 33.5
Thecc.06G239300 Theobroma cacao HOM05D002244 ORTHO05D002269 9.2e-24 115.2 178 45.5
BcaNung00201 Brassica carinata HOM05D002244 ORTHO05D002269 1.2e-23 114.8 193 39.9
CANSAT56G2213 Cannabis sativa HOM05D002244 ORTHO05D002269 1.2e-23 114.8 176 43.2
Sabra06G0013300 Salix brachista HOM05D002244 ORTHO05D002269 1.6e-23 114.4 170 41.2
Gohir.A06G204400 Gossypium hirsutum HOM05D002244 ORTHO05D002269 2.0e-23 114.0 199 41.7
PSO210G3509 Papaver somniferum HOM05D002244 ORTHO05D002269 2.0e-23 114.0 169 40.8
Sed0011173 Sechium edule HOM05D002244 ORTHO05D002269 2.0e-23 114.0 167 43.1
DCAR_028407 Daucus carota HOM05D002244 ORTHO05D002269 2.7e-23 113.6 165 44.8
Duzib235G0088 Durio zibethinus HOM05D002244 ORTHO05D002269 3.5e-23 113.2 180 43.9
Atru.chr1.2294 Acer truncatum HOM05D002244 ORTHO05D002269 6.0e-23 112.5 168 42.3
A01p21210 Brassica napus HOM05D002244 ORTHO05D002269 6.0e-23 112.5 172 41.9
BraA01t02031Z Brassica rapa HOM05D002244 ORTHO05D002269 6.0e-23 112.5 172 41.9
AL7G38630 Arabidopsis lyrata HOM05D002244 ORTHO05D002269 7.8e-23 112.1 179 40.8
VMungo1215G0876 Vigna mungo HOM05D002244 ORTHO05D002269 7.8e-23 112.1 171 44.4
Aa31LG2G12450 Aethionema arabicum HOM05D002244 ORTHO05D002269 1.0e-22 111.7 191 39.8
TWI63G1199 Tripterygium wilfordii HOM05D002244 ORTHO05D002269 1.0e-22 111.7 171 40.9
Migut.H01625 Erythranthe guttata HOM05D002244 ORTHO05D002269 1.3e-22 111.3 162 45.1
AT4G16390 Arabidopsis thaliana HOM05D002244 ORTHO05D002269 2.3e-22 110.5 180 41.1
AUR62012838 Chenopodium quinoa HOM05D002244 ORTHO05D002269 3.0e-22 110.2 167 40.1
Carub.0007s2514 Capsella rubella HOM05D002244 ORTHO05D002269 5.0e-22 109.4 194 38.1
SalBow1G4884 Salvia bowleyana HOM05D002244 ORTHO05D002269 6.6e-22 109.0 164 44.5
Thhalv10024562m.g Eutrema salsugineum HOM05D002244 ORTHO05D002269 1.1e-21 108.2 172 40.7
Phvul.006G140100 Phaseolus vulgaris HOM05D002244 ORTHO05D002269 1.1e-21 108.2 216 35.6
CARHR222760 Cardamine hirsuta HOM05D002244 ORTHO05D002269 1.9e-21 107.5 191 38.2
BcaC09g50337 Brassica carinata HOM05D002244 ORTHO05D002269 2.5e-21 107.1 178 40.4
BolC1t02595H Brassica oleracea HOM05D002244 ORTHO05D002269 2.5e-21 107.1 178 40.4
PSO541G5028 Papaver somniferum HOM05D002244 ORTHO05D002269 2.5e-21 107.1 159 40.3
AUR62021821 Chenopodium quinoa HOM05D002244 ORTHO05D002269 5.6e-21 105.9 167 38.9
MBI16_g07771_MAGBIO Magnolia biondii HOM05D002244 ORTHO05D002269 5.6e-21 105.9 140 45.0
PGR042G1705 Punica granatum HOM05D002244 ORTHO05D002269 9.5e-21 105.1 175 42.9
Aqoxy1G04248 Aquilegia oxysepala HOM05D002244 ORTHO05D002269 1.2e-20 104.8 169 37.3
Sp7g14910 Schrenkiella parvula HOM05D002244 ORTHO05D002269 1.2e-20 104.8 178 39.3
TPR.G36060 Trifolium pratense HOM05D002244 ORTHO05D002269 1.2e-20 104.8 154 39.6
C01p26510 Brassica napus HOM05D002244 ORTHO05D002269 2.1e-20 104.0 178 39.3
CDE05G1508 Ceratophyllum demersum HOM05D002244 ORTHO05D002269 6.2e-20 102.4 71 64.8
BolC8t48364H Brassica oleracea HOM05D002244 ORTHO05D002269 1.8e-19 100.9 182 40.7
Duzib192G0948 Durio zibethinus HOM05D002244 ORTHO05D002269 3.1e-19 100.1 172 40.7
Glyma.09G013500 Glycine max HOM05D002244 ORTHO05D002269 3.1e-19 100.1 171 39.8
TPR.G10585 Trifolium pratense HOM05D002244 ORTHO05D002269 3.1e-19 100.1 213 33.3
Migut.J00730 Erythranthe guttata HOM05D002244 ORTHO05D002269 5.2e-19 99.4 201 36.8
A08p12230 Brassica napus HOM05D002244 ORTHO05D002269 6.8e-19 99.0 174 39.7
arahy.Tifrunner.gnm1.ann1.CTR9JW Arachis hypogaea HOM05D002244 ORTHO05D002269 8.9e-19 98.6 165 37.0
TPR.G30217 Trifolium pratense HOM05D002244 ORTHO05D002269 8.9e-19 98.6 229 30.6
Psat4g002160 Pisum sativum HOM05D002244 ORTHO05D002269 1.2e-18 98.2 166 37.3
BraA08t33235Z Brassica rapa HOM05D002244 ORTHO05D002269 2.6e-18 97.1 174 39.1
BcaC07g37983 Brassica carinata HOM05D002244 ORTHO05D002269 3.4e-18 96.7 174 40.8
arahy.Tifrunner.gnm1.ann1.BFSH12 Arachis hypogaea HOM05D002244 ORTHO05D002269 4.4e-18 96.3 165 36.4
FAN25G0761 Fragaria x ananassa HOM05D002244 ORTHO05D002269 2.2e-17 94.0 137 44.5
arahy.Tifrunner.gnm1.ann1.CEH98S Arachis hypogaea HOM05D002244 ORTHO05D002269 2.9e-17 93.6 192 33.3
arahy.Tifrunner.gnm1.ann1.DKXM8B Arachis hypogaea HOM05D002244 ORTHO05D002269 2.9e-17 93.6 192 33.3
VMungo0540G1537 Vigna mungo HOM05D002244 ORTHO05D002269 2.9e-17 93.6 196 36.7
Glyma.15G118300 Glycine max HOM05D002244 ORTHO05D002269 8.3e-17 92.0 153 41.2
Migut.G00781 Erythranthe guttata HOM05D002244 ORTHO05D002269 1.4e-16 91.3 138 40.6
ATR0827G159 Amborella trichopoda HOM05D002244 ORTHO05D002269 3.2e-16 90.1 215 31.6
Psat1g174480 Pisum sativum HOM05D002244 ORTHO05D002269 5.4e-16 89.4 200 31.0
HanXRQChr11g0344631 Helianthus annuus HOM05D003056 ORTHO05D027707 1.6e-15 87.8 56 69.6
SGA_v2.0_scaffold89G27531 Striga asiatica HOM05D002244 ORTHO05D002269 2.3e-14 84.0 190 31.1
COL.COLO4_31927 Corchorus olitorius HOM05D002244 ORTHO05D002269 5.1e-14 82.8 168 41.1
Glyma.09G013600 Glycine max HOM05D002244 ORTHO05D002269 3.3e-13 80.1 140 37.9
Psat1g174440 Pisum sativum HOM05D002244 ORTHO05D002269 1.2e-12 78.2 66 48.5
VMungo0540G1298 Vigna mungo HOM05D002244 ORTHO05D002269 2.8e-12 77.0 173 35.3
Lj6g0009459 Lotus japonicus HOM05D002244 ORTHO05D002269 3.6e-12 76.6 164 32.9
Lalb_Chr15g0088161 Lupinus albus HOM05D002244 ORTHO05D002269 6.2e-12 75.9 174 34.5
Medtr2g026635 Medicago truncatula HOM05D002244 ORTHO05D002269 6.2e-12 75.9 149 36.9
Lalb_Chr15g0088171 Lupinus albus HOM05D002244 ORTHO05D002269 1.8e-11 74.3 168 34.5
Phvul.006G140000 Phaseolus vulgaris HOM05D002244 ORTHO05D002269 4.0e-11 73.2 193 30.1
Actinidia02289 Actinidia chinensis HOM05D002244 ORTHO05D002269 5.2e-11 72.8 100 42.0
TPR.G10591 Trifolium pratense HOM05D002244 ORTHO05D002269 2.6e-10 70.5 167 29.9
Potri.006G018600 Populus trichocarpa HOM05D002244 ORTHO05D002269 7.5e-10 68.9 157 33.1
Medtr2g026645 Medicago truncatula HOM05D002244 ORTHO05D002269 1.3e-09 68.2 180 30.6
Migut.I00316 Erythranthe guttata HOM05D002244 ORTHO05D002269 3.7e-09 66.6 143 35.7
Medtr2g026600 Medicago truncatula HOM05D002244 ORTHO05D002269 6.4e-09 65.9 150 32.0
Psat1g174360 Pisum sativum HOM05D002244 ORTHO05D002269 6.4e-09 65.9 155 31.6
TPR.G22149 Trifolium pratense HOM05D002244 ORTHO05D002269 3.2e-08 63.5 95 37.9
Zm00001eb421320 Zea mays HOM05D001155 ORTHO05D027707 3.2e-08 63.5 168 29.2
Ca_00755_v3 Cicer arietinum L. HOM05D002244 ORTHO05D002269 1.2e-07 61.6 43 60.5
Ca_00756_v3 Cicer arietinum L. HOM05D002244 ORTHO05D002269 4.6e-07 59.7 44 52.3
SEGI_39585 Sequoiadendron giganteum HOM05D002244 ORTHO05D002269 6.0e-07 59.3 47 48.9
Zm00001eb008730 Zea mays HOM05D002244 ORTHO05D002269 6.0e-07 59.3 190 31.6


User provided reference genes

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