Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001534g0080 Nicotiana tabacum HOM05D015050 ORTHO05D017083 3.2e-99 365.2 196 100.0
Nitab4.5_0000687g0230 Nicotiana tabacum HOM05D015050 ORTHO05D017083 1.8e-41 173.3 191 57.1
Nitab4.5_0000041g0160 Nicotiana tabacum HOM05D015050 ORTHO05D017083 9.3e-38 161.0 193 52.3
Nitab4.5_0003336g0070 Nicotiana tabacum HOM05D015050 ORTHO05D017083 2.1e-26 123.2 67 86.6
Nitab4.5_0003465g0010 Nicotiana tabacum HOM05D015050 ORTHO05D017083 1.0e-20 104.4 59 86.4
Nitab4.5_0001754g0040 Nicotiana tabacum HOM05D015050 ORTHO05D017083 1.3e-20 104.0 195 49.2
Nitab4.5_0008505g0030 Nicotiana tabacum HOM05D015050 ORTHO05D017083 9.7e-19 97.8 149 45.0
Nitab4.5_0003436g0050 Nicotiana tabacum HOM05D015050 ORTHO05D017083 1.7e-15 87.0 44 93.2
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 8.8e-12 74.7 53 73.6
Nitab4.5_0003436g0070 Nicotiana tabacum HOM05D000036 ORTHO05D049400 8.8e-12 74.7 49 77.6
Nitab4.5_0001751g0120 Nicotiana tabacum HOM05D015050 ORTHO05D017083 2.8e-10 69.7 37 89.2
Oeu007271.1 Olea europaea HOM05D000004 ORTHO05D000034 3.1e-09 66.2 64 50.0
Peaxi162Scf00060g02118 Petunia axillaris HOM05D036228 ORTHO05D037300 3.1e-09 66.2 79 44.3
Oeu016951.1 Olea europaea HOM05D000004 ORTHO05D000034 5.3e-09 65.5 64 50.0
Nitab4.5_0007486g0030 Nicotiana tabacum HOM05D000004 ORTHO05D000002 2.0e-08 63.5 58 50.0
Oeu042996.1 Olea europaea HOM05D000004 ORTHO05D000034 2.0e-08 63.5 64 48.4
Nitab4.5_0000777g0200 Nicotiana tabacum HOM05D000004 ORTHO05D000002 2.6e-08 63.2 65 47.7
Nitab4.5_0002324g0020 Nicotiana tabacum HOM05D000004 ORTHO05D000002 2.6e-08 63.2 57 49.1
Oeu036360.1 Olea europaea HOM05D000004 ORTHO05D000224 2.6e-08 63.2 66 48.5
Oeu003508.1 Olea europaea HOM05D000004 ORTHO05D000034 5.9e-08 62.0 62 51.6
Nitab4.5_0002918g0010 Nicotiana tabacum HOM05D000004 ORTHO05D000002 7.7e-08 61.6 65 41.5
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-07 61.2 58 50.0
Nitab4.5_0001594g0030 Nicotiana tabacum HOM05D000004 ORTHO05D000002 1.0e-07 61.2 65 43.1
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 1.3e-07 60.8 58 50.0
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-07 60.8 58 50.0
Nitab4.5_0000015g0040 Nicotiana tabacum HOM05D011126 ORTHO05D013899 1.3e-07 60.8 60 50.0
Nitab4.5_0007082g0040 Nicotiana tabacum HOM05D000004 ORTHO05D000002 1.7e-07 60.5 65 41.5
Oeu002581.1 Olea europaea HOM05D000004 ORTHO05D000034 1.7e-07 60.5 64 46.9
Sopen04g016580 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 60.5 200 29.5
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 2.2e-07 60.1 58 48.3
Oeu018888.1 Olea europaea HOM05D009054 ORTHO05D000034 2.2e-07 60.1 64 46.9
Rhsim10G0110100 Rhododendron simsii HOM05D011308 ORTHO05D000034 2.2e-07 60.1 79 43.0
Nitab4.5_0000775g0050 Nicotiana tabacum HOM05D002918 ORTHO05D003326 2.9e-07 59.7 68 42.6
Rhsim05G0059200 Rhododendron simsii HOM05D011494 ORTHO05D000034 2.9e-07 59.7 66 42.4
RcHm_v2.0_Chr2g0130801 Rosa chinensis HOM05D000004 ORTHO05D000034 2.9e-07 59.7 58 41.4
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.8e-07 59.3 58 48.3
CANSAT78G1447 Cannabis sativa HOM05D008371 ORTHO05D000034 3.8e-07 59.3 65 43.1
Nitab4.5_0001061g0010 Nicotiana tabacum HOM05D002918 ORTHO05D003326 3.8e-07 59.3 68 44.1
Nitab4.5_0002388g0120 Nicotiana tabacum HOM05D000004 ORTHO05D000002 3.8e-07 59.3 66 42.4
Oeu039954.1 Olea europaea HOM05D009054 ORTHO05D000034 3.8e-07 59.3 63 44.4
Sopen01g015430 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen01g030720 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen01g036870 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen02g012310 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen03g035150 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen03g035450 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen04g029520 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen04g030350 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen05g004960 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen05g016260 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen06g003720 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen06g008240 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen08g027770 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen09g014030 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen10g033710 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen11g015150 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Sopen11g021510 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 58.9 66 42.4
Nitab4.5_0000099g0120 Nicotiana tabacum HOM05D000004 ORTHO05D000002 6.5e-07 58.5 65 44.6
Nitab4.5_0001061g0050 Nicotiana tabacum HOM05D002918 ORTHO05D003326 6.5e-07 58.5 68 44.1
Nitab4.5_0007915g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 6.5e-07 58.5 68 42.6
Sopen08g020670 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-07 58.5 59 47.5
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.5e-07 58.2 58 44.8
FvH4_3g19661 Fragaria vesca HOM05D000004 ORTHO05D000224 8.5e-07 58.2 68 39.7
Rhsim03G0014100 Rhododendron simsii HOM05D011494 ORTHO05D000034 8.5e-07 58.2 107 32.7
Sopen00g001180 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-07 58.2 66 40.9
THA.LOC104800026 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 8.5e-07 58.2 63 39.7
FvH4_2g11454 Fragaria vesca HOM05D000004 ORTHO05D000034 1.1e-06 57.8 68 39.7
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.1e-06 57.8 64 45.3
Rhsim06G0088500 Rhododendron simsii HOM05D020422 ORTHO05D000224 1.1e-06 57.8 63 46.0
Sopen07g018410 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 57.8 59 44.1
THA.LOC104810578 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.1e-06 57.8 63 39.7
CSS0042777 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.4e-06 57.4 59 44.1
FvH4_4g16178 Fragaria vesca HOM05D000004 ORTHO05D000224 1.4e-06 57.4 68 39.7
Rhsim08G0139100 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.4e-06 57.4 64 43.8
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.4e-06 57.4 64 43.8
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.9e-06 57.0 61 42.6
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-06 57.0 58 46.6
CANSAT11G1355 Cannabis sativa HOM05D000004 ORTHO05D000034 1.9e-06 57.0 52 44.2
Nitab4.5_0006596g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.9e-06 57.0 68 42.6
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.9e-06 57.0 64 46.9
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 1.9e-06 57.0 64 43.8
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.9e-06 57.0 64 43.8
THA.LOC104799777 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 1.9e-06 57.0 61 41.0
THA.LOC104822757 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 1.9e-06 57.0 50 48.0
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-06 56.6 58 46.6
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-06 56.6 58 44.8
CANSAT80G1570 Cannabis sativa HOM05D000004 ORTHO05D000034 2.5e-06 56.6 65 38.5
Nitab4.5_0001216g0130 Nicotiana tabacum HOM05D000004 ORTHO05D000002 2.5e-06 56.6 58 44.8
Nitab4.5_0001798g0040 Nicotiana tabacum HOM05D018883 ORTHO05D020897 2.5e-06 56.6 53 47.2
Oeu017575.1 Olea europaea HOM05D000004 ORTHO05D000034 2.5e-06 56.6 61 41.0
Rhsim02G0006400 Rhododendron simsii HOM05D020422 ORTHO05D000224 2.5e-06 56.6 63 46.0
RcHm_v2.0_Chr2g0145931 Rosa chinensis HOM05D000004 ORTHO05D000002 2.5e-06 56.6 66 33.3
Sopen05g010870 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-06 56.6 59 45.8
Sopen11g019630 Solanum pennellii HOM05D000004 ORTHO05D000034 2.5e-06 56.6 105 27.6
Nitab4.5_0000294g0210 Nicotiana tabacum HOM05D010781 ORTHO05D000034 3.2e-06 56.2 65 47.7
Nitab4.5_0003467g0010 Nicotiana tabacum HOM05D002918 ORTHO05D003326 3.2e-06 56.2 68 42.6
Sopen00g005310 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-06 56.2 59 44.1
Sopen09g013730 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-06 56.2 59 44.1
CSS0039137 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 4.2e-06 55.8 58 44.8
Manes.14G148397 Manihot esculenta HOM05D000004 ORTHO05D000034 4.2e-06 55.8 66 37.9
Manes.14G148419 Manihot esculenta HOM05D000004 ORTHO05D000034 4.2e-06 55.8 66 37.9
Oeu055555.1 Olea europaea HOM05D000004 ORTHO05D000224 4.2e-06 55.8 66 43.9
Sopen06g005350 Solanum pennellii HOM05D000004 ORTHO05D000034 4.2e-06 55.8 82 30.5
Sopen10g010080 Solanum pennellii HOM05D000004 ORTHO05D000034 4.2e-06 55.8 59 39.0
THA.LOC104800231 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 4.2e-06 55.8 50 48.0
vmacro12874 Vaccinium macrocarpon HOM05D002341 ORTHO05D015231 4.2e-06 55.8 58 43.1
CSS0014469 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 5.5e-06 55.5 61 42.6
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.5e-06 55.5 58 43.1
Manes.06G180001 Manihot esculenta HOM05D000004 ORTHO05D000034 5.5e-06 55.5 63 42.9
Manes.16G075950 Manihot esculenta HOM05D000004 ORTHO05D000034 5.5e-06 55.5 66 36.4
Oeu016216.1 Olea europaea HOM05D009054 ORTHO05D000034 5.5e-06 55.5 63 41.3
Oeu027445.1 Olea europaea HOM05D000004 ORTHO05D000034 5.5e-06 55.5 66 42.4
THA.LOC104804486 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 5.5e-06 55.5 50 46.0
THA.LOC104804682 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 5.5e-06 55.5 50 46.0
THA.LOC104807088 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 5.5e-06 55.5 50 46.0
THA.LOC104815156 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 5.5e-06 55.5 50 46.0
THA.LOC104825728 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 5.5e-06 55.5 50 46.0
THA.LOC109116733 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 5.5e-06 55.5 50 46.0
TWI77G0492 Tripterygium wilfordii HOM05D000004 ORTHO05D000034 5.5e-06 55.5 60 46.7
vmacro21906 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 5.5e-06 55.5 63 38.1
Ah.15g097950 Amaranthus hybridus HOM05D000004 ORTHO05D000002 7.2e-06 55.1 61 41.0
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.2e-06 55.1 58 46.6
Manes.18G139308 Manihot esculenta HOM05D000004 ORTHO05D000034 7.2e-06 55.1 66 36.4
Manes.18G140597 Manihot esculenta HOM05D000004 ORTHO05D000034 7.2e-06 55.1 66 36.4
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 7.2e-06 55.1 64 45.3
Rhsim10G0127900 Rhododendron simsii HOM05D011308 ORTHO05D000034 7.2e-06 55.1 64 45.3
Sopen00g005050 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen01g007880 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen01g010320 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen01g014780 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen01g015480 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen01g016910 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen03g011170 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen03g026970 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen05g005240 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen06g023420 Solanum pennellii HOM05D000004 ORTHO05D010959 7.2e-06 55.1 59 44.1
Sopen07g004860 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen08g017520 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen09g016790 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen10g012590 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen10g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
Sopen12g029420 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 55.1 59 44.1
THA.LOC104810638 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.2e-06 55.1 63 36.5
THA.LOC104815204 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 7.2e-06 55.1 64 37.5
THA.LOC104822870 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.2e-06 55.1 63 36.5
CANSAT35G0301 Cannabis sativa HOM05D008371 ORTHO05D000034 9.4e-06 54.7 89 33.7
Manes.07G076922 Manihot esculenta HOM05D000004 ORTHO05D000034 9.4e-06 54.7 66 36.4
Manes.08G134411 Manihot esculenta HOM05D000004 ORTHO05D000034 9.4e-06 54.7 66 36.4
Manes.15G183710 Manihot esculenta HOM05D000004 ORTHO05D000034 9.4e-06 54.7 66 36.4
Manes.16G051801 Manihot esculenta HOM05D000004 ORTHO05D000034 9.4e-06 54.7 66 36.4
Manes.18G144913 Manihot esculenta HOM05D000004 ORTHO05D000034 9.4e-06 54.7 66 36.4
Nitab4.5_0000366g0020 Nicotiana tabacum HOM05D002918 ORTHO05D003326 9.4e-06 54.7 61 42.6
Nitab4.5_0001416g0070 Nicotiana tabacum HOM05D000004 ORTHO05D000002 9.4e-06 54.7 65 36.9
PSO170G4924 Papaver somniferum HOM05D000004 ORTHO05D000002 9.4e-06 54.7 58 43.1
SHI37684 Sapria himalayana HOM05D000004 ORTHO05D000002 9.4e-06 54.7 51 47.1
SHI40336 Sapria himalayana HOM05D000004 ORTHO05D000002 9.4e-06 54.7 51 47.1
SHI50774 Sapria himalayana HOM05D000004 ORTHO05D000002 9.4e-06 54.7 51 47.1
SHI51461 Sapria himalayana HOM05D000004 ORTHO05D000002 9.4e-06 54.7 51 47.1
SHI53605 Sapria himalayana HOM05D000004 ORTHO05D000002 9.4e-06 54.7 51 47.1


User provided reference genes

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