Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001450g0180 Nicotiana tabacum HOM05D003507 ORTHO05D004324 5.0e-235 817.4 409 100.0
Nitab4.5_0001659g0110 Nicotiana tabacum HOM05D003507 ORTHO05D004324 6.6e-211 737.3 407 91.9
Solyc11g008380.3 Solanum lycopersicum HOM05D003507 ORTHO05D004324 1.1e-205 719.9 407 88.7
Peaxi162Scf00145g01313 Petunia axillaris HOM05D003507 ORTHO05D004324 2.3e-195 685.6 407 86.5
Cc02_g10950 Coffea canephora HOM05D003507 ORTHO05D004324 4.4e-191 671.4 407 83.8
SGA_v2.0_scaffold62G21389 Striga asiatica HOM05D003507 ORTHO05D004324 1.7e-187 659.4 408 79.7
Dinv36393 Davidia involucrata HOM05D003507 ORTHO05D004324 4.7e-185 651.4 411 80.0
SalBow4G0138 Salvia bowleyana HOM05D003507 ORTHO05D004324 8.9e-184 647.1 408 78.9
Migut.F01958 Erythranthe guttata HOM05D003507 ORTHO05D004324 1.5e-183 646.4 408 78.7
MSTRG.9152 Avicennia marina HOM05D003507 ORTHO05D004324 3.4e-183 645.2 408 79.2
Lj2C20G5 Lonicera japonica HOM05D003507 ORTHO05D004324 3.4e-183 645.2 411 78.8
MSTRG.27484 Avicennia marina HOM05D003507 ORTHO05D004324 4.4e-183 644.8 408 78.9
Oeu013840.1 Olea europaea HOM05D003507 ORTHO05D004324 2.2e-182 642.5 479 70.1
HanXRQChr08g0218541 Helianthus annuus HOM05D003507 ORTHO05D004324 2.9e-182 642.1 410 78.3
Lsat_1_v5_gn_8_20780 Lactuca sativa HOM05D003507 ORTHO05D004324 6.4e-182 641.0 411 77.9
Rhsim03G0116200 Rhododendron simsii HOM05D003507 ORTHO05D004324 2.1e-180 636.0 409 77.5
Dinv31230 Davidia involucrata HOM05D003507 ORTHO05D004324 6.0e-180 634.4 411 77.1
Actinidia18606 Actinidia chinensis HOM05D003507 ORTHO05D004324 7.8e-180 634.0 411 77.4
GSVIVG01016222001 Vitis vinifera HOM05D003507 ORTHO05D004324 2.3e-179 632.5 406 79.8
ECA232G4763 Erigeron canadensis HOM05D003507 ORTHO05D004324 1.9e-178 629.4 413 77.0
MD07G1170100 Malus domestica HOM05D003507 ORTHO05D004324 3.3e-178 628.6 410 76.8
MD07G1170200 Malus domestica HOM05D003507 ORTHO05D004324 3.3e-178 628.6 410 76.8
CSS0014006 Camellia sinensis var. sinensis HOM05D003507 ORTHO05D004324 4.3e-178 628.2 410 77.3
CSS0018584 Camellia sinensis var. sinensis HOM05D003507 ORTHO05D004324 4.3e-178 628.2 410 77.3
MD01G1103300 Malus domestica HOM05D003507 ORTHO05D004324 9.5e-178 627.1 408 77.2
THA.LOC104816425 Tarenaya hassleriana HOM05D003507 ORTHO05D004324 8.1e-177 624.0 402 77.6
CANSAT56G3424 Cannabis sativa HOM05D003507 ORTHO05D004324 1.8e-176 622.9 409 76.5
MELO3C019820.2 Cucumis melo HOM05D003507 ORTHO05D004324 8.9e-176 620.5 407 76.7
CsaV3_6G036660 Cucumis sativus L. HOM05D003507 ORTHO05D004324 1.5e-175 619.8 407 76.7
Duzib128G1288 Durio zibethinus HOM05D003507 ORTHO05D004324 1.5e-175 619.8 409 77.8
Gohir.A06G168100 Gossypium hirsutum HOM05D003507 ORTHO05D004324 2.6e-175 619.0 412 76.5
COL.COLO4_17137 Corchorus olitorius HOM05D003507 ORTHO05D004324 3.4e-175 618.6 410 77.3
Gorai.010G205900 Gossypium raimondii HOM05D003507 ORTHO05D004324 4.4e-175 618.2 411 76.2
PGR142G1627 Punica granatum HOM05D003507 ORTHO05D004324 5.8e-175 617.8 409 76.0
THA.LOC104826896 Tarenaya hassleriana HOM05D003507 ORTHO05D004324 9.9e-175 617.1 406 76.8
Gohir.D06G175500 Gossypium hirsutum HOM05D003507 ORTHO05D004324 1.3e-174 616.7 410 75.9
Manes.07G133156 Manihot esculenta HOM05D003507 ORTHO05D004324 2.2e-174 615.9 411 75.7
Rhsim09G0148300 Rhododendron simsii HOM05D003507 ORTHO05D004324 2.2e-174 615.9 407 76.2
Prupe.2G209000 Prunus persica HOM05D003507 ORTHO05D004324 3.8e-174 615.1 410 75.9
Sed0010237 Sechium edule HOM05D003507 ORTHO05D004324 3.8e-174 615.1 407 75.7
RcHm_v2.0_Chr1g0362611 Rosa chinensis HOM05D003507 ORTHO05D004324 4.9e-174 614.8 410 76.1
RhsimUnG0185700 Rhododendron simsii HOM05D003507 ORTHO05D004324 1.1e-173 613.6 407 76.9
CiPaw.02G172300 Carya illinoinensis HOM05D003507 ORTHO05D004324 1.4e-173 613.2 410 76.8
HanXRQChr17g0564181 Helianthus annuus HOM05D003507 ORTHO05D004324 1.9e-173 612.8 397 77.3
Potri.010G226700 Populus trichocarpa HOM05D003507 ORTHO05D004324 4.2e-173 611.7 411 75.2
BcaC05g29472 Brassica carinata HOM05D003507 ORTHO05D004324 9.2e-173 610.5 410 74.4
C05p57790 Brassica napus HOM05D003507 ORTHO05D004324 9.2e-173 610.5 410 74.4
BolC5t34436H Brassica oleracea HOM05D003507 ORTHO05D004324 9.2e-173 610.5 410 74.4
ClCG08G007670 Citrullus lanatus HOM05D003507 ORTHO05D004324 9.2e-173 610.5 398 76.9
Nn2g13785 Nelumbo nucifera HOM05D003507 ORTHO05D004324 9.2e-173 610.5 409 75.3
CARHR084850 Cardamine hirsuta HOM05D003507 ORTHO05D004324 1.2e-172 610.1 405 75.1
Duzib114G0668 Durio zibethinus HOM05D003507 ORTHO05D004324 1.6e-172 609.8 411 75.7
Thhalv10020293m.g Eutrema salsugineum HOM05D003507 ORTHO05D004324 1.6e-172 609.8 404 75.2
TAR623G1746 Trochodendron aralioides HOM05D003507 ORTHO05D004324 1.6e-172 609.8 409 75.3
CiPaw.01G268800 Carya illinoinensis HOM05D003507 ORTHO05D004324 2.7e-172 609.0 408 75.5
Manes.10G050100 Manihot esculenta HOM05D003507 ORTHO05D004324 2.7e-172 609.0 411 74.0
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 3.5e-172 608.6 407 74.0
BraA05t22670Z Brassica rapa HOM05D003507 ORTHO05D004324 3.5e-172 608.6 410 74.1
DCAR_019087 Daucus carota HOM05D003507 ORTHO05D004324 3.5e-172 608.6 396 76.8
vmacro07121 Vaccinium macrocarpon HOM05D003507 ORTHO05D004324 3.5e-172 608.6 443 70.4
A05p38780 Brassica napus HOM05D003507 ORTHO05D004324 4.6e-172 608.2 410 74.1
Sc20g0001600 Simmondsia chinensis HOM05D003507 ORTHO05D004324 4.6e-172 608.2 408 75.7
Carub.0003s0955 Capsella rubella HOM05D003507 ORTHO05D004324 1.0e-171 607.1 404 74.5
Gohir.A05G411300 Gossypium hirsutum HOM05D003507 ORTHO05D004324 1.0e-171 607.1 409 76.0
Haze_16857 Corylus avellana HOM05D003507 ORTHO05D004324 1.7e-171 606.3 410 75.1
FAN01G0276 Fragaria x ananassa HOM05D003507 ORTHO05D004324 1.7e-171 606.3 410 74.9
Gorai.012G005900 Gossypium raimondii HOM05D003507 ORTHO05D004324 3.0e-171 605.5 408 76.0
MBI18_g28045_MAGBIO Magnolia biondii HOM05D003507 ORTHO05D004324 3.0e-171 605.5 410 74.6
QL08p054391 Quercus lobata HOM05D003507 ORTHO05D004324 3.9e-171 605.1 409 73.6
Sabra10G0175000 Salix brachista HOM05D003507 ORTHO05D004324 3.9e-171 605.1 411 74.5
PSO210G4234 Papaver somniferum HOM05D003507 ORTHO05D004324 5.1e-171 604.7 411 75.7
Thecc.10G083100 Theobroma cacao HOM05D003507 ORTHO05D004324 5.1e-171 604.7 410 76.8
FAN10G1468 Fragaria x ananassa HOM05D003507 ORTHO05D004324 8.7e-171 604.0 410 74.6
Sp3g08640 Schrenkiella parvula HOM05D003507 ORTHO05D004324 8.7e-171 604.0 407 73.2
FAN03G2323 Fragaria x ananassa HOM05D003507 ORTHO05D004324 1.1e-170 603.6 410 74.6
QL08p054526 Quercus lobata HOM05D003507 ORTHO05D004324 1.1e-170 603.6 409 73.3
Cfa001677 Carpinus fangiana HOM05D003507 ORTHO05D004324 1.5e-170 603.2 410 74.9
Aa31LG1G21080 Aethionema arabicum HOM05D003507 ORTHO05D004324 3.3e-170 602.1 406 73.4
PSO210G6851 Papaver somniferum HOM05D003507 ORTHO05D004324 3.3e-170 602.1 411 75.4
FAN06G1568 Fragaria x ananassa HOM05D003507 ORTHO05D004324 4.3e-170 601.7 410 74.4
FAN06G2975 Fragaria x ananassa HOM05D003507 ORTHO05D004324 4.3e-170 601.7 410 74.4
TWI63G0759 Tripterygium wilfordii HOM05D003507 ORTHO05D004324 4.3e-170 601.7 409 75.6
BcaB04g21215 Brassica carinata HOM05D003507 ORTHO05D004324 5.6e-170 601.3 406 73.2
FAN10G2698 Fragaria x ananassa HOM05D003507 ORTHO05D004324 9.6e-170 600.5 408 74.3
Gohir.D04G004700 Gossypium hirsutum HOM05D003507 ORTHO05D004324 9.6e-170 600.5 411 75.7
TWI38G0486 Tripterygium wilfordii HOM05D003507 ORTHO05D004324 9.6e-170 600.5 409 75.6
AT3G10370 Arabidopsis thaliana HOM05D003507 ORTHO05D004324 1.2e-169 600.1 404 73.5
Eucgr.G02866 Eucalyptus grandis HOM05D003507 ORTHO05D004324 1.6e-169 599.7 408 75.2
FvH4_7g18820 Fragaria vesca HOM05D003507 ORTHO05D004324 1.6e-169 599.7 410 74.1
Sed0023455 Sechium edule HOM05D003507 ORTHO05D004324 1.6e-169 599.7 407 74.2
Medtr1g050720 Medicago truncatula HOM05D003507 ORTHO05D004324 2.1e-169 599.4 405 75.1
BraA01t04259Z Brassica rapa HOM05D003507 ORTHO05D004324 6.2e-169 597.8 406 72.7
A01p41890 Brassica napus HOM05D003507 ORTHO05D004324 1.4e-168 596.7 406 72.4
TPR.G7608 Trifolium pratense HOM05D003507 ORTHO05D004324 1.8e-168 596.3 405 74.6
THA.LOC104824233 Tarenaya hassleriana HOM05D003507 ORTHO05D004324 3.1e-168 595.5 405 73.8
Ca_11760_v3 Cicer arietinum L. HOM05D003507 ORTHO05D004324 5.3e-168 594.7 405 74.3
Phvul.007G245200 Phaseolus vulgaris HOM05D003507 ORTHO05D004324 5.3e-168 594.7 405 73.6
ECA233G4141 Erigeron canadensis HOM05D003507 ORTHO05D004324 6.9e-168 594.3 354 83.6
Glyma.02G165500 Glycine max HOM05D003507 ORTHO05D004324 1.5e-167 593.2 407 74.2
Sc09g0006070 Simmondsia chinensis HOM05D003507 ORTHO05D004324 2.0e-167 592.8 383 77.8
Aqoxy1G01151 Aquilegia oxysepala HOM05D003507 ORTHO05D004324 2.2e-166 589.3 412 72.8
arahy.Tifrunner.gnm1.ann1.X5QL3X Arachis hypogaea HOM05D003507 ORTHO05D004324 2.2e-166 589.3 410 72.0
SHI08893 Sapria himalayana HOM05D003507 ORTHO05D004324 3.2e-165 585.5 409 73.6
VMungo0720G1021 Vigna mungo HOM05D003507 ORTHO05D004324 4.2e-165 585.1 407 73.2
Ca_10543_v3 Cicer arietinum L. HOM05D003507 ORTHO05D004324 1.2e-164 583.6 409 70.9
Hund22747 Selenicereus undatus HOM05D003507 ORTHO05D004324 2.1e-164 582.8 410 72.9
BolC1t05405H Brassica oleracea HOM05D003507 ORTHO05D004324 2.7e-164 582.4 368 77.4
Psat6g180000 Pisum sativum HOM05D003507 ORTHO05D004324 4.6e-164 581.6 406 71.4
ATR0219G019 Amborella trichopoda HOM05D003507 ORTHO05D004324 1.0e-163 580.5 406 71.7
Lj5g0027490 Lotus japonicus HOM05D003507 ORTHO05D004324 6.6e-163 577.8 408 71.3
AUR62013829 Chenopodium quinoa HOM05D003507 ORTHO05D004324 2.5e-162 575.9 444 67.1
A07p45220 Brassica napus HOM05D003507 ORTHO05D004324 7.3e-162 574.3 397 73.0
Glyma.20G183100 Glycine max HOM05D003507 ORTHO05D004324 7.3e-162 574.3 405 71.1
C06p54060 Brassica napus HOM05D003507 ORTHO05D004324 1.3e-161 573.5 397 73.0
VMungo0720G1977 Vigna mungo HOM05D003507 ORTHO05D004324 4.8e-161 571.6 407 70.3
Zm00001eb419210 Zea mays HOM05D003507 ORTHO05D004324 6.2e-161 571.2 402 71.4
BolC6t40419H Brassica oleracea HOM05D003507 ORTHO05D004324 8.1e-161 570.9 397 72.8
BraA07t32025Z Brassica rapa HOM05D003507 ORTHO05D004324 1.1e-160 570.5 397 72.8
EL10Ac1g02015 Beta vulgaris HOM05D003507 ORTHO05D004324 1.4e-160 570.1 406 71.2
Lsat_1_v5_gn_9_70220 Lactuca sativa HOM05D003507 ORTHO05D004324 1.4e-160 570.1 411 71.8
Glyma.10G207700 Glycine max HOM05D003507 ORTHO05D004324 6.9e-160 567.8 405 70.1
Ah.11g040810 Amaranthus hybridus HOM05D003507 ORTHO05D004324 1.2e-159 567.0 406 71.4
HPP92_008484 Vanilla planifolia HOM05D003507 ORTHO05D004324 3.4e-159 565.5 406 69.5
unitig_88.g27816 Utricularia gibba HOM05D003507 ORTHO05D004324 5.8e-159 564.7 403 72.0
TPR.G38613 Trifolium pratense HOM05D003507 ORTHO05D004324 7.6e-159 564.3 406 69.7
Lalb_Chr02g0152061 Lupinus albus HOM05D003507 ORTHO05D004324 1.3e-158 563.5 407 70.8
arahy.Tifrunner.gnm1.ann1.8GLB3P Arachis hypogaea HOM05D003507 ORTHO05D004324 4.9e-158 561.6 407 69.0
arahy.Tifrunner.gnm1.ann1.TAZB16 Arachis hypogaea HOM05D003507 ORTHO05D004324 4.9e-158 561.6 407 69.0
Phvul.007G099000 Phaseolus vulgaris HOM05D003507 ORTHO05D004324 4.9e-158 561.6 407 69.8
AUR62036906 Chenopodium quinoa HOM05D003507 ORTHO05D004324 3.0e-155 552.4 345 78.0
Mapoly0025s0008 Marchantia polymorpha HOM05D003507 ORTHO05D004324 3.5e-148 528.9 400 66.5
CDE02G2605 Ceratophyllum demersum HOM05D003507 ORTHO05D004324 2.5e-146 522.7 527 54.6
AL491U10020 Arabidopsis lyrata HOM05D003507 ORTHO05D004324 1.6e-145 520.0 404 67.3
AagrBONN_evm.TU.Sc2ySwM_117.1947 Anthoceros agrestis HOM05D003507 ORTHO05D004324 3.7e-145 518.8 404 66.3
Pp3c4_15510 Physcomitrium patens HOM05D003507 ORTHO05D004324 4.0e-144 515.4 353 73.7
SMO334G0124 Selaginella moellendorffii HOM05D003507 ORTHO05D004324 9.0e-144 514.2 390 66.7
BcaNung06834 Brassica carinata HOM05D003507 ORTHO05D004324 3.1e-136 489.2 410 63.9
Nn6g35287 Nelumbo nucifera HOM05D003507 ORTHO05D004324 3.1e-136 489.2 409 63.8
TAR627G0142 Trochodendron aralioides HOM05D003507 ORTHO05D004324 1.2e-135 487.3 371 64.7
Aqoxy1G02537 Aquilegia oxysepala HOM05D003507 ORTHO05D004324 2.0e-135 486.5 395 61.8
vmacro04843 Vaccinium macrocarpon HOM05D003507 ORTHO05D004324 3.4e-135 485.7 275 83.3
PSO541G4906 Papaver somniferum HOM05D003507 ORTHO05D004324 7.7e-135 484.6 363 64.7
arahy.Tifrunner.gnm1.ann1.WAL6D9 Arachis hypogaea HOM05D003507 ORTHO05D004324 5.0e-134 481.9 272 82.4
Aqoxy1G02532 Aquilegia oxysepala HOM05D003507 ORTHO05D004324 6.5e-134 481.5 394 61.4
AL3G21700 Arabidopsis lyrata HOM05D003507 ORTHO05D004324 3.6e-132 475.7 404 62.1
CiPaw.14G115300 Carya illinoinensis HOM05D003507 ORTHO05D004324 2.6e-127 459.5 407 62.4
CAN.G1121.6 Capsicum annuum HOM05D003507 ORTHO05D004324 6.5e-126 454.9 227 96.5
MBI17_g46352_MAGBIO Magnolia biondii HOM05D003507 ORTHO05D004324 6.5e-126 454.9 352 65.3
Oeu051137.1 Olea europaea HOM05D003507 ORTHO05D004324 4.7e-124 448.7 297 78.8
Cpa.g.sc2869.2 Carica papaya HOM05D003507 ORTHO05D004324 7.4e-114 414.8 226 85.4
Cpa.g.sc3863.1 Carica papaya HOM05D003507 ORTHO05D004324 6.5e-110 401.7 294 71.8
Psat6g130440 Pisum sativum HOM05D003507 ORTHO05D004324 4.2e-109 399.1 227 82.4
MCO16G042 Micromonas commoda HOM05D003507 ORTHO05D004324 2.3e-94 350.1 360 51.1
ATR0680G388 Amborella trichopoda HOM05D003507 ORTHO05D004324 6.6e-86 322.0 321 56.4
Haze_26728 Corylus avellana HOM05D003507 ORTHO05D004324 2.5e-85 320.1 352 49.1
Cfa022775 Carpinus fangiana HOM05D003507 ORTHO05D004324 5.6e-85 318.9 344 50.3
CBR_g56910 Chara braunii HOM05D003507 ORTHO05D004324 3.2e-80 303.1 375 44.0
CBR_g49884 Chara braunii HOM05D003507 ORTHO05D000048 9.8e-74 281.6 212 64.2
Actinidia06739 Actinidia chinensis HOM05D003507 ORTHO05D004324 8.3e-73 278.5 153 86.9
SMO361G0200 Selaginella moellendorffii HOM05D003507 ORTHO05D004324 3.5e-71 273.1 172 75.6
CSS0003260 Camellia sinensis var. sinensis HOM05D003507 ORTHO05D004324 1.2e-68 264.6 156 81.4
MBI17_g03745_MAGBIO Magnolia biondii HOM05D003507 ORTHO05D004324 6.8e-67 258.8 161 73.9
CSS0013186 Camellia sinensis var. sinensis HOM05D003507 ORTHO05D004324 9.9e-66 255.0 143 85.3
Os04g0224900 Oryza sativa ssp. japonica HOM05D003507 ORTHO05D004324 6.6e-62 242.3 138 83.3
CSS0002523 Camellia sinensis var. sinensis HOM05D003507 ORTHO05D004324 1.2e-60 238.0 157 73.2
Cre13.g577450 Chlamydomonas reinhardtii HOM05D003507 ORTHO05D004324 1.2e-58 231.5 466 34.5
SEGI_22983 Sequoiadendron giganteum HOM05D003507 ORTHO05D004324 3.3e-53 213.4 111 88.3
CSS0038211 Camellia sinensis var. sinensis HOM05D003507 ORTHO05D004324 9.9e-50 201.8 157 65.6
CSS0016001 Camellia sinensis var. sinensis HOM05D003507 ORTHO05D004324 4.6e-47 193.0 157 63.1
BcaNung06282 Brassica carinata HOM05D003507 ORTHO05D004324 3.9e-38 163.3 80 93.8
Atru.chr12.838 Acer truncatum HOM05D003507 ORTHO05D008357 1.1e-37 161.8 80 92.5
Pp3s42_220 Physcomitrium patens HOM05D003206 ORTHO05D310700 2.6e-34 150.6 346 31.2
arahy.Tifrunner.gnm1.ann1.2YR0GK Arachis hypogaea HOM05D003507 ORTHO05D021543 2.0e-26 124.4 118 60.2
BcaC05g29473 Brassica carinata HOM05D003507 ORTHO05D021543 2.0e-26 124.4 116 60.3
CDE09G1104 Ceratophyllum demersum HOM05D003507 ORTHO05D004324 3.8e-25 120.2 159 45.9
Dinv22443 Davidia involucrata HOM05D003507 ORTHO05D182987 1.8e-22 111.3 134 51.5
BcaNung06832 Brassica carinata HOM05D003507 ORTHO05D004324 1.1e-21 108.6 60 83.3
TPR.G40483 Trifolium pratense HOM05D003507 ORTHO05D004324 7.7e-18 95.9 46 93.5
Lalb_Chr01g0010251 Lupinus albus HOM05D003507 ORTHO05D021543 2.2e-17 94.4 64 73.4
Os04g0225001 Oryza sativa ssp. japonica HOM05D003507 ORTHO05D021543 1.1e-16 92.0 56 82.1
A06p14850 Brassica napus HOM05D003507 ORTHO05D021543 8.8e-14 82.4 56 75.0
Lalb_Chr01g0010241 Lupinus albus HOM05D003507 ORTHO05D004324 2.2e-09 67.8 37 78.4


User provided reference genes

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