Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001410g0060 Nicotiana tabacum HOM05D004839 ORTHO05D006012 3.5e-283 978.0 651 100.0
Nitab4.5_0001485g0220 Nicotiana tabacum HOM05D004839 ORTHO05D006012 1.5e-241 839.7 562 95.4
CAN.G479.17 Capsicum annuum HOM05D004839 ORTHO05D006012 8.0e-219 764.2 673 77.3
Solyc03g115240.4 Solanum lycopersicum HOM05D004839 ORTHO05D006012 3.3e-217 758.8 654 78.3
Sopen03g034280 Solanum pennellii HOM05D004839 ORTHO05D006012 2.1e-211 739.6 517 83.4
Peaxi162Scf00201g10021 Petunia axillaris HOM05D004839 ORTHO05D006012 2.6e-209 732.6 547 88.5
Dinv17400 Davidia involucrata HOM05D004839 ORTHO05D006012 4.4e-201 705.3 658 69.8
Dinv10521 Davidia involucrata HOM05D004839 ORTHO05D006012 1.8e-194 683.3 553 76.5
PGR044G2204 Punica granatum HOM05D004839 ORTHO05D006012 8.0e-187 657.9 658 65.8
Atru.chr9.403 Acer truncatum HOM05D004839 ORTHO05D006012 1.8e-186 656.8 656 70.3
Cc04_g13220 Coffea canephora HOM05D004839 ORTHO05D006012 2.0e-185 653.3 662 66.5
MSTRG.11357 Avicennia marina HOM05D004839 ORTHO05D006012 2.2e-184 649.8 656 66.3
QL10p019188 Quercus lobata HOM05D004839 ORTHO05D006012 4.9e-184 648.7 664 63.9
TAR622G0763 Trochodendron aralioides HOM05D004839 ORTHO05D006012 1.9e-183 646.7 657 66.7
Haze_07703 Corylus avellana HOM05D004839 ORTHO05D006012 1.2e-182 644.0 654 68.0
Ciclev10019267m.g Citrus clementina HOM05D004839 ORTHO05D006012 3.5e-182 642.5 661 65.8
Duzib205G0813 Durio zibethinus HOM05D004839 ORTHO05D006012 7.8e-182 641.3 657 67.0
Actinidia25779 Actinidia chinensis HOM05D004839 ORTHO05D006012 1.9e-180 636.7 659 67.4
SalBow5G5272 Salvia bowleyana HOM05D004839 ORTHO05D006012 4.3e-180 635.6 661 64.4
Nn4g23407 Nelumbo nucifera HOM05D004839 ORTHO05D006012 1.2e-179 634.0 654 66.8
MSTRG.22981 Avicennia marina HOM05D004839 ORTHO05D006012 2.1e-179 633.3 656 72.3
Migut.D01694 Erythranthe guttata HOM05D004839 ORTHO05D006012 2.1e-179 633.3 660 63.8
CSS0002450 Camellia sinensis var. sinensis HOM05D004839 ORTHO05D006012 1.3e-176 624.0 656 68.4
TAR374G0643 Trochodendron aralioides HOM05D004839 ORTHO05D006012 1.7e-176 623.6 659 63.7
Gorai.008G198100 Gossypium raimondii HOM05D004839 ORTHO05D006012 1.2e-174 617.5 658 64.3
Gohir.D12G184700 Gossypium hirsutum HOM05D004839 ORTHO05D006012 1.7e-173 613.6 658 64.0
Eucgr.K02520 Eucalyptus grandis HOM05D004839 ORTHO05D006012 2.3e-173 613.2 661 62.0
TWI81G0494 Tripterygium wilfordii HOM05D004839 ORTHO05D006012 3.0e-173 612.8 661 64.0
CiPaw.11G051800 Carya illinoinensis HOM05D004839 ORTHO05D006012 3.9e-173 612.5 656 66.5
Gohir.A12G181900 Gossypium hirsutum HOM05D004839 ORTHO05D006012 1.1e-172 610.9 658 64.1
Manes.14G084900 Manihot esculenta HOM05D004839 ORTHO05D006012 8.1e-171 604.7 654 61.6
Glyma.04G163400 Glycine max HOM05D004839 ORTHO05D006012 1.6e-166 590.5 524 69.7
Manes.06G085750 Manihot esculenta HOM05D004839 ORTHO05D006012 2.1e-166 590.1 707 57.9
Thecc.03G099900 Theobroma cacao HOM05D004839 ORTHO05D006012 2.3e-165 586.6 512 67.6
Glyma.06G202100 Glycine max HOM05D004839 ORTHO05D006012 5.1e-165 585.5 545 65.7
Lj1g0002650 Lotus japonicus HOM05D004839 ORTHO05D006012 6.6e-165 585.1 516 66.3
Prupe.5G203800 Prunus persica HOM05D004839 ORTHO05D006012 1.9e-164 583.6 518 67.2
Lj5A104T41 Lonicera japonica HOM05D004839 ORTHO05D006012 4.3e-164 582.4 654 57.5
Sabra12G0046900 Salix brachista HOM05D004839 ORTHO05D006012 1.5e-161 573.9 664 58.1
Actinidia04835 Actinidia chinensis HOM05D004839 ORTHO05D006012 2.0e-161 573.5 391 77.5
Aqoxy3G03618 Aquilegia oxysepala HOM05D004839 ORTHO05D006012 3.4e-161 572.8 655 63.4
Hund02595 Selenicereus undatus HOM05D004839 ORTHO05D006012 4.4e-161 572.4 704 61.6
EL10Ac5g11115 Beta vulgaris HOM05D004839 ORTHO05D006012 5.8e-161 572.0 657 60.6
Oeu001010.1 Olea europaea HOM05D004839 ORTHO05D006012 5.8e-161 572.0 618 58.4
arahy.Tifrunner.gnm1.ann1.PN7U9Z Arachis hypogaea HOM05D004839 ORTHO05D006012 7.6e-161 571.6 668 65.6
arahy.Tifrunner.gnm1.ann1.8FG0EB Arachis hypogaea HOM05D004839 ORTHO05D006012 1.4e-159 567.4 517 65.8
Lsat_1_v5_gn_1_13541 Lactuca sativa HOM05D004839 ORTHO05D006012 1.4e-159 567.4 545 62.4
Sc04g0004870 Simmondsia chinensis HOM05D004839 ORTHO05D006012 2.4e-159 566.6 661 55.8
AUR62008513 Chenopodium quinoa HOM05D004839 ORTHO05D006012 5.4e-159 565.5 524 63.4
MBI16_g41829_MAGBIO Magnolia biondii HOM05D004839 ORTHO05D006012 2.1e-158 563.5 523 66.3
Potri.012G065600 Populus trichocarpa HOM05D004839 ORTHO05D006012 4.6e-158 562.4 511 66.9
AUR62021577 Chenopodium quinoa HOM05D004839 ORTHO05D006012 3.9e-157 559.3 524 63.7
GSVIVG01007883001 Vitis vinifera HOM05D004839 ORTHO05D006012 1.5e-156 557.4 518 68.7
HanXRQChr05g0157271 Helianthus annuus HOM05D004839 ORTHO05D006012 1.9e-156 557.0 678 59.3
MD14G1210500 Malus domestica HOM05D004839 ORTHO05D006012 1.9e-156 557.0 518 64.5
VMungo1309G1059 Vigna mungo HOM05D004839 ORTHO05D006012 1.9e-156 557.0 526 67.9
FvH4_5g14030 Fragaria vesca HOM05D004839 ORTHO05D006012 4.3e-156 555.8 663 59.6
FAN08G2012 Fragaria x ananassa HOM05D004839 ORTHO05D006012 5.6e-156 555.4 662 59.1
Ah.11g047930 Amaranthus hybridus HOM05D004839 ORTHO05D006012 1.3e-155 554.3 666 57.8
THA.LOC104818342 Tarenaya hassleriana HOM05D004839 ORTHO05D006012 6.2e-155 552.0 658 60.0
ClCG04G011890 Citrullus lanatus HOM05D004839 ORTHO05D006012 2.4e-154 550.1 525 65.0
Lsat_1_v5_gn_5_23161 Lactuca sativa HOM05D004839 ORTHO05D006012 1.2e-153 547.7 666 56.3
SGA_v2.0_scaffold114G31924 Striga asiatica HOM05D004839 ORTHO05D006012 1.7e-152 543.9 698 52.6
DCAR_023142 Daucus carota HOM05D004839 ORTHO05D006012 2.9e-152 543.1 572 61.5
Lalb_Chr07g0184911 Lupinus albus HOM05D004839 ORTHO05D006012 6.4e-152 542.0 674 57.3
Lalb_Chr13g0296121 Lupinus albus HOM05D004839 ORTHO05D006012 1.1e-151 541.2 418 69.9
CDE04G3432 Ceratophyllum demersum HOM05D004839 ORTHO05D006012 7.1e-151 538.5 687 59.8
ECA246G0121 Erigeron canadensis HOM05D004839 ORTHO05D006012 9.3e-151 538.1 654 55.8
RcHm_v2.0_Chr7g0182791 Rosa chinensis HOM05D004839 ORTHO05D006012 2.1e-150 537.0 660 61.1
TPR.G11937 Trifolium pratense HOM05D004839 ORTHO05D006012 6.0e-150 535.4 519 66.9
MELO3C002019.2 Cucumis melo HOM05D004839 ORTHO05D006012 1.3e-149 534.3 525 63.2
MD06G1201400 Malus domestica HOM05D004839 ORTHO05D006012 8.7e-149 531.6 417 71.0
Phvul.009G192800 Phaseolus vulgaris HOM05D004839 ORTHO05D006012 2.5e-148 530.0 416 70.0
Ca_02963_v3 Cicer arietinum L. HOM05D004839 ORTHO05D006012 3.3e-148 529.6 494 68.4
unitig_749.g13436 Utricularia gibba HOM05D004839 ORTHO05D006012 1.4e-146 524.2 548 56.9
Sed0023482 Sechium edule HOM05D004839 ORTHO05D006012 1.8e-146 523.9 438 70.1
CsaV3_1G005900 Cucumis sativus L. HOM05D000422 ORTHO05D003570 3.1e-146 523.1 517 63.4
Sed0026784 Sechium edule HOM05D004839 ORTHO05D006012 6.9e-146 521.9 520 67.3
PSO478G1197 Papaver somniferum HOM05D004839 ORTHO05D006012 6.0e-142 508.8 580 60.7
Psat0s569g0080 Pisum sativum HOM05D004839 ORTHO05D006012 1.8e-141 507.3 514 65.2
FAN13G1538 Fragaria x ananassa HOM05D004839 ORTHO05D006012 3.0e-141 506.5 661 50.7
PSO017G5800 Papaver somniferum HOM05D004839 ORTHO05D006012 7.4e-140 501.9 597 59.1
Medtr3g024380 Medicago truncatula HOM05D004839 ORTHO05D006012 4.8e-139 499.2 489 66.3
vmacro16504 Vaccinium macrocarpon HOM05D004839 ORTHO05D006012 3.4e-137 493.0 581 53.2
HPP92_018601 Vanilla planifolia HOM05D004839 ORTHO05D006012 7.6e-137 491.9 525 58.3
Medtr3g024360 Medicago truncatula HOM05D004839 ORTHO05D006012 1.3e-136 491.1 489 65.6
Aa31LG11G2200 Aethionema arabicum HOM05D004839 ORTHO05D006012 8.5e-128 461.8 680 57.9
Lalb_Chr07g0184901 Lupinus albus HOM05D004839 ORTHO05D006012 5.5e-127 459.1 508 55.9
Carub.0008s2182 Capsella rubella HOM05D004839 ORTHO05D006012 1.2e-126 458.0 525 60.2
ATR0064G044 Amborella trichopoda HOM05D004839 ORTHO05D006012 2.3e-125 453.8 352 69.9
GSVIVG01007906001 Vitis vinifera HOM05D004839 ORTHO05D006012 8.8e-125 451.8 383 69.2
Thhalv10003808m.g Eutrema salsugineum HOM05D004839 ORTHO05D006012 2.4e-122 443.7 659 57.7
AT5G61150 Arabidopsis thaliana HOM05D004839 ORTHO05D006012 5.3e-122 442.6 662 58.0
Zm00001eb298660 Zea mays HOM05D004839 ORTHO05D006012 1.7e-120 437.6 435 58.6
A09p07230 Brassica napus HOM05D004839 ORTHO05D006012 3.2e-119 433.3 662 54.2
C09p08080 Brassica napus HOM05D004839 ORTHO05D006012 5.5e-119 432.6 662 56.5
BolC9t53722H Brassica oleracea HOM05D004839 ORTHO05D006012 5.5e-119 432.6 662 57.1
BcaC04g23462 Brassica carinata HOM05D004839 ORTHO05D006012 7.9e-118 428.7 662 56.2
Sp2g24400 Schrenkiella parvula HOM05D004839 ORTHO05D006012 6.7e-117 425.6 659 53.3
Zm00001eb118140 Zea mays HOM05D004839 ORTHO05D006012 4.4e-116 422.9 435 57.5
BolC2t12188H Brassica oleracea HOM05D004839 ORTHO05D006012 2.8e-115 420.2 530 58.3
AL8G37800 Arabidopsis lyrata HOM05D004839 ORTHO05D006012 5.3e-114 416.0 669 56.1
Os12g0579000 Oryza sativa ssp. japonica HOM05D004839 ORTHO05D006012 6.9e-114 415.6 411 57.9
COL.COLO4_37593 Corchorus olitorius HOM05D004839 ORTHO05D006012 5.9e-113 412.5 654 43.9
SEGI_03099 Sequoiadendron giganteum HOM05D004839 ORTHO05D006012 2.9e-112 410.2 545 57.2
C02p61390 Brassica napus HOM05D004839 ORTHO05D006012 4.2e-111 406.4 665 56.4
CARHR274840 Cardamine hirsuta HOM05D004839 ORTHO05D006012 1.6e-110 404.4 652 55.2
BraA09t36373Z Brassica rapa HOM05D004839 ORTHO05D006012 2.2e-107 394.0 540 58.7
A02p41460 Brassica napus HOM05D004839 ORTHO05D006012 5.7e-100 369.4 664 50.5
Gohir.D13G091100 Gossypium hirsutum HOM05D004839 ORTHO05D006012 2.2e-96 357.5 380 61.6
Gohir.D07G141700 Gossypium hirsutum HOM05D004839 ORTHO05D006012 6.5e-96 355.9 380 61.3
Gohir.D12G082100 Gossypium hirsutum HOM05D004839 ORTHO05D006012 6.5e-96 355.9 380 61.6
Gohir.D12G082302 Gossypium hirsutum HOM05D004839 ORTHO05D006012 6.5e-96 355.9 380 61.3
Nn030s41597 Nelumbo nucifera HOM05D004839 ORTHO05D006012 9.4e-95 352.1 324 66.7
Mapoly0001s0516 Marchantia polymorpha HOM05D004839 ORTHO05D006012 2.0e-92 344.4 342 55.6
Os07g0109600 Oryza sativa ssp. japonica HOM05D004839 ORTHO05D006012 2.2e-91 340.9 314 59.9
Pp3c14_2440 Physcomitrium patens HOM05D004839 ORTHO05D006012 4.5e-89 333.2 355 52.7
Os03g0756500 Oryza sativa ssp. japonica HOM05D004839 ORTHO05D006012 1.7e-88 331.3 336 53.6
AagrBONN_evm.TU.Sc2ySwM_228.780 Anthoceros agrestis HOM05D004839 ORTHO05D006012 1.9e-87 327.8 316 57.3
MBI05_g39010_MAGBIO Magnolia biondii HOM05D004839 ORTHO05D006012 1.2e-84 318.5 422 54.0
SGA_v2.0_scaffold313G48307 Striga asiatica HOM05D004839 ORTHO05D006012 3.2e-74 283.9 495 43.2
MSTRG.22984 Avicennia marina HOM05D004839 ORTHO05D006012 1.0e-72 278.9 302 52.0
Migut.I00327 Erythranthe guttata HOM05D004839 ORTHO05D006012 8.6e-72 275.8 491 41.3
SMO301G0010 Selaginella moellendorffii HOM05D004839 ORTHO05D006012 1.1e-71 275.4 393 46.8
Oeu001821.1 Olea europaea HOM05D004839 ORTHO05D006012 1.2e-60 238.8 295 49.2
CBR_g54910 Chara braunii HOM05D004839 ORTHO05D000002 9.2e-58 229.2 330 45.8
RhsimUnG0229200 Rhododendron simsii HOM05D004839 ORTHO05D006012 9.9e-52 209.1 282 56.4
MBI05_g05675_MAGBIO Magnolia biondii HOM05D004839 ORTHO05D006012 4.6e-49 200.3 513 37.8
arahy.Tifrunner.gnm1.ann1.YGY8HB Arachis hypogaea HOM05D010000 ORTHO05D006012 3.1e-45 187.6 167 61.7
MD06G1201100 Malus domestica HOM05D004839 ORTHO05D006012 2.9e-43 181.0 136 75.0
Lsat_1_v5_gn_3_57821 Lactuca sativa HOM05D004839 ORTHO05D006012 3.1e-37 161.0 103 74.8
Oeu022173.1 Olea europaea HOM05D004839 ORTHO05D006012 1.3e-32 145.6 282 37.2
Oeu008253.1 Olea europaea HOM05D004839 ORTHO05D006012 6.7e-32 143.3 138 63.0
Gohir.D01G045700 Gossypium hirsutum HOM05D004839 ORTHO05D006012 5.6e-31 140.2 272 50.0
SalBow5G1942 Salvia bowleyana HOM05D004839 ORTHO05D006012 7.6e-28 129.8 267 37.5
MCO04G392 Micromonas commoda HOM05D004839 ORTHO05D006012 4.9e-27 127.1 331 32.3
Cre16.g694204 Chlamydomonas reinhardtii HOM05D004839 ORTHO05D006012 5.1e-24 117.1 258 31.0
arahy.Tifrunner.gnm1.ann1.WE96GU Arachis hypogaea HOM05D004839 ORTHO05D006012 8.2e-22 109.8 130 54.6
MD06G1201000 Malus domestica HOM05D004839 ORTHO05D006012 6.0e-17 93.6 63 73.0
Peaxi162Scf00201g00231 Petunia axillaris HOM05D004839 ORTHO05D006012 1.3e-16 92.4 53 79.2
Cpa.g.c41089 Carica papaya HOM05D004839 ORTHO05D006012 1.9e-15 88.6 90 51.1
Peaxi162Scf00201g00230 Petunia axillaris HOM05D004839 ORTHO05D006012 6.3e-14 83.6 54 77.8
Cpa.g.c34487 Carica papaya HOM05D004839 ORTHO05D006012 2.0e-12 78.6 163 65.0
MD06G1200900 Malus domestica HOM05D004839 ORTHO05D006012 7.7e-12 76.6 97 56.7
Gorai.011G032300 Gossypium raimondii HOM05D004839 ORTHO05D006012 2.2e-06 58.5 147 42.9
FAN18G1977 Fragaria x ananassa HOM05D004839 ORTHO05D006012 3.7e-06 57.8 217 49.8
arahy.Tifrunner.gnm1.ann1.EPA5QP Arachis hypogaea HOM05D004839 ORTHO05D004485 4.8e-06 57.4 43 62.8


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